RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 KIF6Q6ZMV9 814 aa16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 ANKRD13DQ6ZTN6 518 aa16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 ARHGAP45Q92619 1136 aa16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 SRP68Q9UHB9 627 aaKnown RBP16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 NOB1Q9ULX3 412 aaKnown RBP16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 TUBGCP6Q96RT7 1819 aa16.15■□□□□ 0.18
CHMP2A-201ENST00000312547 ADCY9O60503 1353 aa16.14■□□□□ 0.17
CHMP2A-201ENST00000312547 DDX58O95786 925 aaKnown RBP16.14■□□□□ 0.17
CHMP2A-201ENST00000312547 FKBP5Q13451 457 aaPredicted RBP16.14■□□□□ 0.17
CHMP2A-201ENST00000312547 PI4KAP2A4QPH2 592 aa16.13■□□□□ 0.17
CHMP2A-201ENST00000312547 HLFQ16534 295 aa16.13■□□□□ 0.17
CHMP2A-201ENST00000312547 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
CHMP2A-201ENST00000312547 PI4KAP1Q8N8J0 262 aa16.13■□□□□ 0.17
CHMP2A-201ENST00000312547 PDGFDQ9GZP0 370 aaPredicted RBP16.13■□□□□ 0.17
CHMP2A-201ENST00000312547 ZBTB3Q9H5J0 574 aa16.13■□□□□ 0.17
CHMP2A-201ENST00000312547 C4AP0C0L4 1744 aa16.13■□□□□ 0.17
CHMP2A-201ENST00000312547 IPO8O15397 1037 aaKnown RBP16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 ZPR1O75312 459 aa16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 GYS1P13807 737 aa16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 CLEC4GQ6UXB4 293 aa16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 ARXQ96QS3 562 aa16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 MAP3K2Q9Y2U5 619 aa16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 CACNA1FO60840 1977 aa16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 RNF123Q5XPI4 1314 aa16.12■□□□□ 0.17
CHMP2A-201ENST00000312547 SCN7AQ01118 1682 aa16.11■□□□□ 0.17
CHMP2A-201ENST00000312547 TRIM27P14373 513 aa16.11■□□□□ 0.17
CHMP2A-201ENST00000312547 ZKSCAN2Q63HK3 967 aa16.11■□□□□ 0.17
CHMP2A-201ENST00000312547 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
CHMP2A-201ENST00000312547 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
CHMP2A-201ENST00000312547 DNAAF4Q8WXU2 420 aa16.11■□□□□ 0.17
CHMP2A-201ENST00000312547 FRAT1Q92837 279 aaPredicted RBP16.11■□□□□ 0.17
CHMP2A-201ENST00000312547 METTL22Q9BUU2 404 aaPredicted RBP16.11■□□□□ 0.17
CHMP2A-201ENST00000312547 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
CHMP2A-201ENST00000312547 F6X3S4 739 aa16.1■□□□□ 0.17
CHMP2A-201ENST00000312547 CENPBP07199 599 aaPredicted RBP16.1■□□□□ 0.17
CHMP2A-201ENST00000312547 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
CHMP2A-201ENST00000312547 FKBP8Q14318 412 aa16.1■□□□□ 0.17
CHMP2A-201ENST00000312547 SLC16A10Q8TF71 515 aa16.1■□□□□ 0.17
CHMP2A-201ENST00000312547 ZNF652Q9Y2D9 606 aa16.1■□□□□ 0.17
CHMP2A-201ENST00000312547 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
CHMP2A-201ENST00000312547 MSH5O43196 834 aa16.09■□□□□ 0.17
CHMP2A-201ENST00000312547 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
CHMP2A-201ENST00000312547 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
CHMP2A-201ENST00000312547 ZNF34Q8IZ26 560 aa16.09■□□□□ 0.17
CHMP2A-201ENST00000312547 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
CHMP2A-201ENST00000312547 TNNQ9UQP3 1299 aa16.09■□□□□ 0.17
CHMP2A-201ENST00000312547 ABCC4O15439 1325 aa16.09■□□□□ 0.17
CHMP2A-201ENST00000312547 CASZ1Q86V15 1759 aa16.08■□□□□ 0.17
CHMP2A-201ENST00000312547 PLIN1O60240 522 aa16.08■□□□□ 0.16
CHMP2A-201ENST00000312547 RRP1P56182 461 aaKnown RBP16.08■□□□□ 0.16
CHMP2A-201ENST00000312547 BEND3Q5T5X7 828 aa16.08■□□□□ 0.16
CHMP2A-201ENST00000312547 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
CHMP2A-201ENST00000312547 IGKV5-2P06315 115 aa16.07■□□□□ 0.16
CHMP2A-201ENST00000312547 TM4SF1P30408 202 aa16.07■□□□□ 0.16
CHMP2A-201ENST00000312547 NFIXQ14938 502 aa16.07■□□□□ 0.16
CHMP2A-201ENST00000312547 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
CHMP2A-201ENST00000312547 MYD88Q99836 296 aa16.07■□□□□ 0.16
CHMP2A-201ENST00000312547 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
CHMP2A-201ENST00000312547 PXDNLA1KZ92 1463 aa16.07■□□□□ 0.16
CHMP2A-201ENST00000312547 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
CHMP2A-201ENST00000312547 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.06■□□□□ 0.16
CHMP2A-201ENST00000312547 LINS1Q8NG48 757 aa16.06■□□□□ 0.16
CHMP2A-201ENST00000312547 UTRNP46939 3433 aa16.06■□□□□ 0.16
CHMP2A-201ENST00000312547 ARFGEF2Q9Y6D5 1785 aa16.05■□□□□ 0.16
CHMP2A-201ENST00000312547 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
CHMP2A-201ENST00000312547 RLBP1P12271 317 aa16.05■□□□□ 0.16
CHMP2A-201ENST00000312547 NEXNQ0ZGT2 675 aa16.05■□□□□ 0.16
CHMP2A-201ENST00000312547 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
CHMP2A-201ENST00000312547 INTS3Q68E01 1043 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-201ENST00000312547 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
CHMP2A-201ENST00000312547 DZIP1LQ8IYY4 767 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-201ENST00000312547 MTFR1LQ9H019 292 aa16.05■□□□□ 0.16
CHMP2A-201ENST00000312547 NEURL1BA8MQ27 555 aa16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 ALDH1L1O75891 902 aa16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 GPTP24298 496 aa16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 DDR1Q08345 913 aa16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 CWF19L2Q2TBE0 894 aaKnown RBP16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 MSL1Q68DK7 614 aa16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 SLC4A10Q6U841 1118 aa16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 NIP7Q9Y221 180 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 SUPT16HQ9Y5B9 1047 aaKnown RBP16.04■□□□□ 0.16
CHMP2A-201ENST00000312547 ZBTB7AO95365 584 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 MS4A1P11836 297 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 PARP10Q53GL7 1025 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 BICDL1Q6ZP65 573 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 TMEM57Q8N5G2 664 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 CCDC191Q8NCU4 936 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 PANK1Q8TE04 598 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 SETDB2Q96T68 719 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 SRCIN1Q9C0H9 1055 aa16.03■□□□□ 0.16
CHMP2A-201ENST00000312547 CARMIL3Q8ND23 1372 aa16.02■□□□□ 0.16
CHMP2A-201ENST00000312547 POLRMTO00411 1230 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms