RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 DNM1Q05193 864 aaKnown RBP21.49■■□□□ 1.03
SPSB4-201ENST00000310546 PROSER2Q86WR7 435 aaPredicted RBP21.49■■□□□ 1.03
SPSB4-201ENST00000310546 LRRC7Q96NW7 1537 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 FAM83GA6ND36 823 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
SPSB4-201ENST00000310546 RGPD8O14715 1765 aaPredicted RBP21.48■■□□□ 1.03
SPSB4-201ENST00000310546 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 RTF1Q92541 710 aaKnown RBP21.48■■□□□ 1.03
SPSB4-201ENST00000310546 TRIM5Q9C035 493 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 EXOC6BQ9Y2D4 811 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 F13A1P00488 732 aa21.47■■□□□ 1.03
SPSB4-201ENST00000310546 FAM200AQ8TCP9 573 aa21.47■■□□□ 1.03
SPSB4-201ENST00000310546 CALCOCO1Q9P1Z2 691 aa21.47■■□□□ 1.03
SPSB4-201ENST00000310546 NPHP1O15259 732 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ZSCAN25Q6NSZ9 544 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ATP6V1DQ9Y5K8 247 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 MSH6P52701 1360 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 AATKQ6ZMQ8 1374 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 CHMLP26374 656 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 IL13P35225 146 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 CEP135Q66GS9 1140 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ZNF397Q8NF99 534 aaPredicted RBP21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ZNF215Q9UL58 517 aaPredicted RBP21.46■■□□□ 1.03
SPSB4-201ENST00000310546 NRKQ7Z2Y5 1582 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ZNF853P0CG23 659 aa21.45■■□□□ 1.03
SPSB4-201ENST00000310546 CAPN2P17655 700 aa21.45■■□□□ 1.03
SPSB4-201ENST00000310546 SULT6B1Q6IMI4 303 aa21.45■■□□□ 1.03
SPSB4-201ENST00000310546 USP6P35125 1406 aa21.45■■□□□ 1.02
SPSB4-201ENST00000310546 OSBPL3Q9H4L5 887 aa21.45■■□□□ 1.02
SPSB4-201ENST00000310546 HMMRO75330 724 aa21.45■■□□□ 1.02
SPSB4-201ENST00000310546 SMC3Q9UQE7 1217 aa21.45■■□□□ 1.02
SPSB4-201ENST00000310546 CHD2O14647 1828 aaKnown RBP21.45■■□□□ 1.02
SPSB4-201ENST00000310546 CDK12Q9NYV4 1490 aaPredicted RBP21.44■■□□□ 1.02
SPSB4-201ENST00000310546 CKAP2LQ8IYA6 745 aa21.44■■□□□ 1.02
SPSB4-201ENST00000310546 PSME1Q06323 249 aa21.44■■□□□ 1.02
SPSB4-201ENST00000310546 XRN1Q8IZH2 1706 aaKnown RBP21.44■■□□□ 1.02
SPSB4-201ENST00000310546 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
SPSB4-201ENST00000310546 FBXO38Q6PIJ6 1188 aa21.43■■□□□ 1.02
SPSB4-201ENST00000310546 TRIM34Q9BYJ4 488 aa21.43■■□□□ 1.02
SPSB4-201ENST00000310546 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.43■■□□□ 1.02
SPSB4-201ENST00000310546 AMPHP49418 695 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 ELF2Q15723 593 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 RBM6P78332 1123 aaKnown RBP21.42■■□□□ 1.02
SPSB4-201ENST00000310546 TYRO3Q06418 890 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 EIF4A2Q14240 407 aaKnown RBP21.42■■□□□ 1.02
SPSB4-201ENST00000310546 SLC4A10Q6U841 1118 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 CACTINQ8WUQ7 758 aaKnown RBP21.42■■□□□ 1.02
SPSB4-201ENST00000310546 MAP3K11Q16584 847 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 IL25Q9H293 177 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 PHF8Q9UPP1 1060 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 MRVI1Q9Y6F6 885 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 ANO6Q4KMQ2 910 aa21.41■■□□□ 1.02
SPSB4-201ENST00000310546 UNC5CLQ8IV45 518 aa21.41■■□□□ 1.02
SPSB4-201ENST00000310546 MAP3K19Q56UN5 1328 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 VPS37CA5D8V6 355 aaPredicted RBP21.4■■□□□ 1.02
SPSB4-201ENST00000310546 USHBP1Q8N6Y0 703 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 AK2P54819 239 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 NUP62CLQ9H1M0 184 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 CBX8Q9HC52 389 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 CLIP2Q9UDT6 1046 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 SLC20A2Q08357 652 aa21.39■■□□□ 1.02
SPSB4-201ENST00000310546 USP27XA6NNY8 438 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 OVOS2A0A0J9YW53 1432 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 OVOS2Q6IE36 1432 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 TULP2O00295 520 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 CERS3Q8IU89 383 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 NOL10Q9BSC4 688 aaKnown RBP21.39■■□□□ 1.01
SPSB4-201ENST00000310546 STRCP1A6NGW2 1772 aa21.38■■□□□ 1.01
SPSB4-201ENST00000310546 ZNF75DP51815 510 aa21.38■■□□□ 1.01
SPSB4-201ENST00000310546 TAF7LQ5H9L4 462 aa21.38■■□□□ 1.01
SPSB4-201ENST00000310546 SSH2Q76I76 1423 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 CPA1P15085 419 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 HNRNPH2P55795 449 aaKnown RBP21.37■■□□□ 1.01
SPSB4-201ENST00000310546 PTPN14Q15678 1187 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 CCDC144BQ3MJ40 725 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 CCDC144CPQ8IYA2 1237 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 GTF3C6Q969F1 213 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 LIG1P18858 919 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 GJB2P29033 226 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 HSPA4P34932 840 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 RUFY3Q7L099 469 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 CCDC83Q8IWF9 413 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 LRRCC1Q9C099 1032 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 TRMT1Q9NXH9 659 aaKnown RBP21.37■■□□□ 1.01
SPSB4-201ENST00000310546 LIMCH1Q9UPQ0 1083 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 TNMDQ9H2S6 317 aa21.36■■□□□ 1.01
SPSB4-201ENST00000310546 MIS18AQ9NYP9 233 aa21.36■■□□□ 1.01
SPSB4-201ENST00000310546 NWD1Q149M9 1564 aa21.36■■□□□ 1.01
SPSB4-201ENST00000310546 MAP4K4O95819 1239 aaPredicted RBP21.35■■□□□ 1.01
SPSB4-201ENST00000310546 ARID5BQ14865 1188 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 F6X3S4 739 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 MCM10Q7L590 875 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 MTMR6Q9Y217 621 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 FAM173BQ6P4H8 233 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 FERMT3Q86UX7 667 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 PLA2G4DQ86XP0 818 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 ZNF446Q9NWS9 450 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 LARGE1O95461 756 aa21.34■■□□□ 1.01
SPSB4-201ENST00000310546 DACT1Q9NYF0 836 aa21.34■■□□□ 1.01
SPSB4-201ENST00000310546 RAD50Q92878 1312 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms