RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 DNM1Q05193 864 aaKnown RBP21.49■■□□□ 1.03
SPSB4-201ENST00000310546 PROSER2Q86WR7 435 aaPredicted RBP21.49■■□□□ 1.03
SPSB4-201ENST00000310546 LRRC7Q96NW7 1537 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 FAM83GA6ND36 823 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
SPSB4-201ENST00000310546 RGPD8O14715 1765 aaPredicted RBP21.48■■□□□ 1.03
SPSB4-201ENST00000310546 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 RTF1Q92541 710 aaKnown RBP21.48■■□□□ 1.03
SPSB4-201ENST00000310546 TRIM5Q9C035 493 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 EXOC6BQ9Y2D4 811 aa21.48■■□□□ 1.03
SPSB4-201ENST00000310546 F13A1P00488 732 aa21.47■■□□□ 1.03
SPSB4-201ENST00000310546 FAM200AQ8TCP9 573 aa21.47■■□□□ 1.03
SPSB4-201ENST00000310546 CALCOCO1Q9P1Z2 691 aa21.47■■□□□ 1.03
SPSB4-201ENST00000310546 NPHP1O15259 732 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ZSCAN25Q6NSZ9 544 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ATP6V1DQ9Y5K8 247 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 MSH6P52701 1360 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 AATKQ6ZMQ8 1374 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 CHMLP26374 656 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 IL13P35225 146 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 CEP135Q66GS9 1140 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ZNF397Q8NF99 534 aaPredicted RBP21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ZNF215Q9UL58 517 aaPredicted RBP21.46■■□□□ 1.03
SPSB4-201ENST00000310546 NRKQ7Z2Y5 1582 aa21.46■■□□□ 1.03
SPSB4-201ENST00000310546 ZNF853P0CG23 659 aa21.45■■□□□ 1.03
SPSB4-201ENST00000310546 CAPN2P17655 700 aa21.45■■□□□ 1.03
SPSB4-201ENST00000310546 SULT6B1Q6IMI4 303 aa21.45■■□□□ 1.03
SPSB4-201ENST00000310546 USP6P35125 1406 aa21.45■■□□□ 1.02
SPSB4-201ENST00000310546 OSBPL3Q9H4L5 887 aa21.45■■□□□ 1.02
SPSB4-201ENST00000310546 HMMRO75330 724 aa21.45■■□□□ 1.02
SPSB4-201ENST00000310546 SMC3Q9UQE7 1217 aa21.45■■□□□ 1.02
SPSB4-201ENST00000310546 CHD2O14647 1828 aaKnown RBP21.45■■□□□ 1.02
SPSB4-201ENST00000310546 CDK12Q9NYV4 1490 aaPredicted RBP21.44■■□□□ 1.02
SPSB4-201ENST00000310546 CKAP2LQ8IYA6 745 aa21.44■■□□□ 1.02
SPSB4-201ENST00000310546 PSME1Q06323 249 aa21.44■■□□□ 1.02
SPSB4-201ENST00000310546 XRN1Q8IZH2 1706 aaKnown RBP21.44■■□□□ 1.02
SPSB4-201ENST00000310546 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
SPSB4-201ENST00000310546 FBXO38Q6PIJ6 1188 aa21.43■■□□□ 1.02
SPSB4-201ENST00000310546 TRIM34Q9BYJ4 488 aa21.43■■□□□ 1.02
SPSB4-201ENST00000310546 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.43■■□□□ 1.02
SPSB4-201ENST00000310546 AMPHP49418 695 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 ELF2Q15723 593 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 RBM6P78332 1123 aaKnown RBP21.42■■□□□ 1.02
SPSB4-201ENST00000310546 TYRO3Q06418 890 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 EIF4A2Q14240 407 aaKnown RBP21.42■■□□□ 1.02
SPSB4-201ENST00000310546 SLC4A10Q6U841 1118 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 CACTINQ8WUQ7 758 aaKnown RBP21.42■■□□□ 1.02
SPSB4-201ENST00000310546 MAP3K11Q16584 847 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 IL25Q9H293 177 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 PHF8Q9UPP1 1060 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 MRVI1Q9Y6F6 885 aa21.42■■□□□ 1.02
SPSB4-201ENST00000310546 ANO6Q4KMQ2 910 aa21.41■■□□□ 1.02
SPSB4-201ENST00000310546 UNC5CLQ8IV45 518 aa21.41■■□□□ 1.02
SPSB4-201ENST00000310546 MAP3K19Q56UN5 1328 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 VPS37CA5D8V6 355 aaPredicted RBP21.4■■□□□ 1.02
SPSB4-201ENST00000310546 USHBP1Q8N6Y0 703 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 AK2P54819 239 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 NUP62CLQ9H1M0 184 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 CBX8Q9HC52 389 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 CLIP2Q9UDT6 1046 aa21.4■■□□□ 1.02
SPSB4-201ENST00000310546 SLC20A2Q08357 652 aa21.39■■□□□ 1.02
SPSB4-201ENST00000310546 USP27XA6NNY8 438 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 OVOS2A0A0J9YW53 1432 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 OVOS2Q6IE36 1432 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 TULP2O00295 520 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 CERS3Q8IU89 383 aa21.39■■□□□ 1.01
SPSB4-201ENST00000310546 NOL10Q9BSC4 688 aaKnown RBP21.39■■□□□ 1.01
SPSB4-201ENST00000310546 STRCP1A6NGW2 1772 aa21.38■■□□□ 1.01
SPSB4-201ENST00000310546 ZNF75DP51815 510 aa21.38■■□□□ 1.01
SPSB4-201ENST00000310546 TAF7LQ5H9L4 462 aa21.38■■□□□ 1.01
SPSB4-201ENST00000310546 SSH2Q76I76 1423 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 CPA1P15085 419 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 HNRNPH2P55795 449 aaKnown RBP21.37■■□□□ 1.01
SPSB4-201ENST00000310546 PTPN14Q15678 1187 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 CCDC144BQ3MJ40 725 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 CCDC144CPQ8IYA2 1237 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 GTF3C6Q969F1 213 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 LIG1P18858 919 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 GJB2P29033 226 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 HSPA4P34932 840 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 RUFY3Q7L099 469 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 CCDC83Q8IWF9 413 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 LRRCC1Q9C099 1032 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 TRMT1Q9NXH9 659 aaKnown RBP21.37■■□□□ 1.01
SPSB4-201ENST00000310546 LIMCH1Q9UPQ0 1083 aa21.37■■□□□ 1.01
SPSB4-201ENST00000310546 TNMDQ9H2S6 317 aa21.36■■□□□ 1.01
SPSB4-201ENST00000310546 MIS18AQ9NYP9 233 aa21.36■■□□□ 1.01
SPSB4-201ENST00000310546 NWD1Q149M9 1564 aa21.36■■□□□ 1.01
SPSB4-201ENST00000310546 MAP4K4O95819 1239 aaPredicted RBP21.35■■□□□ 1.01
SPSB4-201ENST00000310546 ARID5BQ14865 1188 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 F6X3S4 739 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 MCM10Q7L590 875 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 MTMR6Q9Y217 621 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 FAM173BQ6P4H8 233 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 FERMT3Q86UX7 667 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 PLA2G4DQ86XP0 818 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 ZNF446Q9NWS9 450 aa21.35■■□□□ 1.01
SPSB4-201ENST00000310546 LARGE1O95461 756 aa21.34■■□□□ 1.01
SPSB4-201ENST00000310546 DACT1Q9NYF0 836 aa21.34■■□□□ 1.01
SPSB4-201ENST00000310546 RAD50Q92878 1312 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms