RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 LOC102724428A0A0B4J2F2 783 aa13.77□□□□□ -0.2
TRIM59-201ENST00000309784 SIK1P57059 783 aa13.77□□□□□ -0.2
TRIM59-201ENST00000309784 SMARCC1Q92922 1105 aaPredicted RBP13.77□□□□□ -0.2
TRIM59-201ENST00000309784 DCTPP1Q9H773 170 aa13.77□□□□□ -0.2
TRIM59-201ENST00000309784 PLCH1Q4KWH8 1693 aa13.77□□□□□ -0.21
TRIM59-201ENST00000309784 BACH2Q9BYV9 841 aa13.77□□□□□ -0.21
TRIM59-201ENST00000309784 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
TRIM59-201ENST00000309784 ERICH6Q7L0X2 663 aa13.76□□□□□ -0.21
TRIM59-201ENST00000309784 LRRCC1Q9C099 1032 aa13.76□□□□□ -0.21
TRIM59-201ENST00000309784 ERBB4Q15303 1308 aa13.76□□□□□ -0.21
TRIM59-201ENST00000309784 VIRMAQ69YN4 1812 aaKnown RBP13.76□□□□□ -0.21
TRIM59-201ENST00000309784 BCL9LQ86UU0 1499 aa13.76□□□□□ -0.21
TRIM59-201ENST00000309784 C16orf71Q8IYS4 520 aaPredicted RBP13.76□□□□□ -0.21
TRIM59-201ENST00000309784 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
TRIM59-201ENST00000309784 DAXXQ9UER7 740 aaPredicted RBP13.76□□□□□ -0.21
TRIM59-201ENST00000309784 GCKRQ14397 625 aa13.76□□□□□ -0.21
TRIM59-201ENST00000309784 CWC25Q9NXE8 425 aaPredicted RBP13.76□□□□□ -0.21
TRIM59-201ENST00000309784 IGKV5-2P06315 115 aa13.75□□□□□ -0.21
TRIM59-201ENST00000309784 VSIG10Q8N0Z9 540 aa13.75□□□□□ -0.21
TRIM59-201ENST00000309784 LRP6O75581 1613 aa13.75□□□□□ -0.21
TRIM59-201ENST00000309784 BCL9O00512 1426 aa13.75□□□□□ -0.21
TRIM59-201ENST00000309784 NPHP1O15259 732 aa13.75□□□□□ -0.21
TRIM59-201ENST00000309784 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
TRIM59-201ENST00000309784 SUCLG2Q96I99 432 aa13.75□□□□□ -0.21
TRIM59-201ENST00000309784 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
TRIM59-201ENST00000309784 G3BP1Q13283 466 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRIM59-201ENST00000309784 BICC1Q9H694 974 aaKnown RBP13.75□□□□□ -0.21
TRIM59-201ENST00000309784 PA2G4Q9UQ80 394 aaKnown RBP13.74□□□□□ -0.21
TRIM59-201ENST00000309784 MRC1P22897 1456 aa13.74□□□□□ -0.21
TRIM59-201ENST00000309784 MFAP1P55081 439 aaKnown RBP13.73□□□□□ -0.21
TRIM59-201ENST00000309784 TAF7LQ5H9L4 462 aa13.73□□□□□ -0.21
TRIM59-201ENST00000309784 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
TRIM59-201ENST00000309784 CYP19A1P11511 503 aaPredicted RBP13.73□□□□□ -0.21
TRIM59-201ENST00000309784 CCDC87Q9NVE4 849 aa13.73□□□□□ -0.21
TRIM59-201ENST00000309784 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
TRIM59-201ENST00000309784 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
TRIM59-201ENST00000309784 HSP90AB4PQ58FF6 505 aa13.73□□□□□ -0.21
TRIM59-201ENST00000309784 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
TRIM59-201ENST00000309784 SLC4A9Q96Q91 983 aa13.72□□□□□ -0.21
TRIM59-201ENST00000309784 OTUD7AQ8TE49 926 aaPredicted RBP13.72□□□□□ -0.21
TRIM59-201ENST00000309784 ATP10DQ9P241 1426 aa13.72□□□□□ -0.21
TRIM59-201ENST00000309784 GTF2E1P29083 439 aaPredicted RBP13.72□□□□□ -0.21
TRIM59-201ENST00000309784 BICDL1Q6ZP65 573 aa13.72□□□□□ -0.21
TRIM59-201ENST00000309784 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
TRIM59-201ENST00000309784 PTF1AQ7RTS3 328 aa13.71□□□□□ -0.21
TRIM59-201ENST00000309784 KLHDC4Q8TBB5 520 aa13.71□□□□□ -0.21
TRIM59-201ENST00000309784 CCNL1Q9UK58 526 aaPredicted RBP13.71□□□□□ -0.21
TRIM59-201ENST00000309784 RILPL2Q969X0 211 aa13.71□□□□□ -0.22
TRIM59-201ENST00000309784 FAM89AQ96GI7 184 aa13.71□□□□□ -0.22
TRIM59-201ENST00000309784 TRMT112Q9UI30 125 aaKnown RBP13.71□□□□□ -0.22
TRIM59-201ENST00000309784 PXDNLA1KZ92 1463 aa13.71□□□□□ -0.22
TRIM59-201ENST00000309784 LMBR1LQ6UX01 489 aa13.7□□□□□ -0.22
TRIM59-201ENST00000309784 CLASRPQ8N2M8 674 aaKnown RBP13.7□□□□□ -0.22
TRIM59-201ENST00000309784 PHF14O94880 888 aa13.7□□□□□ -0.22
TRIM59-201ENST00000309784 IFIT2P09913 472 aaKnown RBP13.7□□□□□ -0.22
TRIM59-201ENST00000309784 HSP90AB3PQ58FF7 597 aa13.7□□□□□ -0.22
TRIM59-201ENST00000309784 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 C8orf34Q49A92 452 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 SSH3Q8TE77 659 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 KIF1BPQ96EK5 621 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 ITPK1Q13572 414 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 HLFQ16534 295 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 CCDC191Q8NCU4 936 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 RHPN1Q8TCX5 695 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 CASC1Q6TDU7 716 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 MAP3K15Q6ZN16 1313 aa13.69□□□□□ -0.22
TRIM59-201ENST00000309784 SIPA1L3O60292 1781 aaPredicted RBP13.69□□□□□ -0.22
TRIM59-201ENST00000309784 IL6STP40189 918 aaPredicted RBP13.68□□□□□ -0.22
TRIM59-201ENST00000309784 GNPATO15228 680 aa13.68□□□□□ -0.22
TRIM59-201ENST00000309784 TRIM37O94972 964 aa13.68□□□□□ -0.22
TRIM59-201ENST00000309784 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
TRIM59-201ENST00000309784 SMIM5Q71RC9 77 aa13.68□□□□□ -0.22
TRIM59-201ENST00000309784 C5P01031 1676 aa13.68□□□□□ -0.22
TRIM59-201ENST00000309784 LRP10Q7Z4F1 713 aa13.68□□□□□ -0.22
TRIM59-201ENST00000309784 ADAMTS7Q9UKP4 1686 aa13.68□□□□□ -0.22
TRIM59-201ENST00000309784 RAB11FIP3O75154 756 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 PLEKHM2Q8IWE5 1019 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 KCPQ6ZWJ8 1503 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 MSH5O43196 834 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 MX1P20591 662 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 CCDC57Q2TAC2 916 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 EPHA10Q5JZY3 1008 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
TRIM59-201ENST00000309784 MAP4K4O95819 1239 aaPredicted RBP13.67□□□□□ -0.22
TRIM59-201ENST00000309784 AACSQ86V21 672 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 ERC1Q8IUD2 1116 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
TRIM59-201ENST00000309784 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRIM59-201ENST00000309784 GPATCH3Q96I76 525 aa13.66□□□□□ -0.22
TRIM59-201ENST00000309784 AK7Q96M32 723 aa13.66□□□□□ -0.22
TRIM59-201ENST00000309784 ZNF652Q9Y2D9 606 aa13.66□□□□□ -0.22
TRIM59-201ENST00000309784 NRAPQ86VF7 1730 aa13.66□□□□□ -0.22
TRIM59-201ENST00000309784 ZPR1O75312 459 aa13.65□□□□□ -0.22
TRIM59-201ENST00000309784 NEUROD6Q96NK8 337 aa13.65□□□□□ -0.22
TRIM59-201ENST00000309784 CCDC8Q9H0W5 538 aaPredicted RBP13.65□□□□□ -0.22
TRIM59-201ENST00000309784 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.22
TRIM59-201ENST00000309784 TOGARAM1Q9Y4F4 1720 aa13.65□□□□□ -0.22
TRIM59-201ENST00000309784 PDE1AP54750 535 aa13.65□□□□□ -0.23
TRIM59-201ENST00000309784 RBM6P78332 1123 aaKnown RBP13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms