RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 ACEP12821 1306 aa17.16■□□□□ 0.34
SCUBE2-201ENST00000309263 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
SCUBE2-201ENST00000309263 EDC4Q6P2E9 1401 aaKnown RBP17.15■□□□□ 0.34
SCUBE2-201ENST00000309263 NBPF7P0C2Y1 421 aaPredicted RBP17.15■□□□□ 0.34
SCUBE2-201ENST00000309263 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.15■□□□□ 0.34
SCUBE2-201ENST00000309263 V9GYY5 206 aaPredicted RBP17.15■□□□□ 0.34
SCUBE2-201ENST00000309263 METP08581 1390 aa17.15■□□□□ 0.34
SCUBE2-201ENST00000309263 HSPA2P54652 639 aa17.14■□□□□ 0.34
SCUBE2-201ENST00000309263 NAA30Q147X3 362 aaPredicted RBP17.14■□□□□ 0.34
SCUBE2-201ENST00000309263 NUP62CLQ9H1M0 184 aa17.14■□□□□ 0.34
SCUBE2-201ENST00000309263 TNMDQ9H2S6 317 aa17.14■□□□□ 0.34
SCUBE2-201ENST00000309263 NRBP1Q9UHY1 535 aa17.14■□□□□ 0.34
SCUBE2-201ENST00000309263 CYP46A1Q9Y6A2 500 aa17.14■□□□□ 0.34
SCUBE2-201ENST00000309263 SGSM2O43147 1006 aa17.14■□□□□ 0.33
SCUBE2-201ENST00000309263 TAF7Q15545 349 aaPredicted RBP17.14■□□□□ 0.33
SCUBE2-201ENST00000309263 PTH1RQ03431 593 aa17.14■□□□□ 0.33
SCUBE2-201ENST00000309263 KCNF1Q9H3M0 494 aa17.14■□□□□ 0.33
SCUBE2-201ENST00000309263 TTC21BQ7Z4L5 1316 aa17.14■□□□□ 0.33
SCUBE2-201ENST00000309263 ARHGAP23Q9P227 1491 aa17.14■□□□□ 0.33
SCUBE2-201ENST00000309263 SLIT1O75093 1534 aa17.14■□□□□ 0.33
SCUBE2-201ENST00000309263 RPAP1Q9BWH6 1393 aaPredicted RBP17.14■□□□□ 0.33
SCUBE2-201ENST00000309263 ZKSCAN1P17029 563 aaPredicted RBP17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 DACT1Q9NYF0 836 aa17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 MAP3K11Q16584 847 aa17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 IFIT2P09913 472 aaKnown RBP17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 ZSCAN20P17040 1043 aaPredicted RBP17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 LIG1P18858 919 aa17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 FGD1P98174 961 aa17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 TPD52L1Q16890 204 aaPredicted RBP17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 RAD50Q92878 1312 aa17.13■□□□□ 0.33
SCUBE2-201ENST00000309263 ANO6Q4KMQ2 910 aa17.12■□□□□ 0.33
SCUBE2-201ENST00000309263 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
SCUBE2-201ENST00000309263 RAB11FIP3O75154 756 aa17.12■□□□□ 0.33
SCUBE2-201ENST00000309263 KRT85P78386 507 aa17.12■□□□□ 0.33
SCUBE2-201ENST00000309263 SIL1Q9H173 461 aa17.12■□□□□ 0.33
SCUBE2-201ENST00000309263 TBX22Q9Y458 520 aa17.12■□□□□ 0.33
SCUBE2-201ENST00000309263 KIAA1524Q8TCG1 905 aa17.12■□□□□ 0.33
SCUBE2-201ENST00000309263 EYA1Q99502 592 aa17.12■□□□□ 0.33
SCUBE2-201ENST00000309263 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 CLASRPQ8N2M8 674 aaKnown RBP17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 KIF1BPQ96EK5 621 aa17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 C9orf78Q9NZ63 289 aaPredicted RBP17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 MTMR6Q9Y217 621 aa17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 PRR36Q9H6K5 1346 aa17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 KIAA0232Q92628 1395 aa17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
SCUBE2-201ENST00000309263 TNNT1P13805 278 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 NLRP6P59044 892 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 TYRO3Q06418 890 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 DMTNQ08495 405 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 SPATA32Q96LK8 384 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 ME3Q16798 604 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 TTC6Q86TZ1 520 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 A0A087WWV3 80 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 FILIP1Q7Z7B0 1213 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 DNAJC25Q9H1X3 360 aa17.1■□□□□ 0.33
SCUBE2-201ENST00000309263 RUFY2Q8WXA3 655 aa17.09■□□□□ 0.33
SCUBE2-201ENST00000309263 CCDC8Q9H0W5 538 aaPredicted RBP17.09■□□□□ 0.33
SCUBE2-201ENST00000309263 AMOTL2Q9Y2J4 779 aa17.09■□□□□ 0.33
SCUBE2-201ENST00000309263 GNAT3A8MTJ3 354 aa17.09■□□□□ 0.33
SCUBE2-201ENST00000309263 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
SCUBE2-201ENST00000309263 CPS1P31327 1500 aa17.09■□□□□ 0.33
SCUBE2-201ENST00000309263 AACSQ86V21 672 aa17.09■□□□□ 0.33
SCUBE2-201ENST00000309263 FAM200AQ8TCP9 573 aa17.09■□□□□ 0.33
SCUBE2-201ENST00000309263 HYPKQ9NX55 129 aa17.09■□□□□ 0.33
SCUBE2-201ENST00000309263 SALL3Q9BXA9 1300 aa17.08■□□□□ 0.33
SCUBE2-201ENST00000309263 STAP2Q9UGK3 403 aa17.08■□□□□ 0.33
SCUBE2-201ENST00000309263 AIMP1Q12904 312 aaKnown RBP17.08■□□□□ 0.32
SCUBE2-201ENST00000309263 CPSF1Q10570 1443 aaKnown RBP17.08■□□□□ 0.32
SCUBE2-201ENST00000309263 COL9A3Q14050 684 aaPredicted RBP17.08■□□□□ 0.32
SCUBE2-201ENST00000309263 PI4K2BQ8TCG2 481 aa17.08■□□□□ 0.32
SCUBE2-201ENST00000309263 FAM227BQ96M60 508 aa17.08■□□□□ 0.32
SCUBE2-201ENST00000309263 BOLA2Q9H3K6 86 aa17.07■□□□□ 0.32
SCUBE2-201ENST00000309263 GOLGA6L19H0YKK7 550 aa17.07■□□□□ 0.32
SCUBE2-201ENST00000309263 H3BQV1 296 aa17.07■□□□□ 0.32
SCUBE2-201ENST00000309263 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
SCUBE2-201ENST00000309263 CCDC112Q8NEF3 446 aa17.07■□□□□ 0.32
SCUBE2-201ENST00000309263 TTC14Q96N46 770 aa17.07■□□□□ 0.32
SCUBE2-201ENST00000309263 CHPF2Q9P2E5 772 aa17.07■□□□□ 0.32
SCUBE2-201ENST00000309263 AATKQ6ZMQ8 1374 aa17.07■□□□□ 0.32
SCUBE2-201ENST00000309263 ZNF165P49910 485 aa17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 RBM8AQ9Y5S9 174 aaKnown RBP17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 FSD1Q9BTV5 496 aa17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 CBX8Q9HC52 389 aa17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 TPCN1Q9ULQ1 816 aa17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 ZNF330Q9Y3S2 320 aaPredicted RBP17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 ATP7BP35670 1465 aa17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 SYTL4Q96C24 671 aaPredicted RBP17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 LRRC2Q9BYS8 371 aa17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 CGNQ9P2M7 1197 aaKnown RBP17.06■□□□□ 0.32
SCUBE2-201ENST00000309263 ZNF142P52746 1687 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms