RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 GIGYF1O75420 1035 aaPredicted RBP6.14□□□□□ -1.43
CAST-201ENST00000309190 PDIA4P13667 645 aaKnown RBP6.14□□□□□ -1.43
CAST-201ENST00000309190 ITPK1Q13572 414 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 DHX37Q8IY37 1157 aaKnown RBP6.14□□□□□ -1.43
CAST-201ENST00000309190 MTMR7Q9Y216 660 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 DLC1Q96QB1 1528 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 OTUD7AQ8TE49 926 aaPredicted RBP6.14□□□□□ -1.43
CAST-201ENST00000309190 PTCH1Q13635 1447 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 PEAK1Q9H792 1746 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 SPATA31A1Q5TZJ5 1347 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 PCDH11XQ9BZA7 1347 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 PCDH11YQ9BZA8 1340 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 TAF5LO75529 589 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 CRKLP46109 303 aaKnown RBP6.14□□□□□ -1.43
CAST-201ENST00000309190 SLC4A9Q96Q91 983 aa6.14□□□□□ -1.43
CAST-201ENST00000309190 CHL1O00533 1208 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 ANO8Q9HCE9 1232 aaPredicted RBP6.13□□□□□ -1.43
CAST-201ENST00000309190 SPDYE4A6NLX3 237 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 NBPF26B4DH59 902 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 NBPF14Q5TI25 921 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 NBPF10Q6P3W6 841 aaKnown RBP6.13□□□□□ -1.43
CAST-201ENST00000309190 KIF6Q6ZMV9 814 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 CENPQQ7L2Z9 268 aaPredicted RBP6.13□□□□□ -1.43
CAST-201ENST00000309190 NBPF15Q8N660 670 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 SRCIN1Q9C0H9 1055 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 NAP1L2Q9ULW6 460 aaPredicted RBP6.13□□□□□ -1.43
CAST-201ENST00000309190 F8W031 263 aaPredicted RBP6.13□□□□□ -1.43
CAST-201ENST00000309190 RIMBP2O15034 1052 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 RAD21O60216 631 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 LRRC4BQ9NT99 713 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 RBM6P78332 1123 aaKnown RBP6.13□□□□□ -1.43
CAST-201ENST00000309190 LMBR1LQ6UX01 489 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 WDR63Q8IWG1 891 aa6.13□□□□□ -1.43
CAST-201ENST00000309190 MEGF6O75095 1541 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 G3V3G9 751 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 SEC24BO95487 1268 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 DCAF8Q5TAQ9 597 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 NBPF5PQ86XG9 351 aaPredicted RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 DNAAF4Q8WXU2 420 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 EDC3Q96F86 508 aaKnown RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 LARP6Q9BRS8 491 aaKnown RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 DBF4Q9UBU7 674 aaPredicted RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 RBM25P49756 843 aaKnown RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 NFKBIBQ15653 356 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 DNAJC2Q99543 621 aaKnown RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 RTCBQ9Y3I0 505 aaKnown RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 CHAF1AQ13111 956 aaPredicted RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 TXNRD1Q16881 649 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 CCDC27Q2M243 656 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 SLFNL1Q499Z3 407 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 KCTD17Q8N5Z5 321 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 PUS7Q96PZ0 661 aaKnown RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 ISY1Q9ULR0 285 aaKnown RBP6.12□□□□□ -1.43
CAST-201ENST00000309190 PXDNQ92626 1479 aa6.12□□□□□ -1.43
CAST-201ENST00000309190 PNMA6EA0A0J9YXQ4 647 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 TIMM10P62072 90 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 SEC31BQ9NQW1 1179 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 CNNM1Q9NRU3 951 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 CAMTA1Q9Y6Y1 1673 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 SPATA31A5Q5VU36 1347 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 SPATA31A7Q8IWB4 1347 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 MFAP1P55081 439 aaKnown RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 FOXD4L6Q3SYB3 417 aaPredicted RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 FOXD4L5Q5VV16 416 aaPredicted RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 ZNF772Q68DY9 489 aaPredicted RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 FOXD4L3Q6VB84 417 aaPredicted RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 FOXD4L4Q8WXT5 416 aaPredicted RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 OVOS2A0A0J9YW53 1432 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 OVOS2Q6IE36 1432 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 DDX58O95786 925 aaKnown RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 CHGBP05060 677 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 HSP90AB1P08238 724 aaKnown RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 FKBP4Q02790 459 aaKnown RBP eCLIP6.11□□□□□ -1.43
CAST-201ENST00000309190 MRPL50Q8N5N7 158 aaKnown RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 NSD2O96028 1365 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 DDX60Q8IY21 1712 aaKnown RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 PPP1R42Q7Z4L9 355 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 ABCF2Q9UG63 623 aa6.11□□□□□ -1.43
CAST-201ENST00000309190 NSFL1CQ9UNZ2 370 aaKnown RBP6.11□□□□□ -1.43
CAST-201ENST00000309190 BRCA2P51587 3418 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 TRAPPC3LQ5T215 181 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 LINC00116Q8NCU8 138 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 PUS3Q9BZE2 481 aaKnown RBP6.1□□□□□ -1.43
CAST-201ENST00000309190 CHRNA5P30532 468 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 KCNJ4P48050 445 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 GRM1Q13255 1194 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 RBM26Q5T8P6 1007 aaKnown RBP6.1□□□□□ -1.43
CAST-201ENST00000309190 CIZ1Q9ULV3 898 aaPredicted RBP6.1□□□□□ -1.43
CAST-201ENST00000309190 C6orf229H3BNL8 230 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 EPHA10Q5JZY3 1008 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 VPS37DQ86XT2 251 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 ARHGEF1Q92888 912 aaKnown RBP6.1□□□□□ -1.43
CAST-201ENST00000309190 BOLA2Q9H3K6 86 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 AATKQ6ZMQ8 1374 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 PALLDQ8WX93 1383 aa6.1□□□□□ -1.43
CAST-201ENST00000309190 SSH2Q76I76 1423 aa6.09□□□□□ -1.43
CAST-201ENST00000309190 VPS72Q15906 364 aa6.09□□□□□ -1.43
CAST-201ENST00000309190 SETDB2Q96T68 719 aa6.09□□□□□ -1.43
CAST-201ENST00000309190 BICC1Q9H694 974 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms