RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 IL17RAQ96F46 866 aa20.21■□□□□ 0.83
TVP23B-201ENST00000307767 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
TVP23B-201ENST00000307767 SASH1O94885 1247 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 RAB3GAP1Q15042 981 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 ANKRD13DQ6ZTN6 518 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 PALD1Q9ULE6 856 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 PCDH11XQ9BZA7 1347 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 PCDH11YQ9BZA8 1340 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 NBPF26B4DH59 902 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 MAP4K4O95819 1239 aaPredicted RBP20.2■□□□□ 0.82
TVP23B-201ENST00000307767 NBPF14Q5TI25 921 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 NBPF10Q6P3W6 841 aaKnown RBP20.2■□□□□ 0.82
TVP23B-201ENST00000307767 NBPF15Q8N660 670 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 MYD88Q99836 296 aa20.2■□□□□ 0.82
TVP23B-201ENST00000307767 TNPO1Q92973 898 aaKnown RBP20.19■□□□□ 0.82
TVP23B-201ENST00000307767 SHANK3Q9BYB0 1731 aa20.19■□□□□ 0.82
TVP23B-201ENST00000307767 NHSL1Q5SYE7 1610 aa20.19■□□□□ 0.82
TVP23B-201ENST00000307767 KCPQ6ZWJ8 1503 aa20.17■□□□□ 0.82
TVP23B-201ENST00000307767 ERVV-2B6SEH9 535 aa20.17■□□□□ 0.82
TVP23B-201ENST00000307767 IL2RBP14784 551 aa20.17■□□□□ 0.82
TVP23B-201ENST00000307767 HDAC5Q9UQL6 1122 aa20.17■□□□□ 0.82
TVP23B-201ENST00000307767 TTC41PQ6P2S7 1318 aa20.17■□□□□ 0.82
TVP23B-201ENST00000307767 CASP7P55210 303 aa20.15■□□□□ 0.82
TVP23B-201ENST00000307767 UBR2Q8IWV8 1755 aa20.15■□□□□ 0.82
TVP23B-201ENST00000307767 RFX5P48382 616 aaPredicted RBP20.15■□□□□ 0.82
TVP23B-201ENST00000307767 NEXNQ0ZGT2 675 aa20.15■□□□□ 0.82
TVP23B-201ENST00000307767 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
TVP23B-201ENST00000307767 JARID2Q92833 1246 aaPredicted RBP20.15■□□□□ 0.82
TVP23B-201ENST00000307767 EAF2Q96CJ1 260 aaPredicted RBP20.15■□□□□ 0.82
TVP23B-201ENST00000307767 LAMB4A4D0S4 1761 aa20.14■□□□□ 0.82
TVP23B-201ENST00000307767 TNS2Q63HR2 1409 aa20.14■□□□□ 0.82
TVP23B-201ENST00000307767 PAPPAQ13219 1627 aa20.14■□□□□ 0.82
TVP23B-201ENST00000307767 SGSM2O43147 1006 aa20.14■□□□□ 0.81
TVP23B-201ENST00000307767 OS9Q13438 667 aaPredicted RBP20.14■□□□□ 0.81
TVP23B-201ENST00000307767 KLHDC4Q8TBB5 520 aa20.14■□□□□ 0.81
TVP23B-201ENST00000307767 ANO2Q9NQ90 1003 aa20.14■□□□□ 0.81
TVP23B-201ENST00000307767 STRN4Q9NRL3 753 aa20.14■□□□□ 0.81
TVP23B-201ENST00000307767 ERC1Q8IUD2 1116 aa20.14■□□□□ 0.81
TVP23B-201ENST00000307767 COL15A1P39059 1388 aa20.14■□□□□ 0.81
TVP23B-201ENST00000307767 GLRX3O76003 335 aaKnown RBP20.13■□□□□ 0.81
TVP23B-201ENST00000307767 PLBD2Q8NHP8 589 aa20.13■□□□□ 0.81
TVP23B-201ENST00000307767 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
TVP23B-201ENST00000307767 EPB41L2O43491 1005 aaKnown RBP20.12■□□□□ 0.81
TVP23B-201ENST00000307767 ANAPC15P60006 121 aa20.12■□□□□ 0.81
TVP23B-201ENST00000307767 RABL6Q3YEC7 729 aaPredicted RBP20.12■□□□□ 0.81
TVP23B-201ENST00000307767 DDX54Q8TDD1 881 aaKnown RBP20.12■□□□□ 0.81
TVP23B-201ENST00000307767 ERBB4Q15303 1308 aa20.12■□□□□ 0.81
TVP23B-201ENST00000307767 ARFGEF2Q9Y6D5 1785 aa20.12■□□□□ 0.81
TVP23B-201ENST00000307767 ATP5J2-PTCD1G3V325 749 aa20.12■□□□□ 0.81
TVP23B-201ENST00000307767 PTCD1O75127 700 aaKnown RBP20.12■□□□□ 0.81
TVP23B-201ENST00000307767 CYP2E1P05181 493 aaPredicted RBP20.12■□□□□ 0.81
TVP23B-201ENST00000307767 SSFA2P28290 1259 aa20.12■□□□□ 0.81
TVP23B-201ENST00000307767 TTLL7Q6ZT98 887 aa20.12■□□□□ 0.81
TVP23B-201ENST00000307767 LSG1Q9H089 658 aaKnown RBP20.12■□□□□ 0.81
TVP23B-201ENST00000307767 TLR7Q9NYK1 1049 aaKnown RBP20.12■□□□□ 0.81
TVP23B-201ENST00000307767 ST18O60284 1047 aa20.11■□□□□ 0.81
TVP23B-201ENST00000307767 HSP90AA1P07900 732 aaKnown RBP20.11■□□□□ 0.81
TVP23B-201ENST00000307767 HSPA4P34932 840 aa20.11■□□□□ 0.81
TVP23B-201ENST00000307767 CLEC17AQ6ZS10 378 aa20.11■□□□□ 0.81
TVP23B-201ENST00000307767 CNTROBQ8N137 903 aa20.11■□□□□ 0.81
TVP23B-201ENST00000307767 A1BGP04217 495 aa20.11■□□□□ 0.81
TVP23B-201ENST00000307767 AACSQ86V21 672 aa20.11■□□□□ 0.81
TVP23B-201ENST00000307767 ZGPATQ8N5A5 531 aaKnown RBP20.11■□□□□ 0.81
TVP23B-201ENST00000307767 TOGARAM1Q9Y4F4 1720 aa20.1■□□□□ 0.81
TVP23B-201ENST00000307767 NEK4P51957 841 aa20.1■□□□□ 0.81
TVP23B-201ENST00000307767 COPRSQ9NQ92 184 aa20.1■□□□□ 0.81
TVP23B-201ENST00000307767 TRAK2O60296 914 aa20.09■□□□□ 0.81
TVP23B-201ENST00000307767 PTPN12Q05209 780 aaKnown RBP20.09■□□□□ 0.81
TVP23B-201ENST00000307767 G3BP1Q13283 466 aaKnown RBP eCLIP20.09■□□□□ 0.81
TVP23B-201ENST00000307767 SIL1Q9H173 461 aa20.09■□□□□ 0.81
TVP23B-201ENST00000307767 PKP1Q13835 747 aa20.09■□□□□ 0.81
TVP23B-201ENST00000307767 UBE3BQ7Z3V4 1068 aa20.09■□□□□ 0.81
TVP23B-201ENST00000307767 CCDC8Q9H0W5 538 aaPredicted RBP20.09■□□□□ 0.81
TVP23B-201ENST00000307767 RAD50Q92878 1312 aa20.09■□□□□ 0.81
TVP23B-201ENST00000307767 IFIT2P09913 472 aaKnown RBP20.08■□□□□ 0.81
TVP23B-201ENST00000307767 EVA1CP58658 441 aa20.08■□□□□ 0.81
TVP23B-201ENST00000307767 H7C1W4 665 aa20.07■□□□□ 0.8
TVP23B-201ENST00000307767 A0A087WZG4 1122 aa20.07■□□□□ 0.8
TVP23B-201ENST00000307767 TMX3Q96JJ7 454 aa20.07■□□□□ 0.8
TVP23B-201ENST00000307767 FOXO4P98177 505 aa20.06■□□□□ 0.8
TVP23B-201ENST00000307767 CWC27Q6UX04 472 aaKnown RBP20.06■□□□□ 0.8
TVP23B-201ENST00000307767 ZDHHC9Q9Y397 364 aa20.06■□□□□ 0.8
TVP23B-201ENST00000307767 DISP2A7MBM2 1401 aa20.06■□□□□ 0.8
TVP23B-201ENST00000307767 DDX11L8A8MPP1 907 aa20.06■□□□□ 0.8
TVP23B-201ENST00000307767 MCCP23508 829 aa20.06■□□□□ 0.8
TVP23B-201ENST00000307767 CUL4AQ13619 759 aa20.06■□□□□ 0.8
TVP23B-201ENST00000307767 AK9Q5TCS8 1911 aa20.06■□□□□ 0.8
TVP23B-201ENST00000307767 RASEFQ8IZ41 740 aa20.06■□□□□ 0.8
TVP23B-201ENST00000307767 BTG4Q9NY30 223 aa20.06■□□□□ 0.8
TVP23B-201ENST00000307767 NUP188Q5SRE5 1749 aa20.05■□□□□ 0.8
TVP23B-201ENST00000307767 UPF3BQ9BZI7 483 aaKnown RBP20.04■□□□□ 0.8
TVP23B-201ENST00000307767 SNX14Q9Y5W7 946 aa20.04■□□□□ 0.8
TVP23B-201ENST00000307767 AFDNP55196 1824 aaKnown RBP20.04■□□□□ 0.8
TVP23B-201ENST00000307767 EVI5LQ96CN4 794 aa20.04■□□□□ 0.8
TVP23B-201ENST00000307767 CWC22Q9HCG8 908 aaKnown RBP20.04■□□□□ 0.8
TVP23B-201ENST00000307767 PTH1RQ03431 593 aa20.03■□□□□ 0.8
TVP23B-201ENST00000307767 PIGBQ92521 554 aa20.03■□□□□ 0.8
TVP23B-201ENST00000307767 GPATCH3Q96I76 525 aa20.03■□□□□ 0.8
TVP23B-201ENST00000307767 GBP4Q96PP9 640 aa20.03■□□□□ 0.8
TVP23B-201ENST00000307767 ASAP1Q9ULH1 1129 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms