RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 MYL6BP14649 208 aa16.15■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 DNAAF4Q8WXU2 420 aa16.15■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 CCDC87Q9NVE4 849 aa16.15■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 ZBTB1Q9Y2K1 713 aa16.15■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 CNTNAP4Q9C0A0 1308 aa16.15■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 DDX58O95786 925 aaKnown RBP16.14■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 SLC27A3Q5K4L6 730 aa16.14■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 SLC4A10Q6U841 1118 aa16.14■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 PI4KAP2A4QPH2 592 aa16.14■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 PI4KAP1Q8N8J0 262 aa16.14■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 XAGE3Q8WTP9 111 aa16.14■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 ADCY9O60503 1353 aa16.14■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 TXNRD1Q16881 649 aa16.13■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 RC3H1Q5TC82 1133 aaKnown RBP16.13■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 GNAI3P08754 354 aa16.12■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 DEFB132Q7Z7B7 95 aa16.12■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 SRCIN1Q9C0H9 1055 aa16.12■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 C4BP0C0L5 1744 aa16.12■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 ALDH1L1O75891 902 aa16.11■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 TTLL7Q6ZT98 887 aa16.11■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 SMC5Q8IY18 1101 aa16.11■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 MEIS3Q99687 375 aa16.11■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 ANKRD44Q8N8A2 993 aa16.1■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 CAMKK2Q96RR4 588 aa16.1■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 USP44Q9H0E7 712 aa16.1■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 MAP3K2Q9Y2U5 619 aa16.1■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 ANKRD13DQ6ZTN6 518 aa16.09■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 LINS1Q8NG48 757 aa16.09■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 NUP188Q5SRE5 1749 aa16.09■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 RPS6KA4O75676 772 aa16.08■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 GNAI2P04899 355 aa16.08■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 SIRT2Q8IXJ6 389 aa16.08■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 PLBD2Q8NHP8 589 aa16.08■□□□□ 0.17
SHANK2-AS3-201ENST00000307548 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 CEP85Q6P2H3 762 aa16.07■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 RIC3Q7Z5B4 369 aa16.07■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 AMIGO3Q86WK7 504 aa16.07■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 CCDC125Q86Z20 511 aa16.07■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 GCC1Q96CN9 775 aa16.07■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 HDAC5Q9UQL6 1122 aa16.07■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 COL15A1P39059 1388 aa16.06■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 EN1Q05925 392 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 C1orf115Q9H7X2 142 aa16.06■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 UTYO14607 1347 aa16.06■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 GNPATO15228 680 aa16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 HMGB2P26583 209 aaKnown RBP16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 EZH2Q15910 746 aaKnown RBP16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 ZNF330Q9Y3S2 320 aaPredicted RBP16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 BAG6P46379 1132 aa16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 NEXNQ0ZGT2 675 aa16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 ZBTB3Q9H5J0 574 aa16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 DCTPP1Q9H773 170 aa16.05■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 ERVV-1B6SEH8 477 aa16.04■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 CAMTA2O94983 1202 aa16.04■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 IGKV5-2P06315 115 aa16.04■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 AK7Q96M32 723 aa16.04■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 PDZRN3Q9UPQ7 1066 aa16.04■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 HMMRO75330 724 aa16.03■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 ATP8B2P98198 1209 aa16.03■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 ZNF827Q17R98 1081 aa16.03■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 KIF6Q6ZMV9 814 aa16.03■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 TBC1D2BQ9UPU7 963 aa16.03■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 RTCBQ9Y3I0 505 aaKnown RBP16.03■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 SRCAPQ6ZRS2 3230 aa16.03■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 C4AP0C0L4 1744 aa16.02■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 A0A087WZG4 1122 aa16.02■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 SCN7AQ01118 1682 aa16.02■□□□□ 0.16
SHANK2-AS3-201ENST00000307548 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 RGL2O15211 777 aa16.02■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 NUCB1Q02818 461 aa16.02■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 HLFQ16534 295 aa16.02■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 GRM8O00222 908 aa16.01■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 NBPF7P0C2Y1 421 aaPredicted RBP16.01■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 SSFA2P28290 1259 aa16.01■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 CWF19L2Q2TBE0 894 aaKnown RBP16.01■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 ARHGEF1Q92888 912 aaKnown RBP16.01■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 MYD88Q99836 296 aa16.01■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 TUBGCP6Q96RT7 1819 aa16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 TRIM28Q13263 835 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms