RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 ERICH2A1L162 156 aa12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 CCDC8Q9H0W5 538 aaPredicted RBP12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 TECPR2O15040 1411 aa12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 CCDC192P0DO97 292 aa12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 PHAXQ9H814 394 aaKnown RBP12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 CNNM1Q9NRU3 951 aa12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 HSP90AB3PQ58FF7 597 aa12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 ANXA1P04083 346 aa12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 EIF4A1P60842 406 aaKnown RBP12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 RNF214Q8ND24 703 aa12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 HOOK1Q9UJC3 728 aaKnown RBP12.93□□□□□ -0.34
PCDHGC4-201ENST00000306593 ESPNB1AK53 854 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 NFXL1Q6ZNB6 911 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 CFAP45Q9UL16 551 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 USP31Q70CQ4 1352 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 RAD50Q92878 1312 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 DIP2BQ9P265 1576 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 CWC25Q9NXE8 425 aaPredicted RBP12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 SSH2Q76I76 1423 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 NBPF6Q5VWK0 638 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 XAGE3Q8WTP9 111 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 NBPF4Q96M43 638 aa12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 NAT10Q9H0A0 1025 aaKnown RBP12.92□□□□□ -0.34
PCDHGC4-201ENST00000306593 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
PCDHGC4-201ENST00000306593 CCDC83Q8IWF9 413 aa12.91□□□□□ -0.34
PCDHGC4-201ENST00000306593 PRM3Q9NNZ6 103 aa12.91□□□□□ -0.34
PCDHGC4-201ENST00000306593 PDE4CQ08493 712 aa12.91□□□□□ -0.34
PCDHGC4-201ENST00000306593 SART3Q15020 963 aaKnown RBP12.91□□□□□ -0.34
PCDHGC4-201ENST00000306593 COPS6Q7L5N1 327 aa12.91□□□□□ -0.34
PCDHGC4-201ENST00000306593 OTUD7AQ8TE49 926 aaPredicted RBP12.91□□□□□ -0.34
PCDHGC4-201ENST00000306593 OSBPL3Q9H4L5 887 aa12.91□□□□□ -0.34
PCDHGC4-201ENST00000306593 GSPT1P15170 499 aaKnown RBP12.9□□□□□ -0.34
PCDHGC4-201ENST00000306593 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
PCDHGC4-201ENST00000306593 SCAND2PQ9GZW5 306 aaPredicted RBP12.9□□□□□ -0.34
PCDHGC4-201ENST00000306593 VPS37DQ86XT2 251 aa12.9□□□□□ -0.34
PCDHGC4-201ENST00000306593 SSH3Q8TE77 659 aa12.9□□□□□ -0.34
PCDHGC4-201ENST00000306593 UBE3BQ7Z3V4 1068 aa12.9□□□□□ -0.34
PCDHGC4-201ENST00000306593 IFT172Q9UG01 1749 aa12.9□□□□□ -0.34
PCDHGC4-201ENST00000306593 STX6O43752 255 aa12.9□□□□□ -0.34
PCDHGC4-201ENST00000306593 ZCRB1Q8TBF4 217 aaKnown RBP12.9□□□□□ -0.34
PCDHGC4-201ENST00000306593 REREQ9P2R6 1566 aa12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 SYCE3A1L190 88 aa12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 LGR6Q9HBX8 967 aa12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 IBTKQ9P2D0 1353 aaPredicted RBP12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 IMMTQ16891 758 aaKnown RBP12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 RICTORQ6R327 1708 aa12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 ZSCAN30Q86W11 494 aa12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 AMOTL1Q8IY63 956 aa12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 FKBP4Q02790 459 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 STK3Q13188 491 aa12.89□□□□□ -0.35
PCDHGC4-201ENST00000306593 PNMA6EA0A0J9YXQ4 647 aa12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 TPM2P07951 284 aa12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 USP44Q9H0E7 712 aa12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 TNMDQ9H2S6 317 aa12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 COL3A1P02461 1466 aaPredicted RBP12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 CDKL5O76039 1030 aa12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 GNL3LQ9NVN8 582 aaKnown RBP12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 ADGRL3Q9HAR2 1447 aa12.88□□□□□ -0.35
PCDHGC4-201ENST00000306593 IFIT5Q13325 482 aaKnown RBP12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 NFATC2IPQ8NCF5 419 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 SLC39A6Q13433 755 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 NOL10Q9BSC4 688 aaKnown RBP12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 ZSCAN22P10073 491 aaPredicted RBP12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 XRCC6P12956 609 aaKnown RBP eCLIP12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 SIRT2Q8IXJ6 389 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 JMYQ8N9B5 988 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 STAP2Q9UGK3 403 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 XBP1P17861 261 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 SLC52A2Q9HAB3 445 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 OVOS2A0A0J9YW53 1432 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 OVOS2Q6IE36 1432 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 ADGRB2O60241 1585 aa12.87□□□□□ -0.35
PCDHGC4-201ENST00000306593 NPHP4O75161 1426 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 KDRP35968 1356 aa12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 GJB2P29033 226 aa12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 HSP90AA2PQ14568 343 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 CWF19L2Q2TBE0 894 aaKnown RBP12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 ZSCAN23Q3MJ62 389 aa12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 SDF4Q9BRK5 362 aa12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 IL15P40933 162 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 UBE2HP62256 183 aa12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 DHX8Q14562 1220 aaKnown RBP12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 VPS53Q5VIR6 699 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms