RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 CCDC144CPQ8IYA2 1237 aa22.36■■□□□ 1.17
CHRNB1-201ENST00000306071 TDRD7Q8NHU6 1098 aaKnown RBP22.36■■□□□ 1.17
CHRNB1-201ENST00000306071 PTPN14Q15678 1187 aa22.36■■□□□ 1.17
CHRNB1-201ENST00000306071 CNTROBQ8N137 903 aa22.36■■□□□ 1.17
CHRNB1-201ENST00000306071 NECAB1Q8N987 351 aa22.36■■□□□ 1.17
CHRNB1-201ENST00000306071 CCDC171Q6TFL3 1326 aa22.35■■□□□ 1.17
CHRNB1-201ENST00000306071 EIF4A2Q14240 407 aaKnown RBP22.35■■□□□ 1.17
CHRNB1-201ENST00000306071 VPS53Q5VIR6 699 aa22.35■■□□□ 1.17
CHRNB1-201ENST00000306071 DNAJC25Q9H1X3 360 aa22.35■■□□□ 1.17
CHRNB1-201ENST00000306071 SLC52A1Q9NWF4 448 aa22.35■■□□□ 1.17
CHRNB1-201ENST00000306071 CYP46A1Q9Y6A2 500 aa22.35■■□□□ 1.17
CHRNB1-201ENST00000306071 MYO5BQ9ULV0 1848 aa22.34■■□□□ 1.17
CHRNB1-201ENST00000306071 ELP1O95163 1332 aa22.34■■□□□ 1.17
CHRNB1-201ENST00000306071 FBXO38Q6PIJ6 1188 aa22.34■■□□□ 1.17
CHRNB1-201ENST00000306071 SOS1Q07889 1333 aaPredicted RBP22.34■■□□□ 1.17
CHRNB1-201ENST00000306071 USP27XA6NNY8 438 aa22.34■■□□□ 1.17
CHRNB1-201ENST00000306071 ELF2Q15723 593 aa22.34■■□□□ 1.17
CHRNB1-201ENST00000306071 PI4K2BQ8TCG2 481 aa22.34■■□□□ 1.17
CHRNB1-201ENST00000306071 DDX19AQ9NUU7 478 aaKnown RBP22.34■■□□□ 1.17
CHRNB1-201ENST00000306071 CDC37L1Q7L3B6 337 aa22.33■■□□□ 1.17
CHRNB1-201ENST00000306071 SURF6O75683 361 aaKnown RBP22.33■■□□□ 1.16
CHRNB1-201ENST00000306071 FLIIQ13045 1269 aa22.33■■□□□ 1.16
CHRNB1-201ENST00000306071 ME3Q16798 604 aa22.33■■□□□ 1.16
CHRNB1-201ENST00000306071 ADCK5Q3MIX3 580 aa22.33■■□□□ 1.16
CHRNB1-201ENST00000306071 LRRC8AQ8IWT6 810 aa22.33■■□□□ 1.16
CHRNB1-201ENST00000306071 SPATA32Q96LK8 384 aa22.33■■□□□ 1.16
CHRNB1-201ENST00000306071 CALCOCO1Q9P1Z2 691 aa22.33■■□□□ 1.16
CHRNB1-201ENST00000306071 DDX54Q8TDD1 881 aaKnown RBP22.32■■□□□ 1.16
CHRNB1-201ENST00000306071 CLSTN2Q9H4D0 955 aa22.32■■□□□ 1.16
CHRNB1-201ENST00000306071 TFIP11Q9UBB9 837 aaKnown RBP22.32■■□□□ 1.16
CHRNB1-201ENST00000306071 PREX1Q8TCU6 1659 aa22.32■■□□□ 1.16
CHRNB1-201ENST00000306071 PRPF40BQ6NWY9 871 aaKnown RBP22.32■■□□□ 1.16
CHRNB1-201ENST00000306071 NECTIN2Q92692 538 aa22.32■■□□□ 1.16
CHRNB1-201ENST00000306071 ERO1AQ96HE7 468 aa22.32■■□□□ 1.16
CHRNB1-201ENST00000306071 CRB1P82279 1406 aa22.32■■□□□ 1.16
CHRNB1-201ENST00000306071 SCAND2PQ9GZW5 306 aaPredicted RBP22.31■■□□□ 1.16
CHRNB1-201ENST00000306071 ST7Q9NRC1 585 aa22.31■■□□□ 1.16
CHRNB1-201ENST00000306071 UBTFL1P0CB47 393 aaPredicted RBP22.31■■□□□ 1.16
CHRNB1-201ENST00000306071 RBM6P78332 1123 aaKnown RBP22.31■■□□□ 1.16
CHRNB1-201ENST00000306071 ST3GAL1Q11201 340 aa22.31■■□□□ 1.16
CHRNB1-201ENST00000306071 ARID5BQ14865 1188 aa22.31■■□□□ 1.16
CHRNB1-201ENST00000306071 GOLGA6L19H0YKK7 550 aa22.3■■□□□ 1.16
CHRNB1-201ENST00000306071 NPHP1O15259 732 aa22.3■■□□□ 1.16
CHRNB1-201ENST00000306071 SKILP12757 684 aa22.3■■□□□ 1.16
CHRNB1-201ENST00000306071 FAM53CQ9NYF3 392 aa22.3■■□□□ 1.16
CHRNB1-201ENST00000306071 NPHP3Q7Z494 1330 aa22.3■■□□□ 1.16
CHRNB1-201ENST00000306071 CDC25BP30305 580 aa22.3■■□□□ 1.16
CHRNB1-201ENST00000306071 BICD2Q8TD16 824 aa22.3■■□□□ 1.16
CHRNB1-201ENST00000306071 TRMT1Q9NXH9 659 aaKnown RBP22.3■■□□□ 1.16
CHRNB1-201ENST00000306071 TTC21AQ8NDW8 1320 aa22.29■■□□□ 1.16
CHRNB1-201ENST00000306071 RAB11FIP3O75154 756 aa22.29■■□□□ 1.16
CHRNB1-201ENST00000306071 NYAP1Q6ZVC0 841 aa22.29■■□□□ 1.16
CHRNB1-201ENST00000306071 RHPN1Q8TCX5 695 aa22.29■■□□□ 1.16
CHRNB1-201ENST00000306071 ZSWIM6Q9HCJ5 1215 aa22.29■■□□□ 1.16
CHRNB1-201ENST00000306071 ALKQ9UM73 1620 aa22.29■■□□□ 1.16
CHRNB1-201ENST00000306071 NEMFO60524 1076 aa22.29■■□□□ 1.16
CHRNB1-201ENST00000306071 PDCP20941 246 aa22.29■■□□□ 1.16
CHRNB1-201ENST00000306071 IPO4Q8TEX9 1081 aaKnown RBP22.29■■□□□ 1.16
CHRNB1-201ENST00000306071 ARHGEF10O15013 1369 aa22.28■■□□□ 1.16
CHRNB1-201ENST00000306071 NR1I2O75469 434 aa22.28■■□□□ 1.16
CHRNB1-201ENST00000306071 PTH1RQ03431 593 aa22.28■■□□□ 1.16
CHRNB1-201ENST00000306071 RBM43Q6ZSC3 357 aaKnown RBP22.28■■□□□ 1.16
CHRNB1-201ENST00000306071 SSH3Q8TE77 659 aa22.28■■□□□ 1.16
CHRNB1-201ENST00000306071 FOXO3O43524 673 aa22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 SLU7O95391 586 aaKnown RBP22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 MAPK8IP2Q13387 824 aaPredicted RBP22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 SLFNL1Q499Z3 407 aa22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 RUFY2Q8WXA3 655 aa22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 DNAJC2Q99543 621 aaKnown RBP22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 NOL10Q9BSC4 688 aaKnown RBP22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 TPCN1Q9ULQ1 816 aa22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 PPP6R1Q9UPN7 881 aa22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 LEO1Q8WVC0 666 aaPredicted RBP22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 USP44Q9H0E7 712 aa22.27■■□□□ 1.16
CHRNB1-201ENST00000306071 MLH3Q9UHC1 1453 aa22.26■■□□□ 1.15
CHRNB1-201ENST00000306071 PDIA4P13667 645 aaKnown RBP22.26■■□□□ 1.15
CHRNB1-201ENST00000306071 PPP1R42Q7Z4L9 355 aa22.26■■□□□ 1.15
CHRNB1-201ENST00000306071 TM6SF1Q9BZW5 370 aa22.26■■□□□ 1.15
CHRNB1-201ENST00000306071 CCDC30Q5VVM6 783 aa22.26■■□□□ 1.15
CHRNB1-201ENST00000306071 FILIP1Q7Z7B0 1213 aa22.26■■□□□ 1.15
CHRNB1-201ENST00000306071 ZKSCAN1P17029 563 aaPredicted RBP22.25■■□□□ 1.15
CHRNB1-201ENST00000306071 FAM193AP78312 1265 aa22.25■■□□□ 1.15
CHRNB1-201ENST00000306071 ZNF446Q9NWS9 450 aa22.25■■□□□ 1.15
CHRNB1-201ENST00000306071 CPS1P31327 1500 aa22.25■■□□□ 1.15
CHRNB1-201ENST00000306071 KIF1BPQ96EK5 621 aa22.25■■□□□ 1.15
CHRNB1-201ENST00000306071 NCKAP5LQ9HCH0 1330 aa22.25■■□□□ 1.15
CHRNB1-201ENST00000306071 CCDC69A6NI79 296 aa22.24■■□□□ 1.15
CHRNB1-201ENST00000306071 CAVIN2O95810 425 aa22.24■■□□□ 1.15
CHRNB1-201ENST00000306071 BMS1Q14692 1282 aaKnown RBP22.24■■□□□ 1.15
CHRNB1-201ENST00000306071 MRFAP1L1Q96HT8 127 aa22.24■■□□□ 1.15
CHRNB1-201ENST00000306071 USP16Q9Y5T5 823 aa22.24■■□□□ 1.15
CHRNB1-201ENST00000306071 WASLO00401 505 aaPredicted RBP22.23■■□□□ 1.15
CHRNB1-201ENST00000306071 RNF20Q5VTR2 975 aa22.23■■□□□ 1.15
CHRNB1-201ENST00000306071 CREBRFQ8IUR6 639 aa22.23■■□□□ 1.15
CHRNB1-201ENST00000306071 STAG3Q9UJ98 1225 aa22.23■■□□□ 1.15
CHRNB1-201ENST00000306071 TMEM131LA2VDJ0 1609 aa22.23■■□□□ 1.15
CHRNB1-201ENST00000306071 SARM1Q6SZW1 724 aa22.23■■□□□ 1.15
CHRNB1-201ENST00000306071 CCAR2Q8N163 923 aaKnown RBP22.23■■□□□ 1.15
CHRNB1-201ENST00000306071 SRGAP3O43295 1099 aa22.22■■□□□ 1.15
CHRNB1-201ENST00000306071 GTF3C6Q969F1 213 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms