RNA–Protein interactions for RNA: ENST00000303657.9

RFX2-201, Transcript of regulatory factor X2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RFX2, Length 3,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-201ENST00000303657 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
RFX2-201ENST00000303657 RABEP1Q15276 862 aa12.82□□□□□ -0.36
RFX2-201ENST00000303657 DRC7Q8IY82 874 aa12.82□□□□□ -0.36
RFX2-201ENST00000303657 USP25Q9UHP3 1055 aa12.82□□□□□ -0.36
RFX2-201ENST00000303657 CRB1P82279 1406 aa12.82□□□□□ -0.36
RFX2-201ENST00000303657 KIF20BQ96Q89 1820 aa12.82□□□□□ -0.36
RFX2-201ENST00000303657 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
RFX2-201ENST00000303657 IFNL2Q8IZJ0 200 aa12.81□□□□□ -0.36
RFX2-201ENST00000303657 CCDC94Q9BW85 323 aaPredicted RBP12.81□□□□□ -0.36
RFX2-201ENST00000303657 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.81□□□□□ -0.36
RFX2-201ENST00000303657 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
RFX2-201ENST00000303657 NEUROD6Q96NK8 337 aa12.81□□□□□ -0.36
RFX2-201ENST00000303657 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
RFX2-201ENST00000303657 CEP170BQ9Y4F5 1589 aaPredicted RBP12.81□□□□□ -0.36
RFX2-201ENST00000303657 NRXN3Q9Y4C0 1643 aa12.81□□□□□ -0.36
RFX2-201ENST00000303657 FGD1P98174 961 aa12.8□□□□□ -0.36
RFX2-201ENST00000303657 SNX21Q969T3 373 aa12.8□□□□□ -0.36
RFX2-201ENST00000303657 KIF1BPQ96EK5 621 aa12.8□□□□□ -0.36
RFX2-201ENST00000303657 ZNF496Q96IT1 587 aaPredicted RBP12.8□□□□□ -0.36
RFX2-201ENST00000303657 KIF3AQ9Y496 699 aa12.8□□□□□ -0.36
RFX2-201ENST00000303657 TSPY26PQ9H489 355 aa12.8□□□□□ -0.36
RFX2-201ENST00000303657 ZBTB3Q9H5J0 574 aa12.8□□□□□ -0.36
RFX2-201ENST00000303657 UBR1Q8IWV7 1749 aa12.8□□□□□ -0.36
RFX2-201ENST00000303657 GIGYF1O75420 1035 aaPredicted RBP12.79□□□□□ -0.36
RFX2-201ENST00000303657 ZNF790Q6PG37 636 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 UBE3BQ7Z3V4 1068 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 ZNF592Q92610 1267 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 HDAC5Q9UQL6 1122 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 HSP90AB4PQ58FF6 505 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
RFX2-201ENST00000303657 KSR2Q6VAB6 950 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 CNTROBQ8N137 903 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
RFX2-201ENST00000303657 SYAP1Q96A49 352 aaPredicted RBP12.79□□□□□ -0.36
RFX2-201ENST00000303657 DNAJC2Q99543 621 aaKnown RBP12.79□□□□□ -0.36
RFX2-201ENST00000303657 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
RFX2-201ENST00000303657 TAF7LQ5H9L4 462 aa12.78□□□□□ -0.36
RFX2-201ENST00000303657 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
RFX2-201ENST00000303657 TRERF1Q96PN7 1200 aa12.78□□□□□ -0.36
RFX2-201ENST00000303657 USP26Q9BXU7 913 aa12.78□□□□□ -0.36
RFX2-201ENST00000303657 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
RFX2-201ENST00000303657 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
RFX2-201ENST00000303657 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
RFX2-201ENST00000303657 FSD1Q9BTV5 496 aa12.78□□□□□ -0.36
RFX2-201ENST00000303657 ANKARQ7Z5J8 1434 aa12.77□□□□□ -0.36
RFX2-201ENST00000303657 KDRP35968 1356 aa12.77□□□□□ -0.36
RFX2-201ENST00000303657 A0A087WZG4 1122 aa12.77□□□□□ -0.37
RFX2-201ENST00000303657 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
RFX2-201ENST00000303657 TMEM63CQ9P1W3 806 aa12.77□□□□□ -0.37
RFX2-201ENST00000303657 ERBB3P21860 1342 aa12.77□□□□□ -0.37
RFX2-201ENST00000303657 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
RFX2-201ENST00000303657 LMBRD1Q9NUN5 540 aa12.77□□□□□ -0.37
RFX2-201ENST00000303657 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
RFX2-201ENST00000303657 GRM8O00222 908 aa12.76□□□□□ -0.37
RFX2-201ENST00000303657 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
RFX2-201ENST00000303657 BEND3Q5T5X7 828 aa12.76□□□□□ -0.37
RFX2-201ENST00000303657 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
RFX2-201ENST00000303657 BICC1Q9H694 974 aaKnown RBP12.76□□□□□ -0.37
RFX2-201ENST00000303657 ADGRL3Q9HAR2 1447 aa12.76□□□□□ -0.37
RFX2-201ENST00000303657 ERICH4A6NGS2 130 aa12.76□□□□□ -0.37
RFX2-201ENST00000303657 U2AF2P26368 475 aaKnown RBP eCLIP12.76□□□□□ -0.37
RFX2-201ENST00000303657 NSFL1CQ9UNZ2 370 aaKnown RBP12.76□□□□□ -0.37
RFX2-201ENST00000303657 ITSN1Q15811 1721 aa12.75□□□□□ -0.37
RFX2-201ENST00000303657 ZNF500O60304 480 aaPredicted RBP12.75□□□□□ -0.37
RFX2-201ENST00000303657 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
RFX2-201ENST00000303657 LRSAM1Q6UWE0 723 aa12.75□□□□□ -0.37
RFX2-201ENST00000303657 ESYT1Q9BSJ8 1104 aa12.75□□□□□ -0.37
RFX2-201ENST00000303657 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
RFX2-201ENST00000303657 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
RFX2-201ENST00000303657 NDUFB9Q9Y6M9 179 aa12.75□□□□□ -0.37
RFX2-201ENST00000303657 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.37
RFX2-201ENST00000303657 GPT2Q8TD30 523 aa12.75□□□□□ -0.37
RFX2-201ENST00000303657 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
RFX2-201ENST00000303657 ZCRB1Q8TBF4 217 aaKnown RBP12.74□□□□□ -0.37
RFX2-201ENST00000303657 DDX21Q9NR30 783 aaKnown RBP eCLIP12.74□□□□□ -0.37
RFX2-201ENST00000303657 SSH2Q76I76 1423 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 RAB11FIP3O75154 756 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 ZNF445P59923 1031 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 SUCLG2Q96I99 432 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 ARHGAP23Q9P227 1491 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 RIMS1Q86UR5 1692 aaKnown RBP12.74□□□□□ -0.37
RFX2-201ENST00000303657 CPA1P15085 419 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 PHKG2P15735 406 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 CHMLP26374 656 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 LINS1Q8NG48 757 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 FER1L4A9Z1Z3 1794 aa12.74□□□□□ -0.37
RFX2-201ENST00000303657 A1BGP04217 495 aa12.73□□□□□ -0.37
RFX2-201ENST00000303657 DMTNQ08495 405 aa12.73□□□□□ -0.37
RFX2-201ENST00000303657 ZBTB22O15209 634 aa12.73□□□□□ -0.37
RFX2-201ENST00000303657 TERF1P54274 439 aa12.73□□□□□ -0.37
RFX2-201ENST00000303657 HCLS1P14317 486 aaPredicted RBP12.73□□□□□ -0.37
RFX2-201ENST00000303657 RUFY2Q8WXA3 655 aa12.73□□□□□ -0.37
RFX2-201ENST00000303657 C3P01024 1663 aa12.73□□□□□ -0.37
RFX2-201ENST00000303657 HS1BP3Q53T59 392 aa12.72□□□□□ -0.37
RFX2-201ENST00000303657 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
RFX2-201ENST00000303657 TCEANC2Q96MN5 208 aa12.72□□□□□ -0.37
RFX2-201ENST00000303657 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
RFX2-201ENST00000303657 SLIT1O75093 1534 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms