RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 PRKCSHP14314 528 aaPredicted RBP22.67■■□□□ 1.22
RNF139-201ENST00000303545 NUCB2P80303 420 aa22.67■■□□□ 1.22
RNF139-201ENST00000303545 HSP90AB4PQ58FF6 505 aa22.67■■□□□ 1.22
RNF139-201ENST00000303545 AACSQ86V21 672 aa22.67■■□□□ 1.22
RNF139-201ENST00000303545 CCDC8Q9H0W5 538 aaPredicted RBP22.67■■□□□ 1.22
RNF139-201ENST00000303545 DDX49Q9Y6V7 483 aaKnown RBP22.66■■□□□ 1.22
RNF139-201ENST00000303545 GOLGA6L22H0YM25 854 aa22.66■■□□□ 1.22
RNF139-201ENST00000303545 IFIT2P09913 472 aaKnown RBP22.66■■□□□ 1.22
RNF139-201ENST00000303545 TTC5Q8N0Z6 440 aa22.66■■□□□ 1.22
RNF139-201ENST00000303545 CYP2E1P05181 493 aaPredicted RBP22.65■■□□□ 1.22
RNF139-201ENST00000303545 MTX1Q13505 466 aa22.65■■□□□ 1.22
RNF139-201ENST00000303545 CADPS2Q86UW7 1296 aa22.65■■□□□ 1.22
RNF139-201ENST00000303545 SGSM2O43147 1006 aa22.64■■□□□ 1.22
RNF139-201ENST00000303545 EPHA10Q5JZY3 1008 aa22.64■■□□□ 1.22
RNF139-201ENST00000303545 TLR7Q9NYK1 1049 aaKnown RBP22.64■■□□□ 1.22
RNF139-201ENST00000303545 SCN11AQ9UI33 1791 aa22.64■■□□□ 1.22
RNF139-201ENST00000303545 DTNBO60941 627 aa22.64■■□□□ 1.21
RNF139-201ENST00000303545 CWC22Q9HCG8 908 aaKnown RBP22.64■■□□□ 1.21
RNF139-201ENST00000303545 SASH1O94885 1247 aa22.63■■□□□ 1.21
RNF139-201ENST00000303545 FOXD4L6Q3SYB3 417 aaPredicted RBP22.63■■□□□ 1.21
RNF139-201ENST00000303545 FOXD4L3Q6VB84 417 aaPredicted RBP22.63■■□□□ 1.21
RNF139-201ENST00000303545 ATP5J2-PTCD1G3V325 749 aa22.63■■□□□ 1.21
RNF139-201ENST00000303545 PTCD1O75127 700 aaKnown RBP22.63■■□□□ 1.21
RNF139-201ENST00000303545 CPA1P15085 419 aa22.63■■□□□ 1.21
RNF139-201ENST00000303545 TNS3Q68CZ2 1445 aa22.63■■□□□ 1.21
RNF139-201ENST00000303545 NEURL1BA8MQ27 555 aa22.62■■□□□ 1.21
RNF139-201ENST00000303545 CABP4P57796 275 aa22.62■■□□□ 1.21
RNF139-201ENST00000303545 RASEFQ8IZ41 740 aa22.62■■□□□ 1.21
RNF139-201ENST00000303545 GRPEL1Q9HAV7 217 aa22.62■■□□□ 1.21
RNF139-201ENST00000303545 COL18A1P39060 1754 aa22.62■■□□□ 1.21
RNF139-201ENST00000303545 SPATA31A3Q5VYP0 1347 aa22.62■■□□□ 1.21
RNF139-201ENST00000303545 GLRX3O76003 335 aaKnown RBP22.62■■□□□ 1.21
RNF139-201ENST00000303545 HSPA4P34932 840 aa22.62■■□□□ 1.21
RNF139-201ENST00000303545 NEXNQ0ZGT2 675 aa22.62■■□□□ 1.21
RNF139-201ENST00000303545 G3BP1Q13283 466 aaKnown RBP eCLIP22.62■■□□□ 1.21
RNF139-201ENST00000303545 SKOR2Q2VWA4 1001 aaPredicted RBP22.62■■□□□ 1.21
RNF139-201ENST00000303545 LARP1Q6PKG0 1096 aaKnown RBP22.62■■□□□ 1.21
RNF139-201ENST00000303545 ECHDC1Q9NTX5 307 aa22.62■■□□□ 1.21
RNF139-201ENST00000303545 DDX54Q8TDD1 881 aaKnown RBP22.61■■□□□ 1.21
RNF139-201ENST00000303545 EAF2Q96CJ1 260 aaPredicted RBP22.61■■□□□ 1.21
RNF139-201ENST00000303545 LSG1Q9H089 658 aaKnown RBP22.61■■□□□ 1.21
RNF139-201ENST00000303545 DIAPH3Q9NSV4 1193 aa22.61■■□□□ 1.21
RNF139-201ENST00000303545 PRPF40AO75400 957 aaKnown RBP22.61■■□□□ 1.21
RNF139-201ENST00000303545 DCAF5Q96JK2 942 aa22.61■■□□□ 1.21
RNF139-201ENST00000303545 ANAPC15P60006 121 aa22.61■■□□□ 1.21
RNF139-201ENST00000303545 SNX14Q9Y5W7 946 aa22.61■■□□□ 1.21
RNF139-201ENST00000303545 ADAMTS7Q9UKP4 1686 aa22.6■■□□□ 1.21
RNF139-201ENST00000303545 SNRPA1P09661 255 aaKnown RBP22.6■■□□□ 1.21
RNF139-201ENST00000303545 GCKRQ14397 625 aa22.6■■□□□ 1.21
RNF139-201ENST00000303545 ANKRD13DQ6ZTN6 518 aa22.6■■□□□ 1.21
RNF139-201ENST00000303545 PTH1RQ03431 593 aa22.6■■□□□ 1.21
RNF139-201ENST00000303545 CLEC17AQ6ZS10 378 aa22.6■■□□□ 1.21
RNF139-201ENST00000303545 KIAA1211Q6ZU35 1233 aa22.6■■□□□ 1.21
RNF139-201ENST00000303545 TTC41PQ6P2S7 1318 aa22.59■■□□□ 1.21
RNF139-201ENST00000303545 RAD50Q92878 1312 aa22.59■■□□□ 1.21
RNF139-201ENST00000303545 MRE11P49959 708 aa22.59■■□□□ 1.21
RNF139-201ENST00000303545 BRINP3Q76B58 766 aa22.59■■□□□ 1.21
RNF139-201ENST00000303545 METTL22Q9BUU2 404 aaPredicted RBP22.59■■□□□ 1.21
RNF139-201ENST00000303545 LMBRD1Q9NUN5 540 aa22.59■■□□□ 1.21
RNF139-201ENST00000303545 CRYBG1Q9Y4K1 1723 aa22.59■■□□□ 1.21
RNF139-201ENST00000303545 FMNL2Q96PY5 1086 aa22.58■■□□□ 1.21
RNF139-201ENST00000303545 BOLA2Q9H3K6 86 aa22.58■■□□□ 1.21
RNF139-201ENST00000303545 PRDM11Q9NQV5 511 aa22.58■■□□□ 1.21
RNF139-201ENST00000303545 CAVIN1Q6NZI2 390 aaKnown RBP22.58■■□□□ 1.2
RNF139-201ENST00000303545 TOM1L2Q6ZVM7 507 aa22.58■■□□□ 1.2
RNF139-201ENST00000303545 UBE3BQ7Z3V4 1068 aa22.58■■□□□ 1.2
RNF139-201ENST00000303545 ERC1Q8IUD2 1116 aa22.58■■□□□ 1.2
RNF139-201ENST00000303545 UTYO14607 1347 aa22.57■■□□□ 1.2
RNF139-201ENST00000303545 GPATCH3Q96I76 525 aa22.57■■□□□ 1.2
RNF139-201ENST00000303545 CCDC9Q9Y3X0 531 aaKnown RBP22.57■■□□□ 1.2
RNF139-201ENST00000303545 USP42Q9H9J4 1324 aaKnown RBP22.57■■□□□ 1.2
RNF139-201ENST00000303545 LRP10Q7Z4F1 713 aa22.56■■□□□ 1.2
RNF139-201ENST00000303545 FAM227BQ96M60 508 aa22.56■■□□□ 1.2
RNF139-201ENST00000303545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.56■■□□□ 1.21e-6■■■■□ 25.6
RNF139-201ENST00000303545 RBM27Q9P2N5 1060 aaKnown RBP22.56■■□□□ 1.2
RNF139-201ENST00000303545 PTMSP20962 102 aa22.56■■□□□ 1.2
RNF139-201ENST00000303545 MCM2P49736 904 aa22.56■■□□□ 1.2
RNF139-201ENST00000303545 KLHL40Q2TBA0 621 aa22.56■■□□□ 1.2
RNF139-201ENST00000303545 NDUFB9Q9Y6M9 179 aa22.56■■□□□ 1.2
RNF139-201ENST00000303545 CUL4AQ13619 759 aa22.55■■□□□ 1.2
RNF139-201ENST00000303545 PRPF40BQ6NWY9 871 aaKnown RBP22.55■■□□□ 1.2
RNF139-201ENST00000303545 EDC3Q96F86 508 aaKnown RBP22.55■■□□□ 1.2
RNF139-201ENST00000303545 HDAC5Q9UQL6 1122 aa22.55■■□□□ 1.2
RNF139-201ENST00000303545 STRN4Q9NRL3 753 aa22.55■■□□□ 1.2
RNF139-201ENST00000303545 DCCP43146 1447 aa22.54■■□□□ 1.2
RNF139-201ENST00000303545 CASTP20810 708 aaKnown RBP22.53■■□□□ 1.2
RNF139-201ENST00000303545 ADCK5Q3MIX3 580 aa22.53■■□□□ 1.2
RNF139-201ENST00000303545 TPRNQ4KMQ1 711 aa22.53■■□□□ 1.2
RNF139-201ENST00000303545 NSFL1CQ9UNZ2 370 aaKnown RBP22.53■■□□□ 1.2
RNF139-201ENST00000303545 AK2P54819 239 aa22.53■■□□□ 1.2
RNF139-201ENST00000303545 GPT2Q8TD30 523 aa22.53■■□□□ 1.2
RNF139-201ENST00000303545 A0A087WZG4 1122 aa22.52■■□□□ 1.2
RNF139-201ENST00000303545 NMIQ13287 307 aaPredicted RBP22.52■■□□□ 1.2
RNF139-201ENST00000303545 CHMP3Q9Y3E7 222 aa22.52■■□□□ 1.2
RNF139-201ENST00000303545 EVI5LQ96CN4 794 aa22.51■■□□□ 1.19
RNF139-201ENST00000303545 RRAGDQ9NQL2 400 aaPredicted RBP22.51■■□□□ 1.19
RNF139-201ENST00000303545 ZCRB1Q8TBF4 217 aaKnown RBP22.51■■□□□ 1.19
RNF139-201ENST00000303545 NBPF26B4DH59 902 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 A1BGP04217 495 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 COL9A3Q14050 684 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms