RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 PIK3R4Q99570 1358 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 NUP88Q99567 741 aaPredicted RBP16.16■□□□□ 0.18
PRKCB-201ENST00000303531 ANKIB1Q9P2G1 1089 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 C14orf93Q9H972 538 aaKnown RBP16.15■□□□□ 0.18
PRKCB-201ENST00000303531 PI4KAP2A4QPH2 592 aa16.15■□□□□ 0.18
PRKCB-201ENST00000303531 ZPR1O75312 459 aa16.15■□□□□ 0.18
PRKCB-201ENST00000303531 DHX37Q8IY37 1157 aaKnown RBP16.15■□□□□ 0.18
PRKCB-201ENST00000303531 PI4KAP1Q8N8J0 262 aa16.15■□□□□ 0.18
PRKCB-201ENST00000303531 HDAC1Q13547 482 aaPredicted RBP16.15■□□□□ 0.18
PRKCB-201ENST00000303531 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
PRKCB-201ENST00000303531 TMOD2Q9NZR1 351 aa16.15■□□□□ 0.18
PRKCB-201ENST00000303531 NLRP5P59047 1200 aa16.15■□□□□ 0.18
PRKCB-201ENST00000303531 KLHL40Q2TBA0 621 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 NEMFO60524 1076 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 TMC6Q7Z403 805 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 ZNF444Q8N0Y2 327 aaPredicted RBP16.14■□□□□ 0.17
PRKCB-201ENST00000303531 TMX1Q9H3N1 280 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 UBE2HP62256 183 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 NEK1Q96PY6 1258 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 CCDC194A0A1B0GVG4 234 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 CCDC144CPQ8IYA2 1237 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 PIP4K2BP78356 416 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 GPTP24298 496 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 UBA5Q9GZZ9 404 aa16.14■□□□□ 0.17
PRKCB-201ENST00000303531 CATIPQ7Z7H3 387 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 SNRKQ9NRH2 765 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 ATP5J2-PTCD1G3V325 749 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 GSDMDP57764 484 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 HAND2P61296 217 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 ZSCAN23Q3MJ62 389 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 MAP9Q49MG5 647 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 GBP2P32456 591 aaPredicted RBP16.13■□□□□ 0.17
PRKCB-201ENST00000303531 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
PRKCB-201ENST00000303531 RAB34Q9BZG1 259 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 PRDM10Q9NQV6 1147 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 ZNF165P49910 485 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 UBE3BQ7Z3V4 1068 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 CGNQ9P2M7 1197 aaKnown RBP16.13■□□□□ 0.17
PRKCB-201ENST00000303531 SDSP20132 328 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 TMX3Q96JJ7 454 aa16.13■□□□□ 0.17
PRKCB-201ENST00000303531 IARSP41252 1262 aaKnown RBP16.12■□□□□ 0.17
PRKCB-201ENST00000303531 TMEM266Q2M3C6 531 aa16.12■□□□□ 0.17
PRKCB-201ENST00000303531 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
PRKCB-201ENST00000303531 YEATS4O95619 227 aa16.12■□□□□ 0.17
PRKCB-201ENST00000303531 HMG20BQ9P0W2 317 aa16.12■□□□□ 0.17
PRKCB-201ENST00000303531 TMEM67Q5HYA8 995 aa16.12■□□□□ 0.17
PRKCB-201ENST00000303531 ORC3Q9UBD5 711 aaPredicted RBP16.12■□□□□ 0.17
PRKCB-201ENST00000303531 CCDC96Q2M329 555 aa16.12■□□□□ 0.17
PRKCB-201ENST00000303531 DNA2P51530 1060 aa16.12■□□□□ 0.17
PRKCB-201ENST00000303531 RAB11FIP4Q86YS3 637 aa16.12■□□□□ 0.17
PRKCB-201ENST00000303531 RALGAPBQ86X10 1494 aa16.12■□□□□ 0.17
PRKCB-201ENST00000303531 FBLN1P23142 703 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 TNIP1Q15025 636 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 FGFR1OPO95684 399 aaKnown RBP16.11■□□□□ 0.17
PRKCB-201ENST00000303531 MICU3Q86XE3 530 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 CWC25Q9NXE8 425 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-201ENST00000303531 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-201ENST00000303531 VPS36Q86VN1 386 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 RHPN1Q8TCX5 695 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 POTEJP0CG39 1038 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 DESP17661 470 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 MEIS3Q99687 375 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 USP8P40818 1118 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 PANK2Q9BZ23 570 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 ANXA1P04083 346 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 MCM5P33992 734 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 LDHAL6AQ6ZMR3 332 aa16.11■□□□□ 0.17
PRKCB-201ENST00000303531 LUZP1Q86V48 1076 aa16.1■□□□□ 0.17
PRKCB-201ENST00000303531 ISM2Q6H9L7 571 aa16.1■□□□□ 0.17
PRKCB-201ENST00000303531 USO1O60763 962 aaKnown RBP16.1■□□□□ 0.17
PRKCB-201ENST00000303531 TDRD12Q587J7 1177 aaKnown RBP16.1■□□□□ 0.17
PRKCB-201ENST00000303531 MCM3P25205 808 aa16.1■□□□□ 0.17
PRKCB-201ENST00000303531 METAP2P50579 478 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■□□□□ 10.7
PRKCB-201ENST00000303531 PRKCSHP14314 528 aaPredicted RBP16.1■□□□□ 0.17
PRKCB-201ENST00000303531 HCLS1P14317 486 aaPredicted RBP16.1■□□□□ 0.17
PRKCB-201ENST00000303531 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
PRKCB-201ENST00000303531 ZSCAN22P10073 491 aaPredicted RBP16.1■□□□□ 0.17
PRKCB-201ENST00000303531 EZRP15311 586 aaKnown RBP16.1■□□□□ 0.17
PRKCB-201ENST00000303531 UVSSAQ2YD98 709 aa16.1■□□□□ 0.17
PRKCB-201ENST00000303531 SHTN1A0MZ66 631 aa16.09■□□□□ 0.17
PRKCB-201ENST00000303531 GIMAP6Q6P9H5 292 aa16.09■□□□□ 0.17
PRKCB-201ENST00000303531 JARID2Q92833 1246 aaPredicted RBP16.09■□□□□ 0.17
PRKCB-201ENST00000303531 ACEP12821 1306 aa16.09■□□□□ 0.17
PRKCB-201ENST00000303531 NCOA7Q8NI08 942 aa16.09■□□□□ 0.17
PRKCB-201ENST00000303531 NECAB1Q8N987 351 aa16.09■□□□□ 0.17
PRKCB-201ENST00000303531 CETN2P41208 172 aa16.09■□□□□ 0.17
PRKCB-201ENST00000303531 CCDC113Q9H0I3 377 aa16.09■□□□□ 0.17
PRKCB-201ENST00000303531 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
PRKCB-201ENST00000303531 MTIF2P46199 727 aaKnown RBP16.09■□□□□ 0.17
PRKCB-201ENST00000303531 LRSAM1Q6UWE0 723 aa16.09■□□□□ 0.17
PRKCB-201ENST00000303531 PAFAH1B1P43034 410 aa16.08■□□□□ 0.17
PRKCB-201ENST00000303531 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-201ENST00000303531 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRKCB-201ENST00000303531 ASXL1Q8IXJ9 1541 aa16.08■□□□□ 0.16
PRKCB-201ENST00000303531 SNW1Q13573 536 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms