RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 SPG7Q9UQ90 795 aa9.29□□□□□ -0.92
CTNNA1-201ENST00000302763 TATP17735 454 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-201ENST00000302763 CCT4P50991 539 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-201ENST00000302763 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
CTNNA1-201ENST00000302763 ZCRB1Q8TBF4 217 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-201ENST00000302763 GCC1Q96CN9 775 aa9.29□□□□□ -0.92
CTNNA1-201ENST00000302763 PRDM11Q9NQV5 511 aa9.29□□□□□ -0.92
CTNNA1-201ENST00000302763 NFKBIBQ15653 356 aa9.28□□□□□ -0.92
CTNNA1-201ENST00000302763 C16orf71Q8IYS4 520 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-201ENST00000302763 ZNF646O15015 1829 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-201ENST00000302763 RGPD3A6NKT7 1758 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-201ENST00000302763 RGPD4Q7Z3J3 1758 aa9.28□□□□□ -0.92
CTNNA1-201ENST00000302763 CASC1Q6TDU7 716 aa9.28□□□□□ -0.92
CTNNA1-201ENST00000302763 LAMA4Q16363 1823 aa9.28□□□□□ -0.92
CTNNA1-201ENST00000302763 USP42Q9H9J4 1324 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-201ENST00000302763 FRAT2O75474 233 aaPredicted RBP9.27□□□□□ -0.92
CTNNA1-201ENST00000302763 GSE1Q14687 1217 aa9.27□□□□□ -0.92
CTNNA1-201ENST00000302763 RPAP2Q8IXW5 612 aaPredicted RBP9.27□□□□□ -0.92
CTNNA1-201ENST00000302763 PIGBQ92521 554 aa9.27□□□□□ -0.92
CTNNA1-201ENST00000302763 ATG3Q9NT62 314 aa9.27□□□□□ -0.92
CTNNA1-201ENST00000302763 BRPF3Q9ULD4 1205 aa9.27□□□□□ -0.92
CTNNA1-201ENST00000302763 ATRNO75882 1429 aa9.27□□□□□ -0.92
CTNNA1-201ENST00000302763 PI4KAP2A4QPH2 592 aa9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 RFX5P48382 616 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 ATP8B2P98198 1209 aa9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 FNBP4Q8N3X1 1017 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 PI4KAP1Q8N8J0 262 aa9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 DBF4Q9UBU7 674 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 C1orf141Q5JVX7 400 aa9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 BARGINQ6ZT62 677 aa9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 RAPGEF4Q8WZA2 1011 aa9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 MYH7P12883 1935 aa9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 TNRC6CQ9HCJ0 1690 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-201ENST00000302763 BMP2KLQ5H9B9 411 aa9.26□□□□□ -0.93
CTNNA1-201ENST00000302763 IL17RAQ96F46 866 aa9.26□□□□□ -0.93
CTNNA1-201ENST00000302763 TAF1P21675 1872 aa9.26□□□□□ -0.93
CTNNA1-201ENST00000302763 LTBP1Q14766 1721 aa9.26□□□□□ -0.93
CTNNA1-201ENST00000302763 NRXN2Q9P2S2 1712 aa9.26□□□□□ -0.93
CTNNA1-201ENST00000302763 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
CTNNA1-201ENST00000302763 DNTTIP2Q5QJE6 756 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-201ENST00000302763 KSR2Q6VAB6 950 aa9.26□□□□□ -0.93
CTNNA1-201ENST00000302763 KCNJ4P48050 445 aa9.25□□□□□ -0.93
CTNNA1-201ENST00000302763 EPHA10Q5JZY3 1008 aa9.25□□□□□ -0.93
CTNNA1-201ENST00000302763 TBC1D32Q96NH3 1257 aa9.25□□□□□ -0.93
CTNNA1-201ENST00000302763 RABL6Q3YEC7 729 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-201ENST00000302763 NAP1L2Q9ULW6 460 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-201ENST00000302763 MARCH10Q8NA82 808 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-201ENST00000302763 DNAAF4Q8WXU2 420 aa9.25□□□□□ -0.93
CTNNA1-201ENST00000302763 ERBB4Q15303 1308 aa9.25□□□□□ -0.93
CTNNA1-201ENST00000302763 NEURL1BA8MQ27 555 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 STAP2Q9UGK3 403 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 THRAP3Q9Y2W1 955 aaKnown RBP9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 LRRFIP2Q9Y608 721 aaKnown RBP9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 DDIT3P35638 169 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 TEFQ10587 303 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 CWF19L2Q2TBE0 894 aaKnown RBP9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 TOM1L2Q6ZVM7 507 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 IL25Q9H293 177 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 MAP3K2Q9Y2U5 619 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 KIAA1551Q9HCM1 1747 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 PI4K2BQ8TCG2 481 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 HYPKQ9NX55 129 aa9.24□□□□□ -0.93
CTNNA1-201ENST00000302763 VSIG10Q8N0Z9 540 aa9.23□□□□□ -0.93
CTNNA1-201ENST00000302763 ASAP1Q9ULH1 1129 aa9.23□□□□□ -0.93
CTNNA1-201ENST00000302763 QSER1Q2KHR3 1735 aa9.23□□□□□ -0.93
CTNNA1-201ENST00000302763 ONECUT3O60422 494 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-201ENST00000302763 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-201ENST00000302763 FKBP5Q13451 457 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-201ENST00000302763 FOXO4P98177 505 aa9.23□□□□□ -0.93
CTNNA1-201ENST00000302763 JCADQ9P266 1359 aa9.23□□□□□ -0.93
CTNNA1-201ENST00000302763 SMARCA5O60264 1052 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 ALDH1L1O75891 902 aa9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 RBM25P49756 843 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 TTC22Q5TAA0 569 aa9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 SUCLG2Q96I99 432 aa9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 METTL22Q9BUU2 404 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 PTF1AQ7RTS3 328 aa9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 ZNF330Q9Y3S2 320 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 LRRC37AA6NMS7 1700 aa9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 GOLGA6L3A6NEY3 463 aa9.22□□□□□ -0.93
CTNNA1-201ENST00000302763 GNAI2P04899 355 aa9.21□□□□□ -0.93
CTNNA1-201ENST00000302763 CYP19A1P11511 503 aaPredicted RBP9.21□□□□□ -0.93
CTNNA1-201ENST00000302763 FMNL2Q96PY5 1086 aa9.21□□□□□ -0.93
CTNNA1-201ENST00000302763 CCDC9Q9Y3X0 531 aaKnown RBP9.21□□□□□ -0.93
CTNNA1-201ENST00000302763 UTRNP46939 3433 aa9.21□□□□□ -0.93
CTNNA1-201ENST00000302763 EIF2S2P20042 333 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 GCKRQ14397 625 aa9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 INTS5Q6P9B9 1019 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 TTLL7Q6ZT98 887 aa9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 LINS1Q8NG48 757 aa9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 XAGE3Q8WTP9 111 aa9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 ANTXR1Q9H6X2 564 aa9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 SASH1O94885 1247 aa9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 FGD1P98174 961 aa9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 STK31Q9BXU1 1019 aa9.21□□□□□ -0.94
CTNNA1-201ENST00000302763 H7C1W4 665 aa9.2□□□□□ -0.94
CTNNA1-201ENST00000302763 UNC5CLQ8IV45 518 aa9.2□□□□□ -0.94
CTNNA1-201ENST00000302763 ISCA1Q9BUE6 129 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms