RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 DDX54Q8TDD1 881 aaKnown RBP14.95□□□□□ -0.02
TPM3-202ENST00000302206 LNPKQ9C0E8 428 aa14.95□□□□□ -0.02
TPM3-202ENST00000302206 MAP3K2Q9Y2U5 619 aa14.94□□□□□ -0.02
TPM3-202ENST00000302206 ANXA1P04083 346 aa14.93□□□□□ -0.02
TPM3-202ENST00000302206 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
TPM3-202ENST00000302206 LRP10Q7Z4F1 713 aa14.93□□□□□ -0.02
TPM3-202ENST00000302206 LINS1Q8NG48 757 aa14.93□□□□□ -0.02
TPM3-202ENST00000302206 USP35Q9P2H5 1018 aa14.93□□□□□ -0.02
TPM3-202ENST00000302206 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
TPM3-202ENST00000302206 UTYO14607 1347 aa14.92□□□□□ -0.02
TPM3-202ENST00000302206 SPATA31A1Q5TZJ5 1347 aa14.92□□□□□ -0.02
TPM3-202ENST00000302206 EXOC5O00471 708 aa14.92□□□□□ -0.02
TPM3-202ENST00000302206 KCNQ2O43526 872 aa14.92□□□□□ -0.02
TPM3-202ENST00000302206 TMOD3Q9NYL9 352 aa14.92□□□□□ -0.02
TPM3-202ENST00000302206 USP16Q9Y5T5 823 aa14.92□□□□□ -0.02
TPM3-202ENST00000302206 LRRFIP2Q9Y608 721 aaKnown RBP14.92□□□□□ -0.02
TPM3-202ENST00000302206 POLA2Q14181 598 aa14.91□□□□□ -0.02
TPM3-202ENST00000302206 VSIG10Q8N0Z9 540 aa14.91□□□□□ -0.02
TPM3-202ENST00000302206 SSH3Q8TE77 659 aa14.91□□□□□ -0.02
TPM3-202ENST00000302206 IPO9Q96P70 1041 aaKnown RBP14.91□□□□□ -0.02
TPM3-202ENST00000302206 MTX1Q13505 466 aa14.9□□□□□ -0.02
TPM3-202ENST00000302206 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
TPM3-202ENST00000302206 XAGE3Q8WTP9 111 aa14.9□□□□□ -0.02
TPM3-202ENST00000302206 TEX13AQ9BXU3 409 aaPredicted RBP14.9□□□□□ -0.02
TPM3-202ENST00000302206 ITGB4P16144 1822 aa14.89□□□□□ -0.03
TPM3-202ENST00000302206 NEXNQ0ZGT2 675 aa14.89□□□□□ -0.03
TPM3-202ENST00000302206 COPS6Q7L5N1 327 aa14.89□□□□□ -0.03
TPM3-202ENST00000302206 RIC3Q7Z5B4 369 aa14.89□□□□□ -0.03
TPM3-202ENST00000302206 DDRGK1Q96HY6 314 aa14.89□□□□□ -0.03
TPM3-202ENST00000302206 METTL22Q9BUU2 404 aaPredicted RBP14.89□□□□□ -0.03
TPM3-202ENST00000302206 BCL9O00512 1426 aa14.89□□□□□ -0.03
TPM3-202ENST00000302206 EIF5BO60841 1220 aaKnown RBP14.88□□□□□ -0.03
TPM3-202ENST00000302206 RAB11FIP3O75154 756 aa14.88□□□□□ -0.03
TPM3-202ENST00000302206 ANKRD13DQ6ZTN6 518 aa14.88□□□□□ -0.03
TPM3-202ENST00000302206 PLEKHM2Q8IWE5 1019 aa14.88□□□□□ -0.03
TPM3-202ENST00000302206 COL15A1P39059 1388 aa14.87□□□□□ -0.03
TPM3-202ENST00000302206 PNMA6EA0A0J9YXQ4 647 aa14.87□□□□□ -0.03
TPM3-202ENST00000302206 GRM8O00222 908 aa14.87□□□□□ -0.03
TPM3-202ENST00000302206 NBPF7P0C2Y1 421 aaPredicted RBP14.87□□□□□ -0.03
TPM3-202ENST00000302206 MYL6BP14649 208 aa14.87□□□□□ -0.03
TPM3-202ENST00000302206 AIMP1Q12904 312 aaKnown RBP14.87□□□□□ -0.03
TPM3-202ENST00000302206 PLBD2Q8NHP8 589 aa14.87□□□□□ -0.03
TPM3-202ENST00000302206 PIGBQ92521 554 aa14.87□□□□□ -0.03
TPM3-202ENST00000302206 OSBPL3Q9H4L5 887 aa14.87□□□□□ -0.03
TPM3-202ENST00000302206 UPF2Q9HAU5 1272 aaKnown RBP14.87□□□□□ -0.03
TPM3-202ENST00000302206 C9orf78Q9NZ63 289 aaPredicted RBP14.87□□□□□ -0.03
TPM3-202ENST00000302206 ARFGEF2Q9Y6D5 1785 aa14.86□□□□□ -0.03
TPM3-202ENST00000302206 NEURL1BA8MQ27 555 aa14.86□□□□□ -0.03
TPM3-202ENST00000302206 IGKV5-2P06315 115 aa14.86□□□□□ -0.03
TPM3-202ENST00000302206 HSP90AB4PQ58FF6 505 aa14.86□□□□□ -0.03
TPM3-202ENST00000302206 PPP1R42Q7Z4L9 355 aa14.86□□□□□ -0.03
TPM3-202ENST00000302206 NPM2Q86SE8 214 aaKnown RBP14.86□□□□□ -0.03
TPM3-202ENST00000302206 ZNF784Q8NCA9 323 aaPredicted RBP14.86□□□□□ -0.03
TPM3-202ENST00000302206 LRRCC1Q9C099 1032 aa14.86□□□□□ -0.03
TPM3-202ENST00000302206 NBPF26B4DH59 902 aa14.85□□□□□ -0.03
TPM3-202ENST00000302206 DDB1Q16531 1140 aa14.85□□□□□ -0.03
TPM3-202ENST00000302206 TTC22Q5TAA0 569 aa14.85□□□□□ -0.03
TPM3-202ENST00000302206 IFFO2Q5TF58 517 aa14.85□□□□□ -0.03
TPM3-202ENST00000302206 NBPF10Q6P3W6 841 aaKnown RBP14.85□□□□□ -0.03
TPM3-202ENST00000302206 NBPF15Q8N660 670 aa14.85□□□□□ -0.03
TPM3-202ENST00000302206 ATG3Q9NT62 314 aa14.85□□□□□ -0.03
TPM3-202ENST00000302206 GCKRQ14397 625 aa14.84□□□□□ -0.03
TPM3-202ENST00000302206 CWF19L2Q2TBE0 894 aaKnown RBP14.84□□□□□ -0.03
TPM3-202ENST00000302206 NOP58Q9Y2X3 529 aaKnown RBP14.84□□□□□ -0.03
TPM3-202ENST00000302206 CHD4Q14839 1912 aa14.84□□□□□ -0.03
TPM3-202ENST00000302206 SRGAP3O43295 1099 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 PTCD1O75127 700 aaKnown RBP14.83□□□□□ -0.04
TPM3-202ENST00000302206 SEC24BO95487 1268 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 MYD88Q99836 296 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 ASAP1Q9ULH1 1129 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 EXOC6BQ9Y2D4 811 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 AOX1Q06278 1338 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 SALL3Q9BXA9 1300 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 DOT1LQ8TEK3 1739 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.04
TPM3-202ENST00000302206 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.04
TPM3-202ENST00000302206 CICQ96RK0 1608 aaPredicted RBP14.82□□□□□ -0.04
TPM3-202ENST00000302206 STARD3NLO95772 234 aa14.82□□□□□ -0.04
TPM3-202ENST00000302206 KIF1BPQ96EK5 621 aa14.82□□□□□ -0.04
TPM3-202ENST00000302206 TBC1D32Q96NH3 1257 aa14.82□□□□□ -0.04
TPM3-202ENST00000302206 STAP2Q9UGK3 403 aa14.82□□□□□ -0.04
TPM3-202ENST00000302206 AFDNP55196 1824 aaKnown RBP14.81□□□□□ -0.04
TPM3-202ENST00000302206 SMARCA5O60264 1052 aaPredicted RBP14.81□□□□□ -0.04
TPM3-202ENST00000302206 CDC45O75419 566 aa14.81□□□□□ -0.04
TPM3-202ENST00000302206 A1BGP04217 495 aa14.81□□□□□ -0.04
TPM3-202ENST00000302206 C16orf71Q8IYS4 520 aaPredicted RBP14.81□□□□□ -0.04
TPM3-202ENST00000302206 SUCLG2Q96I99 432 aa14.81□□□□□ -0.04
TPM3-202ENST00000302206 UTRNP46939 3433 aa14.81□□□□□ -0.04
TPM3-202ENST00000302206 CASZ1Q86V15 1759 aa14.8□□□□□ -0.04
TPM3-202ENST00000302206 SURF6O75683 361 aaKnown RBP14.8□□□□□ -0.04
TPM3-202ENST00000302206 GSPT1P15170 499 aaKnown RBP14.8□□□□□ -0.04
TPM3-202ENST00000302206 PDE1AP54750 535 aa14.8□□□□□ -0.04
TPM3-202ENST00000302206 C1QTNF8P60827 252 aa14.8□□□□□ -0.04
TPM3-202ENST00000302206 ERC1Q8IUD2 1116 aa14.8□□□□□ -0.04
TPM3-202ENST00000302206 TJP1Q07157 1748 aa14.79□□□□□ -0.04
TPM3-202ENST00000302206 DNAJC10Q8IXB1 793 aa14.79□□□□□ -0.04
TPM3-202ENST00000302206 MARCH10Q8NA82 808 aaPredicted RBP14.79□□□□□ -0.04
TPM3-202ENST00000302206 OTUD7AQ8TE49 926 aaPredicted RBP14.79□□□□□ -0.04
TPM3-202ENST00000302206 KAZALD1Q96I82 304 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms