RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 UPF3BQ9BZI7 483 aaKnown RBP17.8■□□□□ 0.44
SMG8-201ENST00000300917 NCOA3Q9Y6Q9 1424 aa17.8■□□□□ 0.44
SMG8-201ENST00000300917 GCKRQ14397 625 aa17.8■□□□□ 0.44
SMG8-201ENST00000300917 NEK4P51957 841 aa17.8■□□□□ 0.44
SMG8-201ENST00000300917 FOXD4L5Q5VV16 416 aaPredicted RBP17.8■□□□□ 0.44
SMG8-201ENST00000300917 FOXD4L4Q8WXT5 416 aaPredicted RBP17.8■□□□□ 0.44
SMG8-201ENST00000300917 G3BP1Q13283 466 aaKnown RBP eCLIP17.79■□□□□ 0.442e-6■□□□□ 11.3
SMG8-201ENST00000300917 RABEP1Q15276 862 aa17.79■□□□□ 0.44
SMG8-201ENST00000300917 PI4K2BQ8TCG2 481 aa17.79■□□□□ 0.44
SMG8-201ENST00000300917 TLR7Q9NYK1 1049 aaKnown RBP17.79■□□□□ 0.44
SMG8-201ENST00000300917 CPDO75976 1380 aa17.79■□□□□ 0.44
SMG8-201ENST00000300917 A0A087WZG4 1122 aa17.79■□□□□ 0.44
SMG8-201ENST00000300917 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
SMG8-201ENST00000300917 NBPF14Q5TI25 921 aa17.79■□□□□ 0.44
SMG8-201ENST00000300917 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
SMG8-201ENST00000300917 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
SMG8-201ENST00000300917 PCDH11XQ9BZA7 1347 aa17.79■□□□□ 0.44
SMG8-201ENST00000300917 PCDH11YQ9BZA8 1340 aa17.79■□□□□ 0.44
SMG8-201ENST00000300917 METTL22Q9BUU2 404 aaPredicted RBP17.78■□□□□ 0.44
SMG8-201ENST00000300917 STAP2Q9UGK3 403 aa17.78■□□□□ 0.44
SMG8-201ENST00000300917 MCM4P33991 863 aa17.78■□□□□ 0.44
SMG8-201ENST00000300917 LARP6Q9BRS8 491 aaKnown RBP17.78■□□□□ 0.44
SMG8-201ENST00000300917 DTNBO60941 627 aa17.78■□□□□ 0.44
SMG8-201ENST00000300917 ADAMTS2O95450 1211 aa17.78■□□□□ 0.44
SMG8-201ENST00000300917 NDUFB9Q9Y6M9 179 aa17.78■□□□□ 0.44
SMG8-201ENST00000300917 CACNA1FO60840 1977 aa17.77■□□□□ 0.44
SMG8-201ENST00000300917 SASH1O94885 1247 aa17.77■□□□□ 0.43
SMG8-201ENST00000300917 TNPO1Q92973 898 aaKnown RBP17.77■□□□□ 0.43
SMG8-201ENST00000300917 CCDC85AQ96PX6 553 aaPredicted RBP17.77■□□□□ 0.43
SMG8-201ENST00000300917 COL18A1P39060 1754 aa17.77■□□□□ 0.43
SMG8-201ENST00000300917 OVOS2A0A0G2JMS6 1433 aa17.77■□□□□ 0.43
SMG8-201ENST00000300917 SSFA2P28290 1259 aa17.76■□□□□ 0.43
SMG8-201ENST00000300917 HSP90AB4PQ58FF6 505 aa17.76■□□□□ 0.43
SMG8-201ENST00000300917 ZGPATQ8N5A5 531 aaKnown RBP17.76■□□□□ 0.43
SMG8-201ENST00000300917 EAF2Q96CJ1 260 aaPredicted RBP17.76■□□□□ 0.43
SMG8-201ENST00000300917 STRCQ7RTU9 1775 aa17.76■□□□□ 0.43
SMG8-201ENST00000300917 XIRP1Q702N8 1843 aaKnown RBP17.76■□□□□ 0.43
SMG8-201ENST00000300917 BOLA2Q9H3K6 86 aa17.76■□□□□ 0.43
SMG8-201ENST00000300917 ASAP1Q9ULH1 1129 aa17.76■□□□□ 0.43
SMG8-201ENST00000300917 CARD10Q9BWT7 1032 aa17.75■□□□□ 0.43
SMG8-201ENST00000300917 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
SMG8-201ENST00000300917 PKP1Q13835 747 aa17.75■□□□□ 0.43
SMG8-201ENST00000300917 LRP10Q7Z4F1 713 aa17.75■□□□□ 0.43
SMG8-201ENST00000300917 ST18O60284 1047 aa17.74■□□□□ 0.43
SMG8-201ENST00000300917 EDC3Q96F86 508 aaKnown RBP17.74■□□□□ 0.43
SMG8-201ENST00000300917 CNTROBQ8N137 903 aa17.74■□□□□ 0.43
SMG8-201ENST00000300917 TMOD3Q9NYL9 352 aa17.74■□□□□ 0.43
SMG8-201ENST00000300917 NUTM2BA6NNL0 878 aaPredicted RBP17.73■□□□□ 0.43
SMG8-201ENST00000300917 NUTM2EB1AL46 878 aaPredicted RBP17.73■□□□□ 0.43
SMG8-201ENST00000300917 NUTM2AQ8IVF1 878 aaPredicted RBP17.73■□□□□ 0.43
SMG8-201ENST00000300917 CHAMP1Q96JM3 812 aa17.73■□□□□ 0.43
SMG8-201ENST00000300917 MTX1Q13505 466 aa17.73■□□□□ 0.43
SMG8-201ENST00000300917 ECHDC1Q9NTX5 307 aa17.73■□□□□ 0.43
SMG8-201ENST00000300917 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
SMG8-201ENST00000300917 DIAPH3Q9NSV4 1193 aa17.73■□□□□ 0.43
SMG8-201ENST00000300917 LMBR1LQ6UX01 489 aa17.72■□□□□ 0.43
SMG8-201ENST00000300917 CPA1P15085 419 aa17.72■□□□□ 0.43
SMG8-201ENST00000300917 C5P01031 1676 aa17.72■□□□□ 0.43
SMG8-201ENST00000300917 MCCP23508 829 aa17.71■□□□□ 0.43
SMG8-201ENST00000300917 GLRX3O76003 335 aaKnown RBP17.71■□□□□ 0.43
SMG8-201ENST00000300917 PIP4K2BP78356 416 aa17.71■□□□□ 0.43
SMG8-201ENST00000300917 FOXD4L6Q3SYB3 417 aaPredicted RBP17.71■□□□□ 0.43
SMG8-201ENST00000300917 FOXD4L3Q6VB84 417 aaPredicted RBP17.71■□□□□ 0.43
SMG8-201ENST00000300917 DNAJC10Q8IXB1 793 aa17.71■□□□□ 0.43
SMG8-201ENST00000300917 HDAC5Q9UQL6 1122 aa17.7■□□□□ 0.42
SMG8-201ENST00000300917 DDIT3P35638 169 aa17.7■□□□□ 0.42
SMG8-201ENST00000300917 TFCP2Q12800 502 aa17.7■□□□□ 0.42
SMG8-201ENST00000300917 PLBD2Q8NHP8 589 aa17.7■□□□□ 0.42
SMG8-201ENST00000300917 PIGBQ92521 554 aa17.7■□□□□ 0.42
SMG8-201ENST00000300917 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
SMG8-201ENST00000300917 SCN11AQ9UI33 1791 aa17.7■□□□□ 0.42
SMG8-201ENST00000300917 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
SMG8-201ENST00000300917 TRAK2O60296 914 aa17.69■□□□□ 0.42
SMG8-201ENST00000300917 CHGBP05060 677 aa17.69■□□□□ 0.42
SMG8-201ENST00000300917 KIAA1211Q6ZU35 1233 aa17.69■□□□□ 0.42
SMG8-201ENST00000300917 ZNF594Q96JF6 807 aaPredicted RBP17.69■□□□□ 0.42
SMG8-201ENST00000300917 ERC1Q8IUD2 1116 aa17.69■□□□□ 0.42
SMG8-201ENST00000300917 GPATCH3Q96I76 525 aa17.69■□□□□ 0.42
SMG8-201ENST00000300917 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
SMG8-201ENST00000300917 RTN4Q9NQC3 1192 aaKnown RBP17.69■□□□□ 0.42
SMG8-201ENST00000300917 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
SMG8-201ENST00000300917 SGSM2O43147 1006 aa17.68■□□□□ 0.42
SMG8-201ENST00000300917 GPTP24298 496 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 PTH1RQ03431 593 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 RASEFQ8IZ41 740 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 NEUROD6Q96NK8 337 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 DNAJC2Q99543 621 aaKnown RBP17.67■□□□□ 0.42
SMG8-201ENST00000300917 UTYO14607 1347 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 PTPN12Q05209 780 aaKnown RBP17.67■□□□□ 0.42
SMG8-201ENST00000300917 RAB3GAP1Q15042 981 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 TPRNQ4KMQ1 711 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 FSD1Q9BTV5 496 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 SYNE4Q8N205 404 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 TMX3Q96JJ7 454 aa17.67■□□□□ 0.42
SMG8-201ENST00000300917 KCNJ4P48050 445 aa17.66■□□□□ 0.42
SMG8-201ENST00000300917 AOX1Q06278 1338 aa17.66■□□□□ 0.42
SMG8-201ENST00000300917 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
SMG8-201ENST00000300917 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
SMG8-201ENST00000300917 CWC25Q9NXE8 425 aaPredicted RBP17.66■□□□□ 0.42
SMG8-201ENST00000300917 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms