RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TRMT1Q9NXH9 659 aaKnown RBP15.46■□□□□ 0.07
TVP23A-201ENST00000299866 USP27XA6NNY8 438 aa15.45■□□□□ 0.06
TVP23A-201ENST00000299866 ME3Q16798 604 aa15.45■□□□□ 0.06
TVP23A-201ENST00000299866 CNTROBQ8N137 903 aa15.45■□□□□ 0.06
TVP23A-201ENST00000299866 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
TVP23A-201ENST00000299866 ZNF397Q8NF99 534 aaPredicted RBP15.45■□□□□ 0.06
TVP23A-201ENST00000299866 UBTFL1P0CB47 393 aaPredicted RBP15.44■□□□□ 0.06
TVP23A-201ENST00000299866 PTH1RQ03431 593 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 SLC52A1Q9NWF4 448 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 CYP46A1Q9Y6A2 500 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 ST3GAL1Q11201 340 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 ELF2Q15723 593 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 PI4K2BQ8TCG2 481 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 CCDC66A2RUB6 948 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 IRX5P78411 483 aaPredicted RBP15.44■□□□□ 0.06
TVP23A-201ENST00000299866 PTPN14Q15678 1187 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 BICD2Q8TD16 824 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 SPATA32Q96LK8 384 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 TCEANC2Q96MN5 208 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
TVP23A-201ENST00000299866 HSP90AB2PQ58FF8 381 aa15.43■□□□□ 0.06
TVP23A-201ENST00000299866 PPP1R42Q7Z4L9 355 aa15.43■□□□□ 0.06
TVP23A-201ENST00000299866 RHPN1Q8TCX5 695 aa15.43■□□□□ 0.06
TVP23A-201ENST00000299866 NAP1L2Q9ULW6 460 aaPredicted RBP15.43■□□□□ 0.06
TVP23A-201ENST00000299866 EPB41L2O43491 1005 aaKnown RBP15.42■□□□□ 0.06
TVP23A-201ENST00000299866 FBXO38Q6PIJ6 1188 aa15.42■□□□□ 0.06
TVP23A-201ENST00000299866 FILIP1Q7Z7B0 1213 aa15.42■□□□□ 0.06
TVP23A-201ENST00000299866 ZSCAN31Q96LW9 406 aaPredicted RBP15.42■□□□□ 0.06
TVP23A-201ENST00000299866 NR1I2O75469 434 aa15.42■□□□□ 0.06
TVP23A-201ENST00000299866 RAPGEF3O95398 923 aa15.42■□□□□ 0.06
TVP23A-201ENST00000299866 VPS53Q5VIR6 699 aa15.42■□□□□ 0.06
TVP23A-201ENST00000299866 USP44Q9H0E7 712 aa15.42■□□□□ 0.06
TVP23A-201ENST00000299866 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
TVP23A-201ENST00000299866 AATKQ6ZMQ8 1374 aa15.42■□□□□ 0.06
TVP23A-201ENST00000299866 SH2B1Q9NRF2 756 aaPredicted RBP15.42■□□□□ 0.06
TVP23A-201ENST00000299866 AOX1Q06278 1338 aa15.42■□□□□ 0.06
TVP23A-201ENST00000299866 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
TVP23A-201ENST00000299866 GOLGA6L19H0YKK7 550 aa15.41■□□□□ 0.06
TVP23A-201ENST00000299866 FBXO31Q5XUX0 539 aaPredicted RBP15.41■□□□□ 0.06
TVP23A-201ENST00000299866 TDRD7Q8NHU6 1098 aaKnown RBP15.41■□□□□ 0.06
TVP23A-201ENST00000299866 SIGLEC1Q9BZZ2 1709 aa15.41■□□□□ 0.06
TVP23A-201ENST00000299866 TPCN1Q9ULQ1 816 aa15.41■□□□□ 0.06
TVP23A-201ENST00000299866 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.41■□□□□ 0.06
TVP23A-201ENST00000299866 LRRC8AQ8IWT6 810 aa15.41■□□□□ 0.06
TVP23A-201ENST00000299866 NUDT16Q96DE0 195 aaKnown RBP15.41■□□□□ 0.06
TVP23A-201ENST00000299866 TIGD1Q96MW7 591 aa15.41■□□□□ 0.06
TVP23A-201ENST00000299866 SKILP12757 684 aa15.41■□□□□ 0.06
TVP23A-201ENST00000299866 STK3Q13188 491 aa15.41■□□□□ 0.06
TVP23A-201ENST00000299866 OS9Q13438 667 aaPredicted RBP15.41■□□□□ 0.06
TVP23A-201ENST00000299866 SRGAP3O43295 1099 aa15.4■□□□□ 0.06
TVP23A-201ENST00000299866 COL9A3Q14050 684 aaPredicted RBP15.4■□□□□ 0.06
TVP23A-201ENST00000299866 MTHFSDQ2M296 383 aaKnown RBP15.4■□□□□ 0.06
TVP23A-201ENST00000299866 CLSTN2Q9H4D0 955 aa15.4■□□□□ 0.06
TVP23A-201ENST00000299866 FRMPD1Q5SYB0 1578 aa15.4■□□□□ 0.06
TVP23A-201ENST00000299866 ATP7BP35670 1465 aa15.4■□□□□ 0.06
TVP23A-201ENST00000299866 CRB1P82279 1406 aa15.4■□□□□ 0.06
TVP23A-201ENST00000299866 WASLO00401 505 aaPredicted RBP15.4■□□□□ 0.06
TVP23A-201ENST00000299866 DDX19AQ9NUU7 478 aaKnown RBP15.4■□□□□ 0.06
TVP23A-201ENST00000299866 USP16Q9Y5T5 823 aa15.4■□□□□ 0.06
TVP23A-201ENST00000299866 HECW2Q9P2P5 1572 aa15.4■□□□□ 0.06
TVP23A-201ENST00000299866 RAB11FIP3O75154 756 aa15.39■□□□□ 0.05
TVP23A-201ENST00000299866 RBM6P78332 1123 aaKnown RBP15.39■□□□□ 0.05
TVP23A-201ENST00000299866 CCDC30Q5VVM6 783 aa15.39■□□□□ 0.05
TVP23A-201ENST00000299866 SYTL4Q96C24 671 aaPredicted RBP15.39■□□□□ 0.05
TVP23A-201ENST00000299866 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
TVP23A-201ENST00000299866 A0A087WWV3 80 aa15.39■□□□□ 0.05
TVP23A-201ENST00000299866 FBXW7Q969H0 707 aa15.39■□□□□ 0.05
TVP23A-201ENST00000299866 ZSWIM6Q9HCJ5 1215 aa15.39■□□□□ 0.05
TVP23A-201ENST00000299866 CEBPZQ03701 1054 aaKnown RBP15.39■□□□□ 0.05
TVP23A-201ENST00000299866 LARP1Q6PKG0 1096 aaKnown RBP15.39■□□□□ 0.05
TVP23A-201ENST00000299866 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
TVP23A-201ENST00000299866 SSH3Q8TE77 659 aa15.39■□□□□ 0.05
TVP23A-201ENST00000299866 LEO1Q8WVC0 666 aaPredicted RBP15.39■□□□□ 0.05
TVP23A-201ENST00000299866 SCAND2PQ9GZW5 306 aaPredicted RBP15.39■□□□□ 0.05
TVP23A-201ENST00000299866 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
TVP23A-201ENST00000299866 PLCD3Q8N3E9 789 aa15.38■□□□□ 0.05
TVP23A-201ENST00000299866 CCDC171Q6TFL3 1326 aa15.38■□□□□ 0.05
TVP23A-201ENST00000299866 NUTM2FA1L443 756 aa15.38■□□□□ 0.05
TVP23A-201ENST00000299866 ZKSCAN1P17029 563 aaPredicted RBP15.38■□□□□ 0.05
TVP23A-201ENST00000299866 KIF1BPQ96EK5 621 aa15.38■□□□□ 0.05
TVP23A-201ENST00000299866 CCDC69A6NI79 296 aa15.38■□□□□ 0.05
TVP23A-201ENST00000299866 TXNDC2Q86VQ3 553 aa15.38■□□□□ 0.05
TVP23A-201ENST00000299866 RUFY2Q8WXA3 655 aa15.38■□□□□ 0.05
TVP23A-201ENST00000299866 GTF3C6Q969F1 213 aa15.38■□□□□ 0.05
TVP23A-201ENST00000299866 NPHP3Q7Z494 1330 aa15.37■□□□□ 0.05
TVP23A-201ENST00000299866 CPS1P31327 1500 aa15.37■□□□□ 0.05
TVP23A-201ENST00000299866 ERO1AQ96HE7 468 aa15.37■□□□□ 0.05
TVP23A-201ENST00000299866 ELP1O95163 1332 aa15.37■□□□□ 0.05
TVP23A-201ENST00000299866 C11orf57Q6ZUT1 292 aaPredicted RBP15.37■□□□□ 0.05
TVP23A-201ENST00000299866 PGBD1Q96JS3 809 aa15.37■□□□□ 0.05
TVP23A-201ENST00000299866 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
TVP23A-201ENST00000299866 SLU7O95391 586 aaKnown RBP15.36■□□□□ 0.05
TVP23A-201ENST00000299866 PDCP20941 246 aa15.36■□□□□ 0.05
TVP23A-201ENST00000299866 DDX11Q96FC9 970 aa15.36■□□□□ 0.05
TVP23A-201ENST00000299866 TTC21AQ8NDW8 1320 aa15.36■□□□□ 0.05
TVP23A-201ENST00000299866 BECN2A8MW95 431 aa15.36■□□□□ 0.05
TVP23A-201ENST00000299866 RBM8AQ9Y5S9 174 aaKnown RBP15.36■□□□□ 0.05
TVP23A-201ENST00000299866 NOL10Q9BSC4 688 aaKnown RBP15.36■□□□□ 0.05
TVP23A-201ENST00000299866 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
TVP23A-201ENST00000299866 CALCOCO1Q9P1Z2 691 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms