RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 SLC12A7Q9Y666 1083 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 TNNT3P45378 269 aaPredicted RBP8.35□□□□□ -1.07
RAG1-201ENST00000299440 CATIPQ7Z7H3 387 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 ZGPATQ8N5A5 531 aaKnown RBP8.35□□□□□ -1.07
RAG1-201ENST00000299440 NLRP5P59047 1200 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 CCDC181Q5TID7 509 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 TMEM57Q8N5G2 664 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 DEF6Q9H4E7 631 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 SP4Q02446 784 aa8.34□□□□□ -1.07
RAG1-201ENST00000299440 TTF1Q15361 905 aaPredicted RBP8.34□□□□□ -1.07
RAG1-201ENST00000299440 HAND2P61296 217 aa8.34□□□□□ -1.07
RAG1-201ENST00000299440 DPP8Q6V1X1 898 aaPredicted RBP8.34□□□□□ -1.07
RAG1-201ENST00000299440 PLCH2O75038 1416 aa8.34□□□□□ -1.07
RAG1-201ENST00000299440 CCDC194A0A1B0GVG4 234 aa8.34□□□□□ -1.07
RAG1-201ENST00000299440 IRS4O14654 1257 aaPredicted RBP8.34□□□□□ -1.07
RAG1-201ENST00000299440 NUCB2P80303 420 aa8.34□□□□□ -1.07
RAG1-201ENST00000299440 IVNS1ABPQ9Y6Y0 642 aa8.34□□□□□ -1.07
RAG1-201ENST00000299440 AKAP4Q5JQC9 854 aa8.34□□□□□ -1.07
RAG1-201ENST00000299440 NAA16Q6N069 864 aaPredicted RBP8.34□□□□□ -1.07
RAG1-201ENST00000299440 CUL7Q14999 1698 aa8.34□□□□□ -1.07
RAG1-201ENST00000299440 MYCP01106 439 aaPredicted RBP8.34□□□□□ -1.07
RAG1-201ENST00000299440 IPO9Q96P70 1041 aaKnown RBP8.34□□□□□ -1.07
RAG1-201ENST00000299440 CEP57L1Q8IYX8 460 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 BAG4O95429 457 aaKnown RBP8.33□□□□□ -1.08
RAG1-201ENST00000299440 NOM1Q5C9Z4 860 aaKnown RBP8.33□□□□□ -1.08
RAG1-201ENST00000299440 BICD1Q96G01 975 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 TMOD4Q9NZQ9 345 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 GLRX3O76003 335 aaKnown RBP8.33□□□□□ -1.08
RAG1-201ENST00000299440 KRT32Q14532 448 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 TMEM266Q2M3C6 531 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 PRPF40BQ6NWY9 871 aaKnown RBP8.33□□□□□ -1.08
RAG1-201ENST00000299440 RAB11FIP4Q86YS3 637 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 H7C1D1 291 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
RAG1-201ENST00000299440 ATP2B3Q16720 1220 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 CCDC150Q8NCX0 1101 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 NCOA1Q15788 1441 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 PPIP5K2O43314 1243 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 AAMPQ13685 434 aa8.33□□□□□ -1.08
RAG1-201ENST00000299440 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
RAG1-201ENST00000299440 RPAP2Q8IXW5 612 aaPredicted RBP8.33□□□□□ -1.08
RAG1-201ENST00000299440 UQCRFS1P1P0C7P4 283 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 CASTP20810 708 aaKnown RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 KIF22Q14807 665 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 ZYXQ15942 572 aaKnown RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 AEBP1Q8IUX7 1158 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 EIF4G3O43432 1585 aaKnown RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 GOLGA8AA7E2F4 631 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 GOLGA8BA8MQT2 603 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 RAB3GAP1Q15042 981 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 TAF12Q16514 161 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 SKOR2Q2VWA4 1001 aaPredicted RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 ZNHIT6Q9NWK9 470 aaKnown RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 TIAM1Q13009 1591 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 CCDC196A0A1B0GTZ2 297 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 POTEJP0CG39 1038 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 MX1P20591 662 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 DCAF5Q96JK2 942 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 GPHNQ9NQX3 736 aaPredicted RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 B4DLN1 442 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 MRPL12P52815 198 aaKnown RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 LMBR1LQ6UX01 489 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 SMCR8Q8TEV9 937 aaPredicted RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 SMARCE1Q969G3 411 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 ABT1Q9ULW3 272 aaKnown RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 TBX22Q9Y458 520 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 CT47B1P0C2W7 299 aaPredicted RBP8.32□□□□□ -1.08
RAG1-201ENST00000299440 MFSD6Q6ZSS7 791 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 RUFY1Q96T51 708 aa8.32□□□□□ -1.08
RAG1-201ENST00000299440 PCF11O94913 1555 aaKnown RBP8.31□□□□□ -1.08
RAG1-201ENST00000299440 CHD1LQ86WJ1 897 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 RAB34Q9BZG1 259 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 SLC4A4Q9Y6R1 1079 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 NEFHP12036 1026 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 HCLS1P14317 486 aaPredicted RBP8.31□□□□□ -1.08
RAG1-201ENST00000299440 GUCY1B3Q02153 619 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 PSMD1Q99460 953 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 LDHBP07195 334 aaKnown RBP8.31□□□□□ -1.08
RAG1-201ENST00000299440 KIF5BP33176 963 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 WDR62O43379 1518 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 ATP10BO94823 1461 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 SERPINC1P01008 464 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 KRT27Q7Z3Y8 459 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 ANKRD2Q9GZV1 360 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 GGA1Q9UJY5 639 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 TRAPPC8Q9Y2L5 1435 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 TMEM67Q5HYA8 995 aa8.31□□□□□ -1.08
RAG1-201ENST00000299440 ANKRD62A6NC57 917 aa8.3□□□□□ -1.08
RAG1-201ENST00000299440 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
RAG1-201ENST00000299440 SMARCC2Q8TAQ2 1214 aa8.3□□□□□ -1.08
RAG1-201ENST00000299440 PIK3R4Q99570 1358 aa8.3□□□□□ -1.08
RAG1-201ENST00000299440 PUF60Q9UHX1 559 aaKnown RBP8.3□□□□□ -1.08
RAG1-201ENST00000299440 SSRP1Q08945 709 aaKnown RBP8.3□□□□□ -1.08
RAG1-201ENST00000299440 ZNF354CQ86Y25 554 aa8.3□□□□□ -1.08
RAG1-201ENST00000299440 C2CD5Q86YS7 1000 aa8.3□□□□□ -1.08
RAG1-201ENST00000299440 MIGA1Q8NAN2 632 aa8.3□□□□□ -1.08
RAG1-201ENST00000299440 RNF214Q8ND24 703 aa8.3□□□□□ -1.08
RAG1-201ENST00000299440 SUPT20HQ8NEM7 779 aa8.3□□□□□ -1.08
RAG1-201ENST00000299440 SAP30BPQ9UHR5 308 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms