RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 BOLA2Q9H3K6 86 aa12.24□□□□□ -0.45
FOXN4-201ENST00000299162 RGPD2P0DJD1 1756 aa12.24□□□□□ -0.45
FOXN4-201ENST00000299162 DDX11L8A8MPP1 907 aa12.24□□□□□ -0.45
FOXN4-201ENST00000299162 MCCP23508 829 aa12.24□□□□□ -0.45
FOXN4-201ENST00000299162 C1orf167Q5SNV9 1468 aa12.23□□□□□ -0.45
FOXN4-201ENST00000299162 UBE3BQ7Z3V4 1068 aa12.23□□□□□ -0.45
FOXN4-201ENST00000299162 EDC3Q96F86 508 aaKnown RBP12.23□□□□□ -0.45
FOXN4-201ENST00000299162 LTN1O94822 1766 aa12.23□□□□□ -0.45
FOXN4-201ENST00000299162 NPHP3Q7Z494 1330 aa12.23□□□□□ -0.45
FOXN4-201ENST00000299162 FSD2A1L4K1 749 aa12.23□□□□□ -0.45
FOXN4-201ENST00000299162 CYP27B1O15528 508 aa12.23□□□□□ -0.45
FOXN4-201ENST00000299162 NEXNQ0ZGT2 675 aa12.23□□□□□ -0.45
FOXN4-201ENST00000299162 RAB3GAP1Q15042 981 aa12.23□□□□□ -0.45
FOXN4-201ENST00000299162 DIAPH3Q9NSV4 1193 aa12.23□□□□□ -0.45
FOXN4-201ENST00000299162 GOLGA6L22H0YM25 854 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
FOXN4-201ENST00000299162 G3BP1Q13283 466 aaKnown RBP eCLIP12.22□□□□□ -0.45
FOXN4-201ENST00000299162 DHX37Q8IY37 1157 aaKnown RBP12.22□□□□□ -0.45
FOXN4-201ENST00000299162 TLR7Q9NYK1 1049 aaKnown RBP12.22□□□□□ -0.45
FOXN4-201ENST00000299162 VGLL3A8MV65 326 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 GRM8O00222 908 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 PRPF40AO75400 957 aaKnown RBP12.22□□□□□ -0.45
FOXN4-201ENST00000299162 PHKG2P15735 406 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 GDPD2Q9HCC8 539 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 EVA1CP58658 441 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 IFNL2Q8IZJ0 200 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 TMX3Q96JJ7 454 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 TCEANC2Q96MN5 208 aa12.22□□□□□ -0.45
FOXN4-201ENST00000299162 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
FOXN4-201ENST00000299162 BAG4O95429 457 aaKnown RBP12.21□□□□□ -0.45
FOXN4-201ENST00000299162 NASPP49321 788 aaPredicted RBP12.21□□□□□ -0.45
FOXN4-201ENST00000299162 EPHA10Q5JZY3 1008 aa12.21□□□□□ -0.45
FOXN4-201ENST00000299162 CADPS2Q86UW7 1296 aa12.21□□□□□ -0.45
FOXN4-201ENST00000299162 IPO4Q8TEX9 1081 aaKnown RBP12.21□□□□□ -0.45
FOXN4-201ENST00000299162 KCNA4P22459 653 aa12.21□□□□□ -0.46
FOXN4-201ENST00000299162 CAVIN1Q6NZI2 390 aaKnown RBP12.21□□□□□ -0.46
FOXN4-201ENST00000299162 CNTROBQ8N137 903 aa12.21□□□□□ -0.46
FOXN4-201ENST00000299162 SYTL4Q96C24 671 aaPredicted RBP12.21□□□□□ -0.46
FOXN4-201ENST00000299162 DDX21Q9NR30 783 aaKnown RBP eCLIP12.21□□□□□ -0.46
FOXN4-201ENST00000299162 HYPKQ9NX55 129 aa12.21□□□□□ -0.46
FOXN4-201ENST00000299162 NFAT5O94916 1531 aa12.2□□□□□ -0.46
FOXN4-201ENST00000299162 CHGBP05060 677 aa12.2□□□□□ -0.46
FOXN4-201ENST00000299162 IGKV5-2P06315 115 aa12.2□□□□□ -0.46
FOXN4-201ENST00000299162 OSBPL3Q9H4L5 887 aa12.2□□□□□ -0.46
FOXN4-201ENST00000299162 TAOK2Q9UL54 1235 aa12.2□□□□□ -0.46
FOXN4-201ENST00000299162 PI4K2BQ8TCG2 481 aa12.2□□□□□ -0.46
FOXN4-201ENST00000299162 BABAM1Q9NWV8 329 aa12.2□□□□□ -0.46
FOXN4-201ENST00000299162 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
FOXN4-201ENST00000299162 A1BGP04217 495 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 CHD2O14647 1828 aaKnown RBP12.19□□□□□ -0.46
FOXN4-201ENST00000299162 PRPF40BQ6NWY9 871 aaKnown RBP12.19□□□□□ -0.46
FOXN4-201ENST00000299162 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 ZNF830Q96NB3 372 aaPredicted RBP12.19□□□□□ -0.46
FOXN4-201ENST00000299162 DNAJC2Q99543 621 aaKnown RBP12.19□□□□□ -0.46
FOXN4-201ENST00000299162 A0A087WZG4 1122 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 RAB11FIP3O75154 756 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 DDIT3P35638 169 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 POLA2Q14181 598 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 DNTTIP2Q5QJE6 756 aaKnown RBP12.19□□□□□ -0.46
FOXN4-201ENST00000299162 RASEFQ8IZ41 740 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 EAF2Q96CJ1 260 aaPredicted RBP12.19□□□□□ -0.46
FOXN4-201ENST00000299162 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 SALL3Q9BXA9 1300 aa12.19□□□□□ -0.46
FOXN4-201ENST00000299162 ZNF335Q9H4Z2 1342 aaPredicted RBP12.19□□□□□ -0.46
FOXN4-201ENST00000299162 PDIA6Q15084 440 aa12.18□□□□□ -0.46
FOXN4-201ENST00000299162 KAZALD1Q96I82 304 aa12.18□□□□□ -0.46
FOXN4-201ENST00000299162 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
FOXN4-201ENST00000299162 FSD1Q9BTV5 496 aa12.18□□□□□ -0.46
FOXN4-201ENST00000299162 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
FOXN4-201ENST00000299162 HOXB7P09629 217 aa12.17□□□□□ -0.46
FOXN4-201ENST00000299162 CASTP20810 708 aaKnown RBP12.17□□□□□ -0.46
FOXN4-201ENST00000299162 PTH1RQ03431 593 aa12.17□□□□□ -0.46
FOXN4-201ENST00000299162 LARP1Q6PKG0 1096 aaKnown RBP12.17□□□□□ -0.46
FOXN4-201ENST00000299162 SASH1O94885 1247 aa12.17□□□□□ -0.46
FOXN4-201ENST00000299162 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
FOXN4-201ENST00000299162 TTLL7Q6ZT98 887 aa12.17□□□□□ -0.46
FOXN4-201ENST00000299162 BRINP3Q76B58 766 aa12.17□□□□□ -0.46
FOXN4-201ENST00000299162 ECHDC1Q9NTX5 307 aa12.17□□□□□ -0.46
FOXN4-201ENST00000299162 NEURL1BA8MQ27 555 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 HSP90AB4PQ58FF6 505 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 RNF214Q8ND24 703 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 FMNL2Q96PY5 1086 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 MEGF6O75095 1541 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 PPFIA3O75145 1194 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 GLRX3O76003 335 aaKnown RBP12.16□□□□□ -0.46
FOXN4-201ENST00000299162 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 SLFNL1Q499Z3 407 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 GPATCH3Q96I76 525 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
FOXN4-201ENST00000299162 STAP2Q9UGK3 403 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 MARF1Q9Y4F3 1742 aaKnown RBP12.16□□□□□ -0.46
FOXN4-201ENST00000299162 TPM2P07951 284 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 GCKRQ14397 625 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 CHMP4AQ9BY43 222 aa12.16□□□□□ -0.46
FOXN4-201ENST00000299162 PTMAP06454 111 aaKnown RBP12.15□□□□□ -0.46
FOXN4-201ENST00000299162 NUCB2P80303 420 aa12.15□□□□□ -0.46
FOXN4-201ENST00000299162 ALDH1L1O75891 902 aa12.15□□□□□ -0.46
FOXN4-201ENST00000299162 COL9A3Q14050 684 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms