RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 NPHP3Q7Z494 1330 aa12.1□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PARP4Q9UKK3 1724 aaKnown RBP12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ESPNB1AK53 854 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 HSPA2P54652 639 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 OS9Q13438 667 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 TM6SF1Q9BZW5 370 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PALD1Q9ULE6 856 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 COL15A1P39059 1388 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PHF14O94880 888 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 MPRIPQ6WCQ1 1025 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 NUTM1Q86Y26 1132 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 UNC5CLQ8IV45 518 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 KCNB2Q92953 911 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 LSG1Q9H089 658 aaKnown RBP12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ANO8Q9HCE9 1232 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
TNFRSF11B-201ENST00000297350 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 EVI5LQ96CN4 794 aa12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 DIAPH3Q9NSV4 1193 aa12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ERBB3P21860 1342 aa12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 PKP1Q13835 747 aa12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 CAVIN1Q6NZI2 390 aaKnown RBP12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 TMEM87AQ8NBN3 555 aa12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ARXQ96QS3 562 aa12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 SNRKQ9NRH2 765 aa12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ATP6V1DQ9Y5K8 247 aa12.08□□□□□ -0.48
TNFRSF11B-201ENST00000297350 GRM8O00222 908 aa12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 PRPF40AO75400 957 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 IFIT2P09913 472 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 NCLP19338 710 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 LARP1Q6PKG0 1096 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ZSCAN31Q96LW9 406 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 KCNQ3O43525 872 aa12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 RFX7Q2KHR2 1363 aa12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 LRSAM1Q6UWE0 723 aa12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 TTC14Q96N46 770 aa12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 SH2B1Q9NRF2 756 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 LIMCH1Q9UPQ0 1083 aa12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 SPG7Q9UQ90 795 aa12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 SNX14Q9Y5W7 946 aa12.07□□□□□ -0.48
TNFRSF11B-201ENST00000297350 C5P01031 1676 aa12.06□□□□□ -0.48
TNFRSF11B-201ENST00000297350 CPDO75976 1380 aa12.06□□□□□ -0.48
TNFRSF11B-201ENST00000297350 NEXNQ0ZGT2 675 aa12.06□□□□□ -0.48
TNFRSF11B-201ENST00000297350 TICAM2Q86XR7 235 aa12.06□□□□□ -0.48
TNFRSF11B-201ENST00000297350 UBE2Q2Q8WVN8 375 aa12.06□□□□□ -0.48
TNFRSF11B-201ENST00000297350 RAPGEF4Q8WZA2 1011 aa12.06□□□□□ -0.48
TNFRSF11B-201ENST00000297350 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
TNFRSF11B-201ENST00000297350 GPT2Q8TD30 523 aa12.06□□□□□ -0.48
TNFRSF11B-201ENST00000297350 VPS53Q5VIR6 699 aa12.05□□□□□ -0.48
TNFRSF11B-201ENST00000297350 SPATA31A3Q5VYP0 1347 aa12.05□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ZBTB7CA1YPR0 619 aa12.05□□□□□ -0.48
TNFRSF11B-201ENST00000297350 TATP17735 454 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF11B-201ENST00000297350 G3BP1Q13283 466 aaKnown RBP eCLIP12.05□□□□□ -0.48
TNFRSF11B-201ENST00000297350 SLC52A2Q9HAB3 445 aa12.05□□□□□ -0.48
TNFRSF11B-201ENST00000297350 LETM1O95202 739 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ZNF790Q6PG37 636 aa12.04□□□□□ -0.48
TNFRSF11B-201ENST00000297350 PDLIM2Q96JY6 352 aa12.04□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ERBB4Q15303 1308 aa12.04□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ZKSCAN1P17029 563 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ZSCAN30Q86W11 494 aa12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 UPF3BQ9BZI7 483 aaKnown RBP12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 PSMA5P28066 241 aa12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 MCM5P33992 734 aa12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 FAM184AQ8NB25 1140 aa12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ALDH8A1Q9H2A2 487 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 CCDC171Q6TFL3 1326 aa12.03□□□□□ -0.48
TNFRSF11B-201ENST00000297350 RNF20Q5VTR2 975 aa12.02□□□□□ -0.48
TNFRSF11B-201ENST00000297350 IFNL2Q8IZJ0 200 aa12.02□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.48
TNFRSF11B-201ENST00000297350 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.48
TNFRSF11B-201ENST00000297350 JCADQ9P266 1359 aa12.02□□□□□ -0.48
TNFRSF11B-201ENST00000297350 ZSCAN22P10073 491 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PHKG2P15735 406 aa12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PDIA6Q15084 440 aa12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 ANKRD1Q15327 319 aa12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PROSER3Q2NL68 480 aa12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 AACSQ86V21 672 aa12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 DCAF5Q96JK2 942 aa12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 IL25Q9H293 177 aa12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 RPAP1Q9BWH6 1393 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF11B-201ENST00000297350 BRINP3Q76B58 766 aa12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 RIC3Q7Z5B4 369 aa12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 METTL22Q9BUU2 404 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 TMEM63CQ9P1W3 806 aa12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 SMC3Q9UQE7 1217 aa12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 AFDNP55196 1824 aaKnown RBP12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 ZNF335Q9H4Z2 1342 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 ARFGEF2Q9Y6D5 1785 aa12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 ANXA1P04083 346 aa12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 AK2P54819 239 aa12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 SUCLG2Q96I99 432 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms