RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 SMC2O95347 1197 aa17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 VSIG10Q8N0Z9 540 aa17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 RANBP6O60518 1105 aaKnown RBP17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 OFD1O75665 1012 aa17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 GOLGA6L1Q8N7Z2 621 aa17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 WASF1Q92558 559 aa17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 PHAXQ9H814 394 aaKnown RBP17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 BTG4Q9NY30 223 aa17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 SMARCC1Q92922 1105 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
ARHGEF28-202ENST00000296799 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF28-202ENST00000296799 PA2G4Q9UQ80 394 aaKnown RBP17.78■□□□□ 0.44
ARHGEF28-202ENST00000296799 IQCA1Q86XH1 822 aa17.78■□□□□ 0.44
ARHGEF28-202ENST00000296799 TBC1D32Q96NH3 1257 aa17.78■□□□□ 0.44
ARHGEF28-202ENST00000296799 FAM13BQ9NYF5 915 aa17.78■□□□□ 0.44
ARHGEF28-202ENST00000296799 KRT18P05783 430 aaKnown RBP17.78■□□□□ 0.44
ARHGEF28-202ENST00000296799 EPS15P42566 896 aa17.78■□□□□ 0.44
ARHGEF28-202ENST00000296799 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF28-202ENST00000296799 TTF1Q15361 905 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF28-202ENST00000296799 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.44
ARHGEF28-202ENST00000296799 SIRT1Q96EB6 747 aa17.77■□□□□ 0.44
ARHGEF28-202ENST00000296799 CCDC39Q9UFE4 941 aa17.77■□□□□ 0.44
ARHGEF28-202ENST00000296799 CCDC196A0A1B0GTZ2 297 aa17.77■□□□□ 0.44
ARHGEF28-202ENST00000296799 CCDC152Q4G0S7 254 aa17.77■□□□□ 0.44
ARHGEF28-202ENST00000296799 IL27Q8NEV9 243 aa17.77■□□□□ 0.44
ARHGEF28-202ENST00000296799 BCL11BQ9C0K0 894 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF28-202ENST00000296799 DDX21Q9NR30 783 aaKnown RBP eCLIP17.77■□□□□ 0.44
ARHGEF28-202ENST00000296799 CEP85Q6P2H3 762 aa17.77■□□□□ 0.43
ARHGEF28-202ENST00000296799 DCTPP1Q9H773 170 aa17.77■□□□□ 0.43
ARHGEF28-202ENST00000296799 TRIM35Q9UPQ4 493 aa17.77■□□□□ 0.43
ARHGEF28-202ENST00000296799 BRPF1P55201 1214 aaPredicted RBP17.76■□□□□ 0.43
ARHGEF28-202ENST00000296799 HAND2P61296 217 aa17.76■□□□□ 0.43
ARHGEF28-202ENST00000296799 FILIP1LQ4L180 1135 aa17.76■□□□□ 0.43
ARHGEF28-202ENST00000296799 ATP2B3Q16720 1220 aa17.76■□□□□ 0.43
ARHGEF28-202ENST00000296799 RNF41Q9H4P4 317 aaPredicted RBP17.76■□□□□ 0.43
ARHGEF28-202ENST00000296799 NIP7Q9Y221 180 aaKnown RBP eCLIP17.76■□□□□ 0.43
ARHGEF28-202ENST00000296799 IFIT3O14879 490 aaKnown RBP17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 CCDC70Q6NSX1 233 aa17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 G2E3Q7L622 706 aa17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 CRACR2BQ8N4Y2 399 aaPredicted RBP17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 NUP62CLQ9H1M0 184 aa17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 IL15P40933 162 aaPredicted RBP17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 CTCFLQ8NI51 663 aaPredicted RBP17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 ZFYVE16Q7Z3T8 1539 aa17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 ZNF790Q6PG37 636 aa17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 CHL1O00533 1208 aa17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 NAP1L1P55209 391 aaKnown RBP17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 DDX17Q92841 729 aaKnown RBP17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 C8orf76Q96K31 380 aa17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 SETDB2Q96T68 719 aa17.75■□□□□ 0.43
ARHGEF28-202ENST00000296799 CCT2P78371 535 aaKnown RBP17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 GUCY1B3Q02153 619 aa17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 ZNF444Q8N0Y2 327 aaPredicted RBP17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 NLRP3Q96P20 1036 aa17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 MPHOSPH10O00566 681 aaKnown RBP17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 HMGN5P82970 282 aaKnown RBP17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 SMC5Q8IY18 1101 aa17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 PKNOX2Q96KN3 472 aa17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 LMTK3Q96Q04 1460 aa17.74■□□□□ 0.43
ARHGEF28-202ENST00000296799 SPC24Q8NBT2 197 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 R3HCC1Q9Y3T6 440 aaKnown RBP17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 SLC12A7Q9Y666 1083 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 UQCRFS1P1P0C7P4 283 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 MPNDQ8N594 471 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 ZHX3Q9H4I2 956 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 PCDH11XQ9BZA7 1347 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 PCDH11YQ9BZA8 1340 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 SERPINC1P01008 464 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 ANKRD18AQ8IVF6 992 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 SCAND2PQ9GZW5 306 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 SSFA2P28290 1259 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 GRPEL1Q9HAV7 217 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 SLAIN2Q9P270 581 aa17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 IQSEC3Q9UPP2 1182 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-202ENST00000296799 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
ARHGEF28-202ENST00000296799 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
ARHGEF28-202ENST00000296799 SPATA31E1Q6ZUB1 1445 aa17.72■□□□□ 0.43
ARHGEF28-202ENST00000296799 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
ARHGEF28-202ENST00000296799 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF28-202ENST00000296799 LDHCP07864 332 aa17.72■□□□□ 0.43
ARHGEF28-202ENST00000296799 SOS1Q07889 1333 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF28-202ENST00000296799 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
ARHGEF28-202ENST00000296799 SBNO2Q9Y2G9 1366 aa17.72■□□□□ 0.43
ARHGEF28-202ENST00000296799 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF28-202ENST00000296799 SSBP05455 408 aaKnown RBP eCLIP17.71■□□□□ 0.43
ARHGEF28-202ENST00000296799 BRPF3Q9ULD4 1205 aa17.71■□□□□ 0.43
ARHGEF28-202ENST00000296799 SLF2Q8IX21 1173 aa17.71■□□□□ 0.43
ARHGEF28-202ENST00000296799 CCDC173Q0VFZ6 552 aa17.7■□□□□ 0.42
ARHGEF28-202ENST00000296799 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
ARHGEF28-202ENST00000296799 STIM1Q13586 685 aa17.7■□□□□ 0.42
ARHGEF28-202ENST00000296799 ESYT1Q9BSJ8 1104 aa17.7■□□□□ 0.42
ARHGEF28-202ENST00000296799 BABAM1Q9NWV8 329 aa17.7■□□□□ 0.42
ARHGEF28-202ENST00000296799 CEP57L1Q8IYX8 460 aa17.7■□□□□ 0.42
ARHGEF28-202ENST00000296799 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
ARHGEF28-202ENST00000296799 TNPO1Q92973 898 aaKnown RBP17.69■□□□□ 0.42
ARHGEF28-202ENST00000296799 SYCE3A1L190 88 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms