RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 TSPY26PQ9H489 355 aa20.07■□□□□ 0.8
RPN1-201ENST00000296255 HEG1Q9ULI3 1381 aa20.07■□□□□ 0.8
RPN1-201ENST00000296255 CWF19L2Q2TBE0 894 aaKnown RBP20.07■□□□□ 0.8
RPN1-201ENST00000296255 CLASRPQ8N2M8 674 aaKnown RBP20.07■□□□□ 0.8
RPN1-201ENST00000296255 TMEM87AQ8NBN3 555 aa20.07■□□□□ 0.8
RPN1-201ENST00000296255 C9orf78Q9NZ63 289 aaPredicted RBP20.07■□□□□ 0.8
RPN1-201ENST00000296255 ALDH1L1O75891 902 aa20.06■□□□□ 0.8
RPN1-201ENST00000296255 LARGE1O95461 756 aa20.06■□□□□ 0.8
RPN1-201ENST00000296255 ZSCAN22P10073 491 aaPredicted RBP20.06■□□□□ 0.8
RPN1-201ENST00000296255 AMOTQ4VCS5 1084 aa20.06■□□□□ 0.8
RPN1-201ENST00000296255 KSR2Q6VAB6 950 aa20.06■□□□□ 0.8
RPN1-201ENST00000296255 SYAP1Q96A49 352 aaPredicted RBP20.06■□□□□ 0.8
RPN1-201ENST00000296255 DIAPH3Q9NSV4 1193 aa20.06■□□□□ 0.8
RPN1-201ENST00000296255 ECHDC1Q9NTX5 307 aa20.06■□□□□ 0.8
RPN1-201ENST00000296255 NCAPD2Q15021 1401 aa20.06■□□□□ 0.8
RPN1-201ENST00000296255 CASTP20810 708 aaKnown RBP20.05■□□□□ 0.8
RPN1-201ENST00000296255 HYPKQ9NX55 129 aa20.05■□□□□ 0.8
RPN1-201ENST00000296255 CNPY2Q9Y2B0 182 aa20.05■□□□□ 0.8
RPN1-201ENST00000296255 ZNF500O60304 480 aaPredicted RBP20.05■□□□□ 0.8
RPN1-201ENST00000296255 SYT1P21579 422 aa20.05■□□□□ 0.8
RPN1-201ENST00000296255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.05■□□□□ 0.8
RPN1-201ENST00000296255 ADCK5Q3MIX3 580 aa20.04■□□□□ 0.8
RPN1-201ENST00000296255 C1orf141Q5JVX7 400 aa20.04■□□□□ 0.8
RPN1-201ENST00000296255 ARHGEF25Q86VW2 580 aa20.04■□□□□ 0.8
RPN1-201ENST00000296255 KAZALD1Q96I82 304 aa20.04■□□□□ 0.8
RPN1-201ENST00000296255 ZKSCAN5Q9Y2L8 839 aa20.04■□□□□ 0.8
RPN1-201ENST00000296255 STX6O43752 255 aa20.03■□□□□ 0.8
RPN1-201ENST00000296255 GCP02774 474 aa20.03■□□□□ 0.8
RPN1-201ENST00000296255 OVOS2A0A0G2JMS6 1433 aa20.03■□□□□ 0.8
RPN1-201ENST00000296255 DTNBO60941 627 aa20.03■□□□□ 0.8
RPN1-201ENST00000296255 TPM2P07951 284 aa20.03■□□□□ 0.8
RPN1-201ENST00000296255 XPCQ01831 940 aaPredicted RBP20.03■□□□□ 0.8
RPN1-201ENST00000296255 PRPF40BQ6NWY9 871 aaKnown RBP20.03■□□□□ 0.8
RPN1-201ENST00000296255 RUFY2Q8WXA3 655 aa20.03■□□□□ 0.8
RPN1-201ENST00000296255 KCNB2Q92953 911 aa20.03■□□□□ 0.8
RPN1-201ENST00000296255 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.03■□□□□ 0.8
RPN1-201ENST00000296255 IFIT2P09913 472 aaKnown RBP20.02■□□□□ 0.8
RPN1-201ENST00000296255 SIPA1L3O60292 1781 aaPredicted RBP20.02■□□□□ 0.8
RPN1-201ENST00000296255 AACSQ86V21 672 aa20.02■□□□□ 0.79
RPN1-201ENST00000296255 ANKRD24Q8TF21 1146 aa20.02■□□□□ 0.79
RPN1-201ENST00000296255 SUCLG2Q96I99 432 aa20.02■□□□□ 0.79
RPN1-201ENST00000296255 JAKMIP1Q96N16 626 aaKnown RBP20.02■□□□□ 0.79
RPN1-201ENST00000296255 SMC3Q9UQE7 1217 aa20.02■□□□□ 0.79
RPN1-201ENST00000296255 PHF14O94880 888 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 SASH1O94885 1247 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.01■□□□□ 0.79
RPN1-201ENST00000296255 ANKLE2Q86XL3 938 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 ERC1Q8IUD2 1116 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 ZSWIM6Q9HCJ5 1215 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 F13A1P00488 732 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 VPS53Q5VIR6 699 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 UBE2Q2Q8WVN8 375 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 EVI5LQ96CN4 794 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 ORAI2Q96SN7 254 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 PDRG1Q9NUG6 133 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 CCDC39Q9UFE4 941 aa20.01■□□□□ 0.79
RPN1-201ENST00000296255 SLIT3O75094 1523 aa20■□□□□ 0.79
RPN1-201ENST00000296255 NECTIN1Q15223 517 aa20■□□□□ 0.79
RPN1-201ENST00000296255 CCDC83Q8IWF9 413 aa20■□□□□ 0.79
RPN1-201ENST00000296255 GPATCH3Q96I76 525 aa20■□□□□ 0.79
RPN1-201ENST00000296255 AXIN2Q9Y2T1 843 aa20■□□□□ 0.79
RPN1-201ENST00000296255 UTYO14607 1347 aa19.99■□□□□ 0.79
RPN1-201ENST00000296255 GRM8O00222 908 aa19.99■□□□□ 0.79
RPN1-201ENST00000296255 ST3GAL1Q11201 340 aa19.99■□□□□ 0.79
RPN1-201ENST00000296255 LINS1Q8NG48 757 aa19.99■□□□□ 0.79
RPN1-201ENST00000296255 EAF2Q96CJ1 260 aaPredicted RBP19.99■□□□□ 0.79
RPN1-201ENST00000296255 TM6SF1Q9BZW5 370 aa19.99■□□□□ 0.79
RPN1-201ENST00000296255 BICC1Q9H694 974 aaKnown RBP19.99■□□□□ 0.79
RPN1-201ENST00000296255 CCDC171Q6TFL3 1326 aa19.99■□□□□ 0.79
RPN1-201ENST00000296255 PDIA6Q15084 440 aa19.99■□□□□ 0.79
RPN1-201ENST00000296255 DDX54Q8TDD1 881 aaKnown RBP19.99■□□□□ 0.79
RPN1-201ENST00000296255 FAM227BQ96M60 508 aa19.99■□□□□ 0.79
RPN1-201ENST00000296255 GJB2P29033 226 aa19.98■□□□□ 0.79
RPN1-201ENST00000296255 MCM5P33992 734 aa19.98■□□□□ 0.79
RPN1-201ENST00000296255 CCDC183Q5T5S1 534 aa19.98■□□□□ 0.79
RPN1-201ENST00000296255 CAMTA1Q9Y6Y1 1673 aa19.98■□□□□ 0.79
RPN1-201ENST00000296255 COL9A3Q14050 684 aaPredicted RBP19.98■□□□□ 0.79
RPN1-201ENST00000296255 TPRNQ4KMQ1 711 aa19.98■□□□□ 0.79
RPN1-201ENST00000296255 CYP46A1Q9Y6A2 500 aa19.98■□□□□ 0.79
RPN1-201ENST00000296255 RRP9O43818 475 aaKnown RBP19.97■□□□□ 0.79
RPN1-201ENST00000296255 UBE2HP62256 183 aa19.97■□□□□ 0.79
RPN1-201ENST00000296255 AIMP1Q12904 312 aaKnown RBP19.97■□□□□ 0.79
RPN1-201ENST00000296255 HSP90AA2PQ14568 343 aaPredicted RBP19.97■□□□□ 0.79
RPN1-201ENST00000296255 DDX21Q9NR30 783 aaKnown RBP eCLIP19.97■□□□□ 0.79
RPN1-201ENST00000296255 TLR7Q9NYK1 1049 aaKnown RBP19.97■□□□□ 0.79
RPN1-201ENST00000296255 MTMR6Q9Y217 621 aa19.97■□□□□ 0.79
RPN1-201ENST00000296255 NMIQ13287 307 aaPredicted RBP19.97■□□□□ 0.79
RPN1-201ENST00000296255 CCDC8Q9H0W5 538 aaPredicted RBP19.97■□□□□ 0.79
RPN1-201ENST00000296255 HDAC5Q9UQL6 1122 aa19.97■□□□□ 0.79
RPN1-201ENST00000296255 RBM8AQ9Y5S9 174 aaKnown RBP19.97■□□□□ 0.79
RPN1-201ENST00000296255 ADAMTS7Q9UKP4 1686 aa19.97■□□□□ 0.79
RPN1-201ENST00000296255 FIBPO43427 364 aa19.96■□□□□ 0.79
RPN1-201ENST00000296255 IGKV5-2P06315 115 aa19.96■□□□□ 0.79
RPN1-201ENST00000296255 ME3Q16798 604 aa19.96■□□□□ 0.79
RPN1-201ENST00000296255 CREB3L3Q68CJ9 461 aa19.96■□□□□ 0.79
RPN1-201ENST00000296255 ZSCAN31Q96LW9 406 aaPredicted RBP19.96■□□□□ 0.79
RPN1-201ENST00000296255 G3BP1Q13283 466 aaKnown RBP eCLIP19.95■□□□□ 0.781e-11■■■■■ 36.6
RPN1-201ENST00000296255 LMOD2Q6P5Q4 547 aa19.95■□□□□ 0.78
RPN1-201ENST00000296255 MAP4K1Q92918 833 aa19.95■□□□□ 0.78
RPN1-201ENST00000296255 SH2B1Q9NRF2 756 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms