RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 BRIP1Q9BX63 1249 aa11.28□□□□□ -0.6
RTP3-201ENST00000296142 GTF3C3Q9Y5Q9 886 aa11.28□□□□□ -0.6
RTP3-201ENST00000296142 KIF7Q2M1P5 1343 aa11.27□□□□□ -0.61
RTP3-201ENST00000296142 FOXN1O15353 648 aa11.27□□□□□ -0.61
RTP3-201ENST00000296142 CAMTA2O94983 1202 aa11.27□□□□□ -0.61
RTP3-201ENST00000296142 PDE6BP35913 854 aa11.27□□□□□ -0.61
RTP3-201ENST00000296142 EAPPQ56P03 285 aaPredicted RBP11.27□□□□□ -0.61
RTP3-201ENST00000296142 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
RTP3-201ENST00000296142 SETDB2Q96T68 719 aa11.27□□□□□ -0.61
RTP3-201ENST00000296142 TAOK3Q9H2K8 898 aa11.27□□□□□ -0.61
RTP3-201ENST00000296142 USP16Q9Y5T5 823 aa11.27□□□□□ -0.61
RTP3-201ENST00000296142 A0A087WZG4 1122 aa11.26□□□□□ -0.61
RTP3-201ENST00000296142 GNAT3A8MTJ3 354 aa11.26□□□□□ -0.61
RTP3-201ENST00000296142 DZIP3Q86Y13 1208 aaKnown RBP11.26□□□□□ -0.61
RTP3-201ENST00000296142 PHACTR3Q96KR7 559 aa11.26□□□□□ -0.61
RTP3-201ENST00000296142 SCN4AP35499 1836 aa11.25□□□□□ -0.61
RTP3-201ENST00000296142 ZNF541Q9H0D2 1346 aa11.25□□□□□ -0.61
RTP3-201ENST00000296142 SRGNP10124 158 aa11.25□□□□□ -0.61
RTP3-201ENST00000296142 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
RTP3-201ENST00000296142 SLC51AQ86UW1 340 aa11.25□□□□□ -0.61
RTP3-201ENST00000296142 ZNF277Q9NRM2 450 aaPredicted RBP11.25□□□□□ -0.61
RTP3-201ENST00000296142 PER1O15534 1290 aaPredicted RBP11.24□□□□□ -0.61
RTP3-201ENST00000296142 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
RTP3-201ENST00000296142 ST5P78524 1137 aa11.24□□□□□ -0.61
RTP3-201ENST00000296142 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
RTP3-201ENST00000296142 FMNL2Q96PY5 1086 aa11.24□□□□□ -0.61
RTP3-201ENST00000296142 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
RTP3-201ENST00000296142 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
RTP3-201ENST00000296142 NUP98P52948 1817 aa11.23□□□□□ -0.61
RTP3-201ENST00000296142 BTBD11A6QL63 1104 aa11.23□□□□□ -0.61
RTP3-201ENST00000296142 VEGFBP49765 207 aa11.23□□□□□ -0.61
RTP3-201ENST00000296142 FMR1Q06787 632 aaKnown RBP eCLIP11.23□□□□□ -0.61
RTP3-201ENST00000296142 MCM10Q7L590 875 aa11.23□□□□□ -0.61
RTP3-201ENST00000296142 NBPF5PQ86XG9 351 aaPredicted RBP11.23□□□□□ -0.61
RTP3-201ENST00000296142 NGEFQ8N5V2 710 aa11.23□□□□□ -0.61
RTP3-201ENST00000296142 CNKSR1Q969H4 720 aa11.23□□□□□ -0.61
RTP3-201ENST00000296142 MASTLQ96GX5 879 aa11.23□□□□□ -0.61
RTP3-201ENST00000296142 TAF1DQ9H5J8 278 aaPredicted RBP11.23□□□□□ -0.61
RTP3-201ENST00000296142 COL3A1P02461 1466 aaPredicted RBP11.23□□□□□ -0.61
RTP3-201ENST00000296142 DLG5Q8TDM6 1919 aa11.22□□□□□ -0.61
RTP3-201ENST00000296142 PRKAR2BP31323 418 aa11.22□□□□□ -0.61
RTP3-201ENST00000296142 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
RTP3-201ENST00000296142 STYK1Q6J9G0 422 aa11.22□□□□□ -0.61
RTP3-201ENST00000296142 MIS18AQ9NYP9 233 aa11.22□□□□□ -0.61
RTP3-201ENST00000296142 RNF123Q5XPI4 1314 aa11.21□□□□□ -0.61
RTP3-201ENST00000296142 LTBP3Q9NS15 1303 aa11.21□□□□□ -0.61
RTP3-201ENST00000296142 CASP8AP2Q9UKL3 1982 aa11.21□□□□□ -0.61
RTP3-201ENST00000296142 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
RTP3-201ENST00000296142 LBX1P52954 281 aa11.21□□□□□ -0.61
RTP3-201ENST00000296142 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
RTP3-201ENST00000296142 C7orf43Q8WVR3 580 aa11.21□□□□□ -0.61
RTP3-201ENST00000296142 TEX13AQ9BXU3 409 aaPredicted RBP11.21□□□□□ -0.61
RTP3-201ENST00000296142 NIP7Q9Y221 180 aaKnown RBP eCLIP11.21□□□□□ -0.61
RTP3-201ENST00000296142 CNTNAP1P78357 1384 aa11.21□□□□□ -0.62
RTP3-201ENST00000296142 PASKQ96RG2 1323 aa11.2□□□□□ -0.62
RTP3-201ENST00000296142 NBPF26B4DH59 902 aa11.2□□□□□ -0.62
RTP3-201ENST00000296142 ITGBL1O95965 494 aaPredicted RBP11.2□□□□□ -0.62
RTP3-201ENST00000296142 GRM1Q13255 1194 aa11.2□□□□□ -0.62
RTP3-201ENST00000296142 HLFQ16534 295 aa11.2□□□□□ -0.62
RTP3-201ENST00000296142 CCDC93Q567U6 631 aa11.2□□□□□ -0.62
RTP3-201ENST00000296142 NBPF10Q6P3W6 841 aaKnown RBP11.2□□□□□ -0.62
RTP3-201ENST00000296142 LDHDQ86WU2 507 aa11.2□□□□□ -0.62
RTP3-201ENST00000296142 NBPF15Q8N660 670 aa11.2□□□□□ -0.62
RTP3-201ENST00000296142 TAF1P21675 1872 aa11.2□□□□□ -0.62
RTP3-201ENST00000296142 TMEM88BA6NKF7 163 aa11.19□□□□□ -0.62
RTP3-201ENST00000296142 EPHX2P34913 555 aa11.19□□□□□ -0.62
RTP3-201ENST00000296142 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
RTP3-201ENST00000296142 SYNE4Q8N205 404 aa11.19□□□□□ -0.62
RTP3-201ENST00000296142 HACL1Q9UJ83 578 aa11.19□□□□□ -0.62
RTP3-201ENST00000296142 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
RTP3-201ENST00000296142 GJA3Q9Y6H8 435 aa11.19□□□□□ -0.62
RTP3-201ENST00000296142 TRPM7Q96QT4 1865 aa11.19□□□□□ -0.62
RTP3-201ENST00000296142 POLR2AP24928 1970 aaKnown RBP11.19□□□□□ -0.62
RTP3-201ENST00000296142 LTBP1Q14766 1721 aa11.19□□□□□ -0.62
RTP3-201ENST00000296142 COL4A5P29400 1685 aa11.18□□□□□ -0.62
RTP3-201ENST00000296142 IQCA1LA6NCM1 817 aa11.18□□□□□ -0.62
RTP3-201ENST00000296142 NPR1P16066 1061 aa11.18□□□□□ -0.62
RTP3-201ENST00000296142 GTF2E1P29083 439 aaPredicted RBP11.18□□□□□ -0.62
RTP3-201ENST00000296142 FKBP4Q02790 459 aaKnown RBP eCLIP11.18□□□□□ -0.62
RTP3-201ENST00000296142 AIDAQ96BJ3 306 aa11.18□□□□□ -0.62
RTP3-201ENST00000296142 RSPH6AQ9H0K4 717 aa11.18□□□□□ -0.62
RTP3-201ENST00000296142 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
RTP3-201ENST00000296142 ADAMTSL1Q8N6G6 1762 aa11.18□□□□□ -0.62
RTP3-201ENST00000296142 SNRPA1P09661 255 aaKnown RBP11.17□□□□□ -0.62
RTP3-201ENST00000296142 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
RTP3-201ENST00000296142 GPTP24298 496 aa11.17□□□□□ -0.62
RTP3-201ENST00000296142 CTCFP49711 727 aaPredicted RBP11.17□□□□□ -0.62
RTP3-201ENST00000296142 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
RTP3-201ENST00000296142 PAXIP1Q6ZW49 1069 aaPredicted RBP11.17□□□□□ -0.62
RTP3-201ENST00000296142 CNTROBQ8N137 903 aa11.17□□□□□ -0.62
RTP3-201ENST00000296142 L3MBTL3Q96JM7 780 aaPredicted RBP11.17□□□□□ -0.62
RTP3-201ENST00000296142 TSKSQ9UJT2 592 aa11.17□□□□□ -0.62
RTP3-201ENST00000296142 ABT1Q9ULW3 272 aaKnown RBP11.17□□□□□ -0.62
RTP3-201ENST00000296142 ABCC12Q96J65 1359 aa11.16□□□□□ -0.62
RTP3-201ENST00000296142 NEFLP07196 543 aa11.16□□□□□ -0.62
RTP3-201ENST00000296142 IARSP41252 1262 aaKnown RBP11.16□□□□□ -0.62
RTP3-201ENST00000296142 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
RTP3-201ENST00000296142 TPTE2Q6XPS3 522 aa11.16□□□□□ -0.62
RTP3-201ENST00000296142 RTF1Q92541 710 aaKnown RBP11.16□□□□□ -0.62
RTP3-201ENST00000296142 ZNF428Q96B54 188 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms