RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 RNF20Q5VTR2 975 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 RAPGEF4Q8WZA2 1011 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 DBF4Q9UBU7 674 aaPredicted RBP18.41■□□□□ 0.54
CAPN2-201ENST00000295006 IFT172Q9UG01 1749 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 MAP3K5Q99683 1374 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 ADCK5Q3MIX3 580 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 PRDM10Q9NQV6 1147 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 MYO5BQ9ULV0 1848 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 TTC21AQ8NDW8 1320 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 TMEM2Q9UHN6 1383 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 OSBPL3Q9H4L5 887 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 NOL7Q9UMY1 257 aaKnown RBP18.4■□□□□ 0.54
CAPN2-201ENST00000295006 RBM8AQ9Y5S9 174 aaKnown RBP18.4■□□□□ 0.54
CAPN2-201ENST00000295006 SBNO1A3KN83 1393 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 KIF24Q5T7B8 1368 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 PROSER3Q2NL68 480 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 GORABQ5T7V8 394 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 MYD88Q99836 296 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 CHMP4AQ9BY43 222 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 TRIM5Q9C035 493 aa18.4■□□□□ 0.54
CAPN2-201ENST00000295006 IBTKQ9P2D0 1353 aaPredicted RBP18.4■□□□□ 0.54
CAPN2-201ENST00000295006 CFAP74Q9C0B2 1584 aa18.39■□□□□ 0.54
CAPN2-201ENST00000295006 LARGE1O95461 756 aa18.39■□□□□ 0.53
CAPN2-201ENST00000295006 CYP2E1P05181 493 aaPredicted RBP18.39■□□□□ 0.53
CAPN2-201ENST00000295006 HSPA4P34932 840 aa18.39■□□□□ 0.53
CAPN2-201ENST00000295006 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
CAPN2-201ENST00000295006 NEURL4Q96JN8 1562 aa18.39■□□□□ 0.53
CAPN2-201ENST00000295006 VIRMAQ69YN4 1812 aaKnown RBP18.39■□□□□ 0.53
CAPN2-201ENST00000295006 F13A1P00488 732 aa18.39■□□□□ 0.53
CAPN2-201ENST00000295006 KRT85P78386 507 aa18.39■□□□□ 0.53
CAPN2-201ENST00000295006 ZMYND15Q9H091 742 aa18.39■□□□□ 0.53
CAPN2-201ENST00000295006 GUCY1B3Q02153 619 aa18.38■□□□□ 0.53
CAPN2-201ENST00000295006 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
CAPN2-201ENST00000295006 SSH3Q8TE77 659 aa18.38■□□□□ 0.53
CAPN2-201ENST00000295006 INTS4Q96HW7 963 aaKnown RBP18.38■□□□□ 0.53
CAPN2-201ENST00000295006 NMIQ13287 307 aaPredicted RBP18.38■□□□□ 0.53
CAPN2-201ENST00000295006 USP6P35125 1406 aa18.38■□□□□ 0.53
CAPN2-201ENST00000295006 TNMDQ9H2S6 317 aa18.37■□□□□ 0.53
CAPN2-201ENST00000295006 SPATA32Q96LK8 384 aa18.37■□□□□ 0.53
CAPN2-201ENST00000295006 PSMA5P28066 241 aa18.37■□□□□ 0.53
CAPN2-201ENST00000295006 GOLGA6L6A8MZA4 724 aa18.36■□□□□ 0.53
CAPN2-201ENST00000295006 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
CAPN2-201ENST00000295006 UBE2HP62256 183 aa18.36■□□□□ 0.53
CAPN2-201ENST00000295006 SASS6Q6UVJ0 657 aa18.36■□□□□ 0.53
CAPN2-201ENST00000295006 RAD50Q92878 1312 aa18.36■□□□□ 0.53
CAPN2-201ENST00000295006 CCDC192P0DO97 292 aa18.36■□□□□ 0.53
CAPN2-201ENST00000295006 BICC1Q9H694 974 aaKnown RBP18.36■□□□□ 0.53
CAPN2-201ENST00000295006 ERC1Q8IUD2 1116 aa18.35■□□□□ 0.53
CAPN2-201ENST00000295006 NUP62CLQ9H1M0 184 aa18.35■□□□□ 0.53
CAPN2-201ENST00000295006 IGSF1Q8N6C5 1336 aa18.35■□□□□ 0.53
CAPN2-201ENST00000295006 USP32Q8NFA0 1604 aa18.35■□□□□ 0.53
CAPN2-201ENST00000295006 BECN2A8MW95 431 aa18.35■□□□□ 0.53
CAPN2-201ENST00000295006 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
CAPN2-201ENST00000295006 UBE3BQ7Z3V4 1068 aa18.35■□□□□ 0.53
CAPN2-201ENST00000295006 GOLGA6L19H0YKK7 550 aa18.34■□□□□ 0.53
CAPN2-201ENST00000295006 FMNL2Q96PY5 1086 aa18.34■□□□□ 0.53
CAPN2-201ENST00000295006 CRB1P82279 1406 aa18.34■□□□□ 0.53
CAPN2-201ENST00000295006 CCT2P78371 535 aaKnown RBP18.34■□□□□ 0.53
CAPN2-201ENST00000295006 CUL4AQ13619 759 aa18.34■□□□□ 0.53
CAPN2-201ENST00000295006 SF3A1Q15459 793 aaKnown RBP18.34■□□□□ 0.53
CAPN2-201ENST00000295006 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.53
CAPN2-201ENST00000295006 CREB3L3Q68CJ9 461 aa18.33■□□□□ 0.53
CAPN2-201ENST00000295006 CCDC129Q6ZRS4 1044 aa18.33■□□□□ 0.53
CAPN2-201ENST00000295006 COPS6Q7L5N1 327 aa18.33■□□□□ 0.53
CAPN2-201ENST00000295006 RAB11FIP4Q86YS3 637 aa18.33■□□□□ 0.53
CAPN2-201ENST00000295006 ANKRD24Q8TF21 1146 aa18.33■□□□□ 0.53
CAPN2-201ENST00000295006 EVI5LQ96CN4 794 aa18.33■□□□□ 0.53
CAPN2-201ENST00000295006 ARHGEF10O15013 1369 aa18.33■□□□□ 0.53
CAPN2-201ENST00000295006 TMEM131LA2VDJ0 1609 aa18.33■□□□□ 0.52
CAPN2-201ENST00000295006 BEND3Q5T5X7 828 aa18.33■□□□□ 0.52
CAPN2-201ENST00000295006 ORAI2Q96SN7 254 aa18.33■□□□□ 0.52
CAPN2-201ENST00000295006 PDCL3Q9H2J4 239 aa18.33■□□□□ 0.52
CAPN2-201ENST00000295006 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.52
CAPN2-201ENST00000295006 GRM8O00222 908 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 ME3Q16798 604 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 XAGE3Q8WTP9 111 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 SUCLG2Q96I99 432 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 STAP2Q9UGK3 403 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 TAF7LQ5H9L4 462 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 CLEC17AQ6ZS10 378 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 CHST3Q7LGC8 479 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 LSG1Q9H089 658 aaKnown RBP18.32■□□□□ 0.52
CAPN2-201ENST00000295006 DACT1Q9NYF0 836 aa18.32■□□□□ 0.52
CAPN2-201ENST00000295006 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
CAPN2-201ENST00000295006 MAP3K11Q16584 847 aa18.31■□□□□ 0.52
CAPN2-201ENST00000295006 LUZP1Q86V48 1076 aa18.31■□□□□ 0.52
CAPN2-201ENST00000295006 ZSCAN31Q96LW9 406 aaPredicted RBP18.31■□□□□ 0.52
CAPN2-201ENST00000295006 NPHP1O15259 732 aa18.31■□□□□ 0.52
CAPN2-201ENST00000295006 LETM1O95202 739 aaPredicted RBP18.31■□□□□ 0.52
CAPN2-201ENST00000295006 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
CAPN2-201ENST00000295006 NFATC2IPQ8NCF5 419 aa18.31■□□□□ 0.52
CAPN2-201ENST00000295006 EAF2Q96CJ1 260 aaPredicted RBP18.31■□□□□ 0.52
CAPN2-201ENST00000295006 RGS12O14924 1447 aa18.31■□□□□ 0.52
CAPN2-201ENST00000295006 PDCP20941 246 aa18.3■□□□□ 0.52
CAPN2-201ENST00000295006 WASHC4Q2M389 1173 aa18.3■□□□□ 0.52
CAPN2-201ENST00000295006 CDC37L1Q7L3B6 337 aa18.3■□□□□ 0.52
CAPN2-201ENST00000295006 STK11IPQ8N1F8 1099 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms