RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 MRC1P22897 1456 aa17.08■□□□□ 0.33
NXF1-201ENST00000294172 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.33
NXF1-201ENST00000294172 UTYO14607 1347 aa17.08■□□□□ 0.33
NXF1-201ENST00000294172 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.32
NXF1-201ENST00000294172 GCKRQ14397 625 aa17.08■□□□□ 0.32
NXF1-201ENST00000294172 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
NXF1-201ENST00000294172 COL5A2P05997 1499 aaPredicted RBP17.07■□□□□ 0.32
NXF1-201ENST00000294172 IL2RBP14784 551 aa17.07■□□□□ 0.32
NXF1-201ENST00000294172 LRP10Q7Z4F1 713 aa17.07■□□□□ 0.32
NXF1-201ENST00000294172 ERC1Q8IUD2 1116 aa17.07■□□□□ 0.32
NXF1-201ENST00000294172 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
NXF1-201ENST00000294172 MCCP23508 829 aa17.07■□□□□ 0.32
NXF1-201ENST00000294172 SIL1Q9H173 461 aa17.07■□□□□ 0.32
NXF1-201ENST00000294172 IFIT2P09913 472 aaKnown RBP17.06■□□□□ 0.32
NXF1-201ENST00000294172 G3BP1Q13283 466 aaKnown RBP eCLIP17.06■□□□□ 0.32
NXF1-201ENST00000294172 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
NXF1-201ENST00000294172 TUBGCP6Q96RT7 1819 aa17.06■□□□□ 0.32
NXF1-201ENST00000294172 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
NXF1-201ENST00000294172 IL25Q9H293 177 aa17.05■□□□□ 0.32
NXF1-201ENST00000294172 ATP5J2-PTCD1G3V325 749 aa17.05■□□□□ 0.32
NXF1-201ENST00000294172 PTCD1O75127 700 aaKnown RBP17.05■□□□□ 0.32
NXF1-201ENST00000294172 NEK4P51957 841 aa17.05■□□□□ 0.32
NXF1-201ENST00000294172 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
NXF1-201ENST00000294172 AACSQ86V21 672 aa17.05■□□□□ 0.32
NXF1-201ENST00000294172 PALD1Q9ULE6 856 aa17.05■□□□□ 0.32
NXF1-201ENST00000294172 GLRX3O76003 335 aaKnown RBP17.04■□□□□ 0.32
NXF1-201ENST00000294172 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
NXF1-201ENST00000294172 KLHDC4Q8TBB5 520 aa17.04■□□□□ 0.32
NXF1-201ENST00000294172 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
NXF1-201ENST00000294172 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
NXF1-201ENST00000294172 EPHA10Q5JZY3 1008 aa17.04■□□□□ 0.32
NXF1-201ENST00000294172 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
NXF1-201ENST00000294172 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
NXF1-201ENST00000294172 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
NXF1-201ENST00000294172 SASH1O94885 1247 aa17.03■□□□□ 0.32
NXF1-201ENST00000294172 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
NXF1-201ENST00000294172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
NXF1-201ENST00000294172 DDX11L8A8MPP1 907 aa17.02■□□□□ 0.32
NXF1-201ENST00000294172 CWC27Q6UX04 472 aaKnown RBP17.02■□□□□ 0.32
NXF1-201ENST00000294172 GZF1Q9H116 711 aaPredicted RBP17.02■□□□□ 0.32
NXF1-201ENST00000294172 NBPF26B4DH59 902 aa17.02■□□□□ 0.31
NXF1-201ENST00000294172 TRAK2O60296 914 aa17.02■□□□□ 0.31
NXF1-201ENST00000294172 SSFA2P28290 1259 aa17.02■□□□□ 0.31
NXF1-201ENST00000294172 NBPF14Q5TI25 921 aa17.02■□□□□ 0.31
NXF1-201ENST00000294172 NBPF10Q6P3W6 841 aaKnown RBP17.02■□□□□ 0.31
NXF1-201ENST00000294172 NBPF15Q8N660 670 aa17.02■□□□□ 0.31
NXF1-201ENST00000294172 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.31
NXF1-201ENST00000294172 GBP4Q96PP9 640 aa17.02■□□□□ 0.31
NXF1-201ENST00000294172 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.31
NXF1-201ENST00000294172 PARP4Q9UKK3 1724 aaKnown RBP17.02■□□□□ 0.31
NXF1-201ENST00000294172 A1BGP04217 495 aa17.01■□□□□ 0.31
NXF1-201ENST00000294172 A0A087WZG4 1122 aa17.01■□□□□ 0.31
NXF1-201ENST00000294172 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
NXF1-201ENST00000294172 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
NXF1-201ENST00000294172 SGSM2O43147 1006 aa17■□□□□ 0.31
NXF1-201ENST00000294172 ANAPC15P60006 121 aa16.99■□□□□ 0.31
NXF1-201ENST00000294172 DIAPH3Q9NSV4 1193 aa16.99■□□□□ 0.31
NXF1-201ENST00000294172 BTG4Q9NY30 223 aa16.99■□□□□ 0.31
NXF1-201ENST00000294172 TTLL7Q6ZT98 887 aa16.99■□□□□ 0.31
NXF1-201ENST00000294172 NOL8Q76FK4 1167 aaKnown RBP16.99■□□□□ 0.31
NXF1-201ENST00000294172 ZGPATQ8N5A5 531 aaKnown RBP16.99■□□□□ 0.31
NXF1-201ENST00000294172 TLR7Q9NYK1 1049 aaKnown RBP16.99■□□□□ 0.31
NXF1-201ENST00000294172 KIAA1211Q6ZU35 1233 aa16.98■□□□□ 0.31
NXF1-201ENST00000294172 UPF3BQ9BZI7 483 aaKnown RBP16.98■□□□□ 0.31
NXF1-201ENST00000294172 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
NXF1-201ENST00000294172 AK9Q5TCS8 1911 aa16.98■□□□□ 0.31
NXF1-201ENST00000294172 HSPA4P34932 840 aa16.97■□□□□ 0.31
NXF1-201ENST00000294172 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
NXF1-201ENST00000294172 ABCA3Q99758 1704 aa16.97■□□□□ 0.31
NXF1-201ENST00000294172 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
NXF1-201ENST00000294172 TMX3Q96JJ7 454 aa16.97■□□□□ 0.31
NXF1-201ENST00000294172 ZBTB3Q9H5J0 574 aa16.97■□□□□ 0.31
NXF1-201ENST00000294172 GLI3P10071 1580 aa16.96■□□□□ 0.31
NXF1-201ENST00000294172 EVI5LQ96CN4 794 aa16.96■□□□□ 0.31
NXF1-201ENST00000294172 LSG1Q9H089 658 aaKnown RBP16.96■□□□□ 0.31
NXF1-201ENST00000294172 CWC22Q9HCG8 908 aaKnown RBP16.96■□□□□ 0.31
NXF1-201ENST00000294172 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
NXF1-201ENST00000294172 RAD50Q92878 1312 aa16.96■□□□□ 0.31
NXF1-201ENST00000294172 MCM2P49736 904 aa16.96■□□□□ 0.3
NXF1-201ENST00000294172 NUCB2P80303 420 aa16.96■□□□□ 0.3
NXF1-201ENST00000294172 PKP1Q13835 747 aa16.96■□□□□ 0.3
NXF1-201ENST00000294172 BOLA2Q9H3K6 86 aa16.96■□□□□ 0.3
NXF1-201ENST00000294172 RTN4Q9NQC3 1192 aaKnown RBP16.96■□□□□ 0.3
NXF1-201ENST00000294172 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.3
NXF1-201ENST00000294172 EPB41L2O43491 1005 aaKnown RBP16.95■□□□□ 0.3
NXF1-201ENST00000294172 PTPN12Q05209 780 aaKnown RBP16.95■□□□□ 0.3
NXF1-201ENST00000294172 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
NXF1-201ENST00000294172 ARXQ96QS3 562 aa16.95■□□□□ 0.3
NXF1-201ENST00000294172 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
NXF1-201ENST00000294172 RFX5P48382 616 aaPredicted RBP16.95■□□□□ 0.3
NXF1-201ENST00000294172 RABL6Q3YEC7 729 aaPredicted RBP16.95■□□□□ 0.3
NXF1-201ENST00000294172 LMBR1LQ6UX01 489 aa16.95■□□□□ 0.3
NXF1-201ENST00000294172 KCPQ6ZWJ8 1503 aa16.94■□□□□ 0.3
NXF1-201ENST00000294172 CWC25Q9NXE8 425 aaPredicted RBP16.94■□□□□ 0.3
NXF1-201ENST00000294172 LAMB4A4D0S4 1761 aa16.94■□□□□ 0.3
NXF1-201ENST00000294172 ARFGEF2Q9Y6D5 1785 aa16.94■□□□□ 0.3
NXF1-201ENST00000294172 CASP7P55210 303 aa16.93■□□□□ 0.3
NXF1-201ENST00000294172 TFCP2Q12800 502 aa16.93■□□□□ 0.3
NXF1-201ENST00000294172 AFDNP55196 1824 aaKnown RBP16.93■□□□□ 0.3
NXF1-201ENST00000294172 NHSL1Q5SYE7 1610 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms