RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 UPF3BQ9BZI7 483 aaKnown RBP18.3■□□□□ 0.52
CCDC116-201ENST00000292779 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
CCDC116-201ENST00000292779 MEGF6O75095 1541 aa18.3■□□□□ 0.52
CCDC116-201ENST00000292779 ALDH1L1O75891 902 aa18.29■□□□□ 0.52
CCDC116-201ENST00000292779 HSPA4P34932 840 aa18.29■□□□□ 0.52
CCDC116-201ENST00000292779 OS9Q13438 667 aaPredicted RBP18.29■□□□□ 0.52
CCDC116-201ENST00000292779 MTX1Q13505 466 aa18.29■□□□□ 0.52
CCDC116-201ENST00000292779 ABCC6O95255 1503 aa18.29■□□□□ 0.52
CCDC116-201ENST00000292779 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
CCDC116-201ENST00000292779 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
CCDC116-201ENST00000292779 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
CCDC116-201ENST00000292779 RAPGEF4Q8WZA2 1011 aa18.29■□□□□ 0.52
CCDC116-201ENST00000292779 SGSM2O43147 1006 aa18.28■□□□□ 0.52
CCDC116-201ENST00000292779 NCLP19338 710 aaKnown RBP18.28■□□□□ 0.52
CCDC116-201ENST00000292779 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
CCDC116-201ENST00000292779 CHAMP1Q96JM3 812 aa18.28■□□□□ 0.52
CCDC116-201ENST00000292779 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
CCDC116-201ENST00000292779 PRPF40AO75400 957 aaKnown RBP18.28■□□□□ 0.52
CCDC116-201ENST00000292779 FOXD4L5Q5VV16 416 aaPredicted RBP18.28■□□□□ 0.52
CCDC116-201ENST00000292779 FOXD4L4Q8WXT5 416 aaPredicted RBP18.28■□□□□ 0.52
CCDC116-201ENST00000292779 STRN4Q9NRL3 753 aa18.28■□□□□ 0.52
CCDC116-201ENST00000292779 USP42Q9H9J4 1324 aaKnown RBP18.27■□□□□ 0.52
CCDC116-201ENST00000292779 SLC39A6Q13433 755 aa18.27■□□□□ 0.52
CCDC116-201ENST00000292779 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.52
CCDC116-201ENST00000292779 HYPKQ9NX55 129 aa18.27■□□□□ 0.52
CCDC116-201ENST00000292779 ADAMTS2O95450 1211 aa18.26■□□□□ 0.51
CCDC116-201ENST00000292779 INTS4Q96HW7 963 aaKnown RBP18.26■□□□□ 0.51
CCDC116-201ENST00000292779 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
CCDC116-201ENST00000292779 RAD50Q92878 1312 aa18.26■□□□□ 0.51
CCDC116-201ENST00000292779 NUTM2BA6NNL0 878 aaPredicted RBP18.26■□□□□ 0.51
CCDC116-201ENST00000292779 NUTM2EB1AL46 878 aaPredicted RBP18.26■□□□□ 0.51
CCDC116-201ENST00000292779 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
CCDC116-201ENST00000292779 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
CCDC116-201ENST00000292779 NUTM2AQ8IVF1 878 aaPredicted RBP18.26■□□□□ 0.51
CCDC116-201ENST00000292779 PDIA6Q15084 440 aa18.25■□□□□ 0.51
CCDC116-201ENST00000292779 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
CCDC116-201ENST00000292779 BTG4Q9NY30 223 aa18.25■□□□□ 0.51
CCDC116-201ENST00000292779 PA2G4Q9UQ80 394 aaKnown RBP18.25■□□□□ 0.51
CCDC116-201ENST00000292779 WDR17Q8IZU2 1322 aa18.25■□□□□ 0.51
CCDC116-201ENST00000292779 GLRX3O76003 335 aaKnown RBP18.25■□□□□ 0.51
CCDC116-201ENST00000292779 GPT2Q8TD30 523 aa18.25■□□□□ 0.51
CCDC116-201ENST00000292779 LSG1Q9H089 658 aaKnown RBP18.25■□□□□ 0.51
CCDC116-201ENST00000292779 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
CCDC116-201ENST00000292779 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
CCDC116-201ENST00000292779 DDX21Q9NR30 783 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCDC116-201ENST00000292779 KDM6AO15550 1401 aaPredicted RBP18.25■□□□□ 0.51
CCDC116-201ENST00000292779 BRD1O95696 1058 aa18.24■□□□□ 0.51
CCDC116-201ENST00000292779 ZNF445P59923 1031 aa18.24■□□□□ 0.51
CCDC116-201ENST00000292779 ZSCAN23Q3MJ62 389 aa18.24■□□□□ 0.51
CCDC116-201ENST00000292779 CWC27Q6UX04 472 aaKnown RBP18.24■□□□□ 0.51
CCDC116-201ENST00000292779 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
CCDC116-201ENST00000292779 SCN11AQ9UI33 1791 aa18.24■□□□□ 0.51
CCDC116-201ENST00000292779 PHKG2P15735 406 aa18.24■□□□□ 0.51
CCDC116-201ENST00000292779 TATP17735 454 aaPredicted RBP18.24■□□□□ 0.51
CCDC116-201ENST00000292779 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
CCDC116-201ENST00000292779 SNX14Q9Y5W7 946 aa18.24■□□□□ 0.51
CCDC116-201ENST00000292779 TOM1L2Q6ZVM7 507 aa18.23■□□□□ 0.51
CCDC116-201ENST00000292779 HDAC5Q9UQL6 1122 aa18.23■□□□□ 0.51
CCDC116-201ENST00000292779 C5P01031 1676 aa18.23■□□□□ 0.51
CCDC116-201ENST00000292779 COL14A1Q05707 1796 aaKnown RBP18.23■□□□□ 0.51
CCDC116-201ENST00000292779 GRM8O00222 908 aa18.23■□□□□ 0.51
CCDC116-201ENST00000292779 DDX58O95786 925 aaKnown RBP18.23■□□□□ 0.51
CCDC116-201ENST00000292779 SUCLG2Q96I99 432 aa18.23■□□□□ 0.51
CCDC116-201ENST00000292779 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.23■□□□□ 0.51
CCDC116-201ENST00000292779 SPG7Q9UQ90 795 aa18.23■□□□□ 0.51
CCDC116-201ENST00000292779 PLCH1Q4KWH8 1693 aa18.22■□□□□ 0.51
CCDC116-201ENST00000292779 NASPP49321 788 aaPredicted RBP18.22■□□□□ 0.51
CCDC116-201ENST00000292779 KIAA1211Q6ZU35 1233 aa18.22■□□□□ 0.51
CCDC116-201ENST00000292779 ERC1Q8IUD2 1116 aa18.22■□□□□ 0.51
CCDC116-201ENST00000292779 KAZALD1Q96I82 304 aa18.22■□□□□ 0.51
CCDC116-201ENST00000292779 ECHDC1Q9NTX5 307 aa18.22■□□□□ 0.51
CCDC116-201ENST00000292779 UTYO14607 1347 aa18.21■□□□□ 0.51
CCDC116-201ENST00000292779 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
CCDC116-201ENST00000292779 MYL6BP14649 208 aa18.21■□□□□ 0.51
CCDC116-201ENST00000292779 RASEFQ8IZ41 740 aa18.21■□□□□ 0.51
CCDC116-201ENST00000292779 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
CCDC116-201ENST00000292779 RBM27Q9P2N5 1060 aaKnown RBP18.21■□□□□ 0.51
CCDC116-201ENST00000292779 DIAPH3Q9NSV4 1193 aa18.2■□□□□ 0.5
CCDC116-201ENST00000292779 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
CCDC116-201ENST00000292779 RIC3Q7Z5B4 369 aa18.2■□□□□ 0.5
CCDC116-201ENST00000292779 AACSQ86V21 672 aa18.2■□□□□ 0.5
CCDC116-201ENST00000292779 IFNL2Q8IZJ0 200 aa18.2■□□□□ 0.5
CCDC116-201ENST00000292779 GPATCH3Q96I76 525 aa18.2■□□□□ 0.5
CCDC116-201ENST00000292779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC116-201ENST00000292779 SHANK3Q9BYB0 1731 aa18.19■□□□□ 0.5
CCDC116-201ENST00000292779 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
CCDC116-201ENST00000292779 EVA1CP58658 441 aa18.19■□□□□ 0.5
CCDC116-201ENST00000292779 ZNF496Q96IT1 587 aaPredicted RBP18.19■□□□□ 0.5
CCDC116-201ENST00000292779 TTC14Q96N46 770 aa18.19■□□□□ 0.5
CCDC116-201ENST00000292779 NSFL1CQ9UNZ2 370 aaKnown RBP18.19■□□□□ 0.5
CCDC116-201ENST00000292779 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.19■□□□□ 0.5
CCDC116-201ENST00000292779 TRIM44Q96DX7 344 aaPredicted RBP18.19■□□□□ 0.5
CCDC116-201ENST00000292779 CYP27B1O15528 508 aa18.18■□□□□ 0.5
CCDC116-201ENST00000292779 SASH1O94885 1247 aa18.18■□□□□ 0.5
CCDC116-201ENST00000292779 HSPA1LP34931 641 aa18.18■□□□□ 0.5
CCDC116-201ENST00000292779 CLCN1P35523 988 aa18.18■□□□□ 0.5
CCDC116-201ENST00000292779 RUFY2Q8WXA3 655 aa18.18■□□□□ 0.5
CCDC116-201ENST00000292779 NRAPQ86VF7 1730 aa18.18■□□□□ 0.5
CCDC116-201ENST00000292779 AK2P54819 239 aa18.18■□□□□ 0.5
CCDC116-201ENST00000292779 XAGE3Q8WTP9 111 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms