RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 MTX1Q13505 466 aa20.67■□□□□ 0.9
HIF3A-203ENST00000291300 EPHA10Q5JZY3 1008 aa20.67■□□□□ 0.9
HIF3A-203ENST00000291300 BICC1Q9H694 974 aaKnown RBP20.67■□□□□ 0.9
HIF3A-203ENST00000291300 AFDNP55196 1824 aaKnown RBP20.67■□□□□ 0.9
HIF3A-203ENST00000291300 EXOC5O00471 708 aa20.66■□□□□ 0.9
HIF3A-203ENST00000291300 CDC45O75419 566 aa20.66■□□□□ 0.9
HIF3A-203ENST00000291300 TUBGCP6Q96RT7 1819 aa20.66■□□□□ 0.9
HIF3A-203ENST00000291300 NUTM1Q86Y26 1132 aa20.66■□□□□ 0.9
HIF3A-203ENST00000291300 OSBPL3Q9H4L5 887 aa20.66■□□□□ 0.9
HIF3A-203ENST00000291300 NEXNQ0ZGT2 675 aa20.65■□□□□ 0.9
HIF3A-203ENST00000291300 RHPN1Q8TCX5 695 aa20.65■□□□□ 0.9
HIF3A-203ENST00000291300 DNAJC10Q8IXB1 793 aa20.65■□□□□ 0.9
HIF3A-203ENST00000291300 SLC4A9Q96Q91 983 aa20.65■□□□□ 0.9
HIF3A-203ENST00000291300 MX1P20591 662 aa20.64■□□□□ 0.89
HIF3A-203ENST00000291300 PLBD2Q8NHP8 589 aa20.64■□□□□ 0.89
HIF3A-203ENST00000291300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.64■□□□□ 0.89
HIF3A-203ENST00000291300 NUP188Q5SRE5 1749 aa20.64■□□□□ 0.89
HIF3A-203ENST00000291300 BCL9O00512 1426 aa20.64■□□□□ 0.89
HIF3A-203ENST00000291300 ERBB4Q15303 1308 aa20.63■□□□□ 0.89
HIF3A-203ENST00000291300 SYTL4Q96C24 671 aaPredicted RBP20.63■□□□□ 0.89
HIF3A-203ENST00000291300 RBM42Q9BTD8 480 aaKnown RBP20.63■□□□□ 0.89
HIF3A-203ENST00000291300 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.63■□□□□ 0.89
HIF3A-203ENST00000291300 KLHDC4Q8TBB5 520 aa20.62■□□□□ 0.89
HIF3A-203ENST00000291300 ZBTB3Q9H5J0 574 aa20.62■□□□□ 0.89
HIF3A-203ENST00000291300 SLIT2O94813 1529 aa20.62■□□□□ 0.89
HIF3A-203ENST00000291300 DOT1LQ8TEK3 1739 aa20.62■□□□□ 0.89
HIF3A-203ENST00000291300 RAB11FIP3O75154 756 aa20.62■□□□□ 0.89
HIF3A-203ENST00000291300 PRIM1P49642 420 aaKnown RBP20.62■□□□□ 0.89
HIF3A-203ENST00000291300 SPATA31A5Q5VU36 1347 aa20.61■□□□□ 0.89
HIF3A-203ENST00000291300 SPATA31A7Q8IWB4 1347 aa20.61■□□□□ 0.89
HIF3A-203ENST00000291300 UBE3BQ7Z3V4 1068 aa20.61■□□□□ 0.89
HIF3A-203ENST00000291300 UNC5CLQ8IV45 518 aa20.6■□□□□ 0.89
HIF3A-203ENST00000291300 STAP2Q9UGK3 403 aa20.6■□□□□ 0.89
HIF3A-203ENST00000291300 LRP6O75581 1613 aa20.6■□□□□ 0.89
HIF3A-203ENST00000291300 RBM25P49756 843 aaKnown RBP20.6■□□□□ 0.89
HIF3A-203ENST00000291300 MARCH10Q8NA82 808 aaPredicted RBP20.6■□□□□ 0.89
HIF3A-203ENST00000291300 KIF1BPQ96EK5 621 aa20.6■□□□□ 0.89
HIF3A-203ENST00000291300 CCDC9Q9Y3X0 531 aaKnown RBP20.6■□□□□ 0.89
HIF3A-203ENST00000291300 CASP7P55210 303 aa20.59■□□□□ 0.89
HIF3A-203ENST00000291300 DDB1Q16531 1140 aa20.59■□□□□ 0.89
HIF3A-203ENST00000291300 KIF2CQ99661 725 aa20.59■□□□□ 0.89
HIF3A-203ENST00000291300 TBC1D2Q9BYX2 928 aa20.59■□□□□ 0.89
HIF3A-203ENST00000291300 ZNF330Q9Y3S2 320 aaPredicted RBP20.59■□□□□ 0.89
HIF3A-203ENST00000291300 RTL5Q5HYW3 569 aaPredicted RBP20.59■□□□□ 0.89
HIF3A-203ENST00000291300 A0A087WZG4 1122 aa20.58■□□□□ 0.89
HIF3A-203ENST00000291300 OS9Q13438 667 aaPredicted RBP20.58■□□□□ 0.89
HIF3A-203ENST00000291300 ACSBG1Q96GR2 724 aa20.58■□□□□ 0.89
HIF3A-203ENST00000291300 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.89
HIF3A-203ENST00000291300 NWD2Q9ULI1 1742 aa20.58■□□□□ 0.88
HIF3A-203ENST00000291300 TJP1Q07157 1748 aa20.57■□□□□ 0.88
HIF3A-203ENST00000291300 SASH1O94885 1247 aa20.57■□□□□ 0.88
HIF3A-203ENST00000291300 SIL1Q9H173 461 aa20.57■□□□□ 0.88
HIF3A-203ENST00000291300 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
HIF3A-203ENST00000291300 MAP4K4O95819 1239 aaPredicted RBP20.56■□□□□ 0.88
HIF3A-203ENST00000291300 NBR1Q14596 966 aa20.56■□□□□ 0.88
HIF3A-203ENST00000291300 VSIG10Q8N0Z9 540 aa20.56■□□□□ 0.88
HIF3A-203ENST00000291300 PI4K2BQ8TCG2 481 aa20.56■□□□□ 0.88
HIF3A-203ENST00000291300 C8orf37Q96NL8 207 aa20.56■□□□□ 0.88
HIF3A-203ENST00000291300 A0A0G2JS52 829 aa20.55■□□□□ 0.88
HIF3A-203ENST00000291300 HDAC5Q9UQL6 1122 aa20.54■□□□□ 0.88
HIF3A-203ENST00000291300 BCL9LQ86UU0 1499 aa20.54■□□□□ 0.88
HIF3A-203ENST00000291300 CYP19A1P11511 503 aaPredicted RBP20.54■□□□□ 0.88
HIF3A-203ENST00000291300 RFX5P48382 616 aaPredicted RBP20.54■□□□□ 0.88
HIF3A-203ENST00000291300 HSP90AB4PQ58FF6 505 aa20.54■□□□□ 0.88
HIF3A-203ENST00000291300 RILPL2Q969X0 211 aa20.54■□□□□ 0.88
HIF3A-203ENST00000291300 CDCA7Q9BWT1 371 aaPredicted RBP20.54■□□□□ 0.88
HIF3A-203ENST00000291300 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
HIF3A-203ENST00000291300 H7C1W4 665 aa20.53■□□□□ 0.88
HIF3A-203ENST00000291300 FAM98CQ17RN3 349 aaKnown RBP20.53■□□□□ 0.88
HIF3A-203ENST00000291300 RABL6Q3YEC7 729 aaPredicted RBP20.53■□□□□ 0.88
HIF3A-203ENST00000291300 FOXO4P98177 505 aa20.52■□□□□ 0.88
HIF3A-203ENST00000291300 NGLY1Q96IV0 654 aa20.52■□□□□ 0.88
HIF3A-203ENST00000291300 USP26Q9BXU7 913 aa20.52■□□□□ 0.88
HIF3A-203ENST00000291300 ZBTB1Q9Y2K1 713 aa20.52■□□□□ 0.88
HIF3A-203ENST00000291300 STARD3NLO95772 234 aa20.51■□□□□ 0.87
HIF3A-203ENST00000291300 BECN1Q14457 450 aa20.51■□□□□ 0.87
HIF3A-203ENST00000291300 BARGINQ6ZT62 677 aa20.51■□□□□ 0.87
HIF3A-203ENST00000291300 CWC25Q9NXE8 425 aaPredicted RBP20.51■□□□□ 0.87
HIF3A-203ENST00000291300 PTPN12Q05209 780 aaKnown RBP20.51■□□□□ 0.87
HIF3A-203ENST00000291300 EAF2Q96CJ1 260 aaPredicted RBP20.51■□□□□ 0.87
HIF3A-203ENST00000291300 ARXQ96QS3 562 aa20.51■□□□□ 0.87
HIF3A-203ENST00000291300 TEX13AQ9BXU3 409 aaPredicted RBP20.51■□□□□ 0.87
HIF3A-203ENST00000291300 IL25Q9H293 177 aa20.51■□□□□ 0.87
HIF3A-203ENST00000291300 TLR7Q9NYK1 1049 aaKnown RBP20.51■□□□□ 0.87
HIF3A-203ENST00000291300 AOX1Q06278 1338 aa20.51■□□□□ 0.87
HIF3A-203ENST00000291300 JCADQ9P266 1359 aa20.51■□□□□ 0.87
HIF3A-203ENST00000291300 KCNQ2O43526 872 aa20.5■□□□□ 0.87
HIF3A-203ENST00000291300 G3BP1Q13283 466 aaKnown RBP eCLIP20.5■□□□□ 0.87
HIF3A-203ENST00000291300 HLFQ16534 295 aa20.5■□□□□ 0.87
HIF3A-203ENST00000291300 SPRYD3Q8NCJ5 442 aa20.5■□□□□ 0.87
HIF3A-203ENST00000291300 CD2BP2O95400 341 aaKnown RBP20.5■□□□□ 0.87
HIF3A-203ENST00000291300 CHMLP26374 656 aa20.5■□□□□ 0.87
HIF3A-203ENST00000291300 LMBR1LQ6UX01 489 aa20.5■□□□□ 0.87
HIF3A-203ENST00000291300 CLASRPQ8N2M8 674 aaKnown RBP20.5■□□□□ 0.87
HIF3A-203ENST00000291300 ISCA1Q9BUE6 129 aa20.5■□□□□ 0.87
HIF3A-203ENST00000291300 COL15A1P39059 1388 aa20.49■□□□□ 0.87
HIF3A-203ENST00000291300 AACSQ86V21 672 aa20.49■□□□□ 0.87
HIF3A-203ENST00000291300 USP42Q9H9J4 1324 aaKnown RBP20.48■□□□□ 0.87
HIF3A-203ENST00000291300 TCIRG1Q13488 830 aa20.48■□□□□ 0.87
HIF3A-203ENST00000291300 CCDC8Q9H0W5 538 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms