RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 RIPK4P57078 832 aa17.53■□□□□ 0.4
PSMB4-201ENST00000290541 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
PSMB4-201ENST00000290541 TAF1DQ9H5J8 278 aaPredicted RBP17.53■□□□□ 0.4
PSMB4-201ENST00000290541 ADAMTS7Q9UKP4 1686 aa17.52■□□□□ 0.4
PSMB4-201ENST00000290541 RFC4P35249 363 aa17.52■□□□□ 0.4
PSMB4-201ENST00000290541 HABP4Q5JVS0 413 aaKnown RBP17.52■□□□□ 0.4
PSMB4-201ENST00000290541 CAPNS2Q96L46 248 aa17.52■□□□□ 0.4
PSMB4-201ENST00000290541 THUMPD2Q9BTF0 503 aaKnown RBP17.52■□□□□ 0.4
PSMB4-201ENST00000290541 ASAP1Q9ULH1 1129 aa17.52■□□□□ 0.4
PSMB4-201ENST00000290541 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
PSMB4-201ENST00000290541 ABT1Q9ULW3 272 aaKnown RBP17.51■□□□□ 0.39
PSMB4-201ENST00000290541 TRIM35Q9UPQ4 493 aa17.51■□□□□ 0.39
PSMB4-201ENST00000290541 IQCA1LA6NCM1 817 aa17.5■□□□□ 0.39
PSMB4-201ENST00000290541 ERVV-2B6SEH9 535 aa17.5■□□□□ 0.39
PSMB4-201ENST00000290541 POLRMTO00411 1230 aaKnown RBP17.5■□□□□ 0.39
PSMB4-201ENST00000290541 FKBP8Q14318 412 aa17.5■□□□□ 0.39
PSMB4-201ENST00000290541 L3MBTL3Q96JM7 780 aaPredicted RBP17.5■□□□□ 0.39
PSMB4-201ENST00000290541 GPR101Q96P66 508 aaPredicted RBP17.5■□□□□ 0.39
PSMB4-201ENST00000290541 CNTNAP4Q9C0A0 1308 aa17.49■□□□□ 0.39
PSMB4-201ENST00000290541 RC3H1Q5TC82 1133 aaKnown RBP17.49■□□□□ 0.39
PSMB4-201ENST00000290541 NFATC2IPQ8NCF5 419 aa17.49■□□□□ 0.39
PSMB4-201ENST00000290541 SLC4A9Q96Q91 983 aa17.49■□□□□ 0.39
PSMB4-201ENST00000290541 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
PSMB4-201ENST00000290541 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
PSMB4-201ENST00000290541 CEMIPQ8WUJ3 1361 aa17.49■□□□□ 0.39
PSMB4-201ENST00000290541 HTATSF1O43719 755 aaKnown RBP17.48■□□□□ 0.39
PSMB4-201ENST00000290541 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
PSMB4-201ENST00000290541 CABP4P57796 275 aa17.48■□□□□ 0.39
PSMB4-201ENST00000290541 CYP4F22Q6NT55 531 aa17.48■□□□□ 0.39
PSMB4-201ENST00000290541 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
PSMB4-201ENST00000290541 SLC52A2Q9HAB3 445 aa17.48■□□□□ 0.39
PSMB4-201ENST00000290541 TMOD3Q9NYL9 352 aa17.48■□□□□ 0.39
PSMB4-201ENST00000290541 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
PSMB4-201ENST00000290541 SZT2Q5T011 3432 aa17.47■□□□□ 0.39
PSMB4-201ENST00000290541 CA12O43570 354 aa17.47■□□□□ 0.39
PSMB4-201ENST00000290541 ECE1P42892 770 aa17.47■□□□□ 0.39
PSMB4-201ENST00000290541 TTLL6Q8N841 843 aa17.47■□□□□ 0.39
PSMB4-201ENST00000290541 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
PSMB4-201ENST00000290541 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
PSMB4-201ENST00000290541 MRC1P22897 1456 aa17.46■□□□□ 0.39
PSMB4-201ENST00000290541 ATG3Q9NT62 314 aa17.46■□□□□ 0.39
PSMB4-201ENST00000290541 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
PSMB4-201ENST00000290541 CNTROBQ8N137 903 aa17.45■□□□□ 0.38
PSMB4-201ENST00000290541 MKI67P46013 3256 aaKnown RBP17.45■□□□□ 0.38
PSMB4-201ENST00000290541 DLL1O00548 723 aa17.44■□□□□ 0.38
PSMB4-201ENST00000290541 AOC2O75106 756 aa17.44■□□□□ 0.38
PSMB4-201ENST00000290541 TM4SF1P30408 202 aa17.44■□□□□ 0.38
PSMB4-201ENST00000290541 SLC39A6Q13433 755 aa17.44■□□□□ 0.38
PSMB4-201ENST00000290541 EAPPQ56P03 285 aaPredicted RBP17.44■□□□□ 0.38
PSMB4-201ENST00000290541 MAP1SQ66K74 1059 aaPredicted RBP17.44■□□□□ 0.38
PSMB4-201ENST00000290541 MIS18AQ9NYP9 233 aa17.44■□□□□ 0.38
PSMB4-201ENST00000290541 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
PSMB4-201ENST00000290541 COL11A2P13942 1736 aaPredicted RBP17.44■□□□□ 0.38
PSMB4-201ENST00000290541 KCNQ3O43525 872 aa17.43■□□□□ 0.38
PSMB4-201ENST00000290541 MAP2K2P36507 400 aa17.43■□□□□ 0.38
PSMB4-201ENST00000290541 FXR1P51114 621 aaKnown RBP eCLIP17.43■□□□□ 0.38
PSMB4-201ENST00000290541 TEFQ10587 303 aa17.43■□□□□ 0.38
PSMB4-201ENST00000290541 GRM1Q13255 1194 aa17.43■□□□□ 0.38
PSMB4-201ENST00000290541 PAXIP1Q6ZW49 1069 aaPredicted RBP17.43■□□□□ 0.38
PSMB4-201ENST00000290541 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
PSMB4-201ENST00000290541 ANKRD31Q8N7Z5 1873 aa17.42■□□□□ 0.38
PSMB4-201ENST00000290541 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
PSMB4-201ENST00000290541 A0A0C4DFX4 3053 aa17.42■□□□□ 0.38
PSMB4-201ENST00000290541 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
PSMB4-201ENST00000290541 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
PSMB4-201ENST00000290541 CUL9Q8IWT3 2517 aa17.4■□□□□ 0.38
PSMB4-201ENST00000290541 BTBD11A6QL63 1104 aa17.4■□□□□ 0.38
PSMB4-201ENST00000290541 CCDC27Q2M243 656 aa17.4■□□□□ 0.38
PSMB4-201ENST00000290541 NBPF15Q8N660 670 aa17.4■□□□□ 0.38
PSMB4-201ENST00000290541 CLEC11AQ9Y240 323 aa17.4■□□□□ 0.38
PSMB4-201ENST00000290541 CARMIL3Q8ND23 1372 aa17.4■□□□□ 0.38
PSMB4-201ENST00000290541 CACNA1SQ13698 1873 aa17.39■□□□□ 0.38
PSMB4-201ENST00000290541 TJP1Q07157 1748 aa17.39■□□□□ 0.37
PSMB4-201ENST00000290541 ARFGEF2Q9Y6D5 1785 aa17.38■□□□□ 0.37
PSMB4-201ENST00000290541 EPHX2P34913 555 aa17.38■□□□□ 0.37
PSMB4-201ENST00000290541 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
PSMB4-201ENST00000290541 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
PSMB4-201ENST00000290541 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
PSMB4-201ENST00000290541 HACL1Q9UJ83 578 aa17.38■□□□□ 0.37
PSMB4-201ENST00000290541 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
PSMB4-201ENST00000290541 C2CD5Q86YS7 1000 aa17.37■□□□□ 0.37
PSMB4-201ENST00000290541 TAOK3Q9H2K8 898 aa17.37■□□□□ 0.37
PSMB4-201ENST00000290541 LAS1LQ9Y4W2 734 aaKnown RBP17.37■□□□□ 0.37
PSMB4-201ENST00000290541 TLL2Q9Y6L7 1015 aa17.37■□□□□ 0.37
PSMB4-201ENST00000290541 C21orf2O43822 256 aa17.36■□□□□ 0.37
PSMB4-201ENST00000290541 ZNF853P0CG23 659 aa17.36■□□□□ 0.37
PSMB4-201ENST00000290541 ZNF790Q6PG37 636 aa17.36■□□□□ 0.37
PSMB4-201ENST00000290541 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
PSMB4-201ENST00000290541 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
PSMB4-201ENST00000290541 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
PSMB4-201ENST00000290541 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
PSMB4-201ENST00000290541 CHL1O00533 1208 aa17.35■□□□□ 0.37
PSMB4-201ENST00000290541 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
PSMB4-201ENST00000290541 CST9Q5W186 159 aa17.35■□□□□ 0.37
PSMB4-201ENST00000290541 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
PSMB4-201ENST00000290541 ZNF496Q96IT1 587 aaPredicted RBP17.35■□□□□ 0.37
PSMB4-201ENST00000290541 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
PSMB4-201ENST00000290541 SLX4Q8IY92 1834 aa17.35■□□□□ 0.37
PSMB4-201ENST00000290541 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
PSMB4-201ENST00000290541 TSPYL4Q9UJ04 414 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 382.9 ms