RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
KIT-201ENST00000288135 MTMR7Q9Y216 660 aa9.67□□□□□ -0.86
KIT-201ENST00000288135 CCDC158Q5M9N0 1113 aa9.67□□□□□ -0.86
KIT-201ENST00000288135 GOLGA6L4A6NEF3 574 aa9.67□□□□□ -0.86
KIT-201ENST00000288135 GOLIM4O00461 696 aa9.66□□□□□ -0.86
KIT-201ENST00000288135 ZPR1O75312 459 aa9.66□□□□□ -0.86
KIT-201ENST00000288135 HCLS1P14317 486 aaPredicted RBP9.66□□□□□ -0.86
KIT-201ENST00000288135 HSP90AB3PQ58FF7 597 aa9.66□□□□□ -0.86
KIT-201ENST00000288135 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
KIT-201ENST00000288135 VPS37CA5D8V6 355 aaPredicted RBP9.66□□□□□ -0.86
KIT-201ENST00000288135 RAB11FIP3O75154 756 aa9.66□□□□□ -0.86
KIT-201ENST00000288135 PRPF40BQ6NWY9 871 aaKnown RBP9.66□□□□□ -0.86
KIT-201ENST00000288135 SMIM5Q71RC9 77 aa9.66□□□□□ -0.86
KIT-201ENST00000288135 TCEANC2Q96MN5 208 aa9.66□□□□□ -0.86
KIT-201ENST00000288135 ABCF2Q9UG63 623 aa9.66□□□□□ -0.86
KIT-201ENST00000288135 USP21Q9UK80 565 aa9.66□□□□□ -0.86
KIT-201ENST00000288135 GLRX3O76003 335 aaKnown RBP9.66□□□□□ -0.86
KIT-201ENST00000288135 TIMM10P62072 90 aa9.66□□□□□ -0.86
KIT-201ENST00000288135 TMX4Q9H1E5 349 aaPredicted RBP9.66□□□□□ -0.86
KIT-201ENST00000288135 NIP7Q9Y221 180 aaKnown RBP eCLIP9.66□□□□□ -0.86
KIT-201ENST00000288135 ECHDC1Q9NTX5 307 aa9.65□□□□□ -0.86
KIT-201ENST00000288135 TFCP2Q12800 502 aa9.65□□□□□ -0.86
KIT-201ENST00000288135 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
KIT-201ENST00000288135 ALDH1L1O75891 902 aa9.65□□□□□ -0.86
KIT-201ENST00000288135 RRP12Q5JTH9 1297 aaKnown RBP9.65□□□□□ -0.86
KIT-201ENST00000288135 MCTP1Q6DN14 999 aa9.65□□□□□ -0.86
KIT-201ENST00000288135 CARD10Q9BWT7 1032 aa9.65□□□□□ -0.86
KIT-201ENST00000288135 GNL2Q13823 731 aaKnown RBP9.65□□□□□ -0.87
KIT-201ENST00000288135 EDC3Q96F86 508 aaKnown RBP9.65□□□□□ -0.87
KIT-201ENST00000288135 JAKMIP1Q96N16 626 aaKnown RBP9.65□□□□□ -0.87
KIT-201ENST00000288135 CHMP5Q9NZZ3 219 aa9.65□□□□□ -0.87
KIT-201ENST00000288135 MYOM1P52179 1685 aa9.65□□□□□ -0.87
KIT-201ENST00000288135 SOS1Q07889 1333 aaPredicted RBP9.64□□□□□ -0.87
KIT-201ENST00000288135 BEND3Q5T5X7 828 aa9.64□□□□□ -0.87
KIT-201ENST00000288135 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
KIT-201ENST00000288135 MED14O60244 1454 aa9.64□□□□□ -0.87
KIT-201ENST00000288135 MAP2P11137 1827 aaKnown RBP9.64□□□□□ -0.87
KIT-201ENST00000288135 IFIT1P09914 478 aaKnown RBP9.64□□□□□ -0.87
KIT-201ENST00000288135 CHAF1AQ13111 956 aaPredicted RBP9.64□□□□□ -0.87
KIT-201ENST00000288135 TBC1D32Q96NH3 1257 aa9.64□□□□□ -0.87
KIT-201ENST00000288135 C3P01024 1663 aa9.64□□□□□ -0.87
KIT-201ENST00000288135 GCKRQ14397 625 aa9.64□□□□□ -0.87
KIT-201ENST00000288135 PIGBQ92521 554 aa9.64□□□□□ -0.87
KIT-201ENST00000288135 NCBP3Q53F19 620 aaKnown RBP9.64□□□□□ -0.87
KIT-201ENST00000288135 NEURL4Q96JN8 1562 aa9.64□□□□□ -0.87
KIT-201ENST00000288135 RAD21O60216 631 aa9.63□□□□□ -0.87
KIT-201ENST00000288135 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
KIT-201ENST00000288135 TEX13AQ9BXU3 409 aaPredicted RBP9.63□□□□□ -0.87
KIT-201ENST00000288135 JAG2Q9Y219 1238 aa9.63□□□□□ -0.87
KIT-201ENST00000288135 DDX49Q9Y6V7 483 aaKnown RBP9.63□□□□□ -0.87
KIT-201ENST00000288135 RABEP1Q15276 862 aa9.63□□□□□ -0.87
KIT-201ENST00000288135 SLC4A8Q2Y0W8 1093 aa9.63□□□□□ -0.87
KIT-201ENST00000288135 REREQ9P2R6 1566 aa9.63□□□□□ -0.87
KIT-201ENST00000288135 NEURL1BA8MQ27 555 aa9.63□□□□□ -0.87
KIT-201ENST00000288135 TULP1O00294 542 aaPredicted RBP9.63□□□□□ -0.87
KIT-201ENST00000288135 CASTP20810 708 aaKnown RBP9.63□□□□□ -0.87
KIT-201ENST00000288135 TNS3Q68CZ2 1445 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 ANKRD18BA2A2Z9 1011 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 GNPATO15228 680 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 IGHMBP2P38935 993 aaKnown RBP9.62□□□□□ -0.87
KIT-201ENST00000288135 PLBD2Q8NHP8 589 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 UBR1Q8IWV7 1749 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
KIT-201ENST00000288135 IRS4O14654 1257 aaPredicted RBP9.62□□□□□ -0.87
KIT-201ENST00000288135 ZBTB1Q9Y2K1 713 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 ARHGAP23Q9P227 1491 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
KIT-201ENST00000288135 FAM184AQ8NB25 1140 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 AK7Q96M32 723 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 SMC3Q9UQE7 1217 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 BABAM1Q9NWV8 329 aa9.62□□□□□ -0.87
KIT-201ENST00000288135 H3BQV1 296 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 CPA1P15085 419 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 HAND2P61296 217 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 IFFO2Q5TF58 517 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 SYNE4Q8N205 404 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 HOXB7P09629 217 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 RFC4P35249 363 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 SLIT1O75093 1534 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 ERVV-2B6SEH9 535 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 KCNQ2O43526 872 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 RAB11FIP4Q86YS3 637 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 DBNDD2Q9BQY9 259 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 NFXL1Q6ZNB6 911 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 NBPF5PQ86XG9 351 aaPredicted RBP9.61□□□□□ -0.87
KIT-201ENST00000288135 LRP2BPQ9P2M1 347 aa9.61□□□□□ -0.87
KIT-201ENST00000288135 LRRC2Q9BYS8 371 aa9.6□□□□□ -0.87
KIT-201ENST00000288135 RAI14Q9P0K7 980 aa9.6□□□□□ -0.87
KIT-201ENST00000288135 ZNF652Q9Y2D9 606 aa9.6□□□□□ -0.87
KIT-201ENST00000288135 RALYLQ86SE5 291 aaKnown RBP9.6□□□□□ -0.87
KIT-201ENST00000288135 TRDNQ13061 729 aa9.6□□□□□ -0.87
KIT-201ENST00000288135 IFT172Q9UG01 1749 aa9.6□□□□□ -0.87
KIT-201ENST00000288135 CRB1P82279 1406 aa9.6□□□□□ -0.87
KIT-201ENST00000288135 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.6□□□□□ -0.87
KIT-201ENST00000288135 TAF5LO75529 589 aa9.6□□□□□ -0.87
KIT-201ENST00000288135 UNC5CLQ8IV45 518 aa9.6□□□□□ -0.87
KIT-201ENST00000288135 IQSEC2Q5JU85 1478 aa9.59□□□□□ -0.87
KIT-201ENST00000288135 ANKIB1Q9P2G1 1089 aa9.59□□□□□ -0.87
KIT-201ENST00000288135 CCNL1Q9UK58 526 aaPredicted RBP9.59□□□□□ -0.87
KIT-201ENST00000288135 COL3A1P02461 1466 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms