RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 C8orf76Q96K31 380 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 ANO10Q9NW15 660 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 PHF8Q9UPP1 1060 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 SUPT6HQ7KZ85 1726 aaKnown RBP4.69□□□□□ -1.66
SCN3A-201ENST00000283254 ATP2A1O14983 1001 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 NBPF7P0C2Y1 421 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-201ENST00000283254 GNAQP50148 359 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN3A-201ENST00000283254 MSH6P52701 1360 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 RGS22Q8NE09 1264 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC102AQ96A19 550 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 CEP63Q96MT8 703 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 CRNKL1Q9BZJ0 848 aaKnown RBP4.69□□□□□ -1.66
SCN3A-201ENST00000283254 SYNCQ9H7C4 482 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN3A-201ENST00000283254 RMND1Q9NWS8 449 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 NBPF8Q3BBV2 869 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 NBPF14Q5TI25 921 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 MICALCLQ6ZW33 695 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 IQCGQ9H095 443 aaKnown RBP4.69□□□□□ -1.66
SCN3A-201ENST00000283254 ARID4AP29374 1257 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC40Q4G0X9 1142 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 TSHZ2Q9NRE2 1034 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 RANBP6O60518 1105 aaKnown RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 GOLGA8BA8MQT2 603 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 TRAK2O60296 914 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 CHMP4BP1P59074 171 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 MRPS9P82933 396 aaKnown RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 TMCO3Q6UWJ1 677 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 C16orf71Q8IYS4 520 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 CTNNBL1Q8WYA6 563 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 SNAPC4Q5SXM2 1469 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 TOM1O60784 492 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 VIMP08670 466 aaKnown RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 UQCRFS1P1P0C7P4 283 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 GSDMDP57764 484 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 MAP2K1Q02750 393 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 TAF7Q15545 349 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 TTC14Q96N46 770 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 STMN4Q9H169 189 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 ZFYP08048 801 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 UBA7P41226 1012 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 STK3Q13188 491 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 FILIP1Q7Z7B0 1213 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 CERS3Q8IU89 383 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 DNAAF4Q8WXU2 420 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 BEGAINQ9BUH8 593 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 NOB1Q9ULX3 412 aaKnown RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 STX6O43752 255 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 ZNF804AQ7Z570 1209 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 CHD1LQ86WJ1 897 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC77Q9BR77 488 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 SAMM50Q9Y512 469 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 TEX14Q8IWB6 1497 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 MYCNP04198 464 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-201ENST00000283254 RASAL2Q9UJF2 1139 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 PDZRN3Q9UPQ7 1066 aa4.68□□□□□ -1.66
SCN3A-201ENST00000283254 ADGRL1O94910 1474 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 CFTRP13569 1480 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC152Q4G0S7 254 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 CWC27Q6UX04 472 aaKnown RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 SYCP3Q8IZU3 236 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 TMTC2Q8N394 836 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 CEP112Q8N8E3 955 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 PLCD4Q9BRC7 762 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 CNNM2Q9H8M5 875 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 KIAA0586Q9BVV6 1533 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 TDRD12Q587J7 1177 aaKnown RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 PPP1R14CQ8TAE6 165 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 BICD1Q96G01 975 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 CFAP57Q96MR6 1250 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 EYA3Q99504 573 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 DDX19AQ9NUU7 478 aaKnown RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 PIK3R4Q99570 1358 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 LMOD1P29536 600 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 SKIDA1Q1XH10 827 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 TBC1D5Q92609 795 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 NUDT16Q96DE0 195 aaKnown RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 DDX23Q9BUQ8 820 aaKnown RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 C6orf50Q9HD87 102 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 ZNF644Q9H582 1327 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 MINDY4BA8MYZ0 360 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 TAF12Q16514 161 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 MFSD6Q6ZSS7 791 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 GABPB2Q8TAK5 448 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 SPAG5Q96R06 1193 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 NUP88Q99567 741 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 KAT14Q9H8E8 782 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 V9GYY5 206 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 ZBTB24O43167 697 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 TOP1P11387 765 aaKnown RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 KRT13P13646 458 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 MAP3K9P80192 1104 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 KIF18AQ8NI77 898 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 TSR2Q969E8 191 aaKnown RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 PKNOX2Q96KN3 472 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 MAP1BP46821 2468 aaKnown RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 NPHP3Q7Z494 1330 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 GOLGA8AA7E2F4 631 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms