RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 ECHDC1Q9NTX5 307 aa13.79□□□□□ -0.2
SIRPB1-202ENST00000279477 C5P01031 1676 aa13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 PKP1Q13835 747 aa13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 RAPGEF4Q8WZA2 1011 aa13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 PPP1R9BQ96SB3 815 aa13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 ORAI2Q96SN7 254 aa13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 ZDHHC9Q9Y397 364 aa13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 IFIT2P09913 472 aaKnown RBP13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 NCLP19338 710 aaKnown RBP13.78□□□□□ -0.2
SIRPB1-202ENST00000279477 GRM8O00222 908 aa13.77□□□□□ -0.21
SIRPB1-202ENST00000279477 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.21
SIRPB1-202ENST00000279477 EVI5LQ96CN4 794 aa13.77□□□□□ -0.21
SIRPB1-202ENST00000279477 LSG1Q9H089 658 aaKnown RBP13.77□□□□□ -0.21
SIRPB1-202ENST00000279477 SPG7Q9UQ90 795 aa13.77□□□□□ -0.21
SIRPB1-202ENST00000279477 LAMB4A4D0S4 1761 aa13.77□□□□□ -0.21
SIRPB1-202ENST00000279477 PRPF40AO75400 957 aaKnown RBP13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 NEXNQ0ZGT2 675 aa13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 LMOD2Q6P5Q4 547 aa13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 C19orf44Q9H6X5 657 aa13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 ESPNB1AK53 854 aa13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 PHF14O94880 888 aa13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 LARP1Q6PKG0 1096 aaKnown RBP13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
SIRPB1-202ENST00000279477 PDIA4P13667 645 aaKnown RBP13.75□□□□□ -0.21
SIRPB1-202ENST00000279477 TATP17735 454 aaPredicted RBP13.75□□□□□ -0.21
SIRPB1-202ENST00000279477 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
SIRPB1-202ENST00000279477 COL18A1P39060 1754 aa13.75□□□□□ -0.21
SIRPB1-202ENST00000279477 TPM2P07951 284 aa13.75□□□□□ -0.21
SIRPB1-202ENST00000279477 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
SIRPB1-202ENST00000279477 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
SIRPB1-202ENST00000279477 SLC52A2Q9HAB3 445 aa13.75□□□□□ -0.21
SIRPB1-202ENST00000279477 NPHP3Q7Z494 1330 aa13.75□□□□□ -0.21
SIRPB1-202ENST00000279477 ANXA1P04083 346 aa13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 HS1BP3Q53T59 392 aa13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 LIMCH1Q9UPQ0 1083 aa13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 ATP6V1DQ9Y5K8 247 aa13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 COL15A1P39059 1388 aa13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 KDM6AO15550 1401 aaPredicted RBP13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 ZNF790Q6PG37 636 aa13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 LRSAM1Q6UWE0 723 aa13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 ZSCAN31Q96LW9 406 aaPredicted RBP13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 TTC14Q96N46 770 aa13.74□□□□□ -0.21
SIRPB1-202ENST00000279477 AFDNP55196 1824 aaKnown RBP13.73□□□□□ -0.21
SIRPB1-202ENST00000279477 XPCQ01831 940 aaPredicted RBP13.73□□□□□ -0.21
SIRPB1-202ENST00000279477 CWC27Q6UX04 472 aaKnown RBP13.73□□□□□ -0.21
SIRPB1-202ENST00000279477 GPT2Q8TD30 523 aa13.73□□□□□ -0.21
SIRPB1-202ENST00000279477 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
SIRPB1-202ENST00000279477 MAP4K4O95819 1239 aaPredicted RBP13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 PROSER3Q2NL68 480 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 AACSQ86V21 672 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 IFNL2Q8IZJ0 200 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 KCNB2Q92953 911 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 ZKSCAN1P17029 563 aaPredicted RBP13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 VPS53Q5VIR6 699 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 TMEM87AQ8NBN3 555 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 IL25Q9H293 177 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 TNS3Q68CZ2 1445 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 ARFGEF2Q9Y6D5 1785 aa13.72□□□□□ -0.21
SIRPB1-202ENST00000279477 PHKG2P15735 406 aa13.71□□□□□ -0.21
SIRPB1-202ENST00000279477 ATF3P18847 181 aa13.71□□□□□ -0.21
SIRPB1-202ENST00000279477 CWF19L2Q2TBE0 894 aaKnown RBP13.71□□□□□ -0.21
SIRPB1-202ENST00000279477 SUCLG2Q96I99 432 aa13.71□□□□□ -0.21
SIRPB1-202ENST00000279477 SNRKQ9NRH2 765 aa13.71□□□□□ -0.21
SIRPB1-202ENST00000279477 CCDC171Q6TFL3 1326 aa13.71□□□□□ -0.22
SIRPB1-202ENST00000279477 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.22
SIRPB1-202ENST00000279477 MEGF6O75095 1541 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 PSMA5P28066 241 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 AK2P54819 239 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 PDIA6Q15084 440 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 RNF20Q5VTR2 975 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 DCAF5Q96JK2 942 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 BICC1Q9H694 974 aaKnown RBP13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 NLRP2Q9NX02 1062 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 CYP46A1Q9Y6A2 500 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 RPAP1Q9BWH6 1393 aaPredicted RBP13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 SNRPA1P09661 255 aaKnown RBP13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 METTL22Q9BUU2 404 aaPredicted RBP13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 SMC3Q9UQE7 1217 aa13.7□□□□□ -0.22
SIRPB1-202ENST00000279477 ERBB4Q15303 1308 aa13.69□□□□□ -0.22
SIRPB1-202ENST00000279477 NEURL1BA8MQ27 555 aa13.69□□□□□ -0.22
SIRPB1-202ENST00000279477 CASTP20810 708 aaKnown RBP13.69□□□□□ -0.22
SIRPB1-202ENST00000279477 ZSCAN30Q86W11 494 aa13.69□□□□□ -0.22
SIRPB1-202ENST00000279477 TMEM63CQ9P1W3 806 aa13.69□□□□□ -0.22
SIRPB1-202ENST00000279477 CPDO75976 1380 aa13.69□□□□□ -0.22
SIRPB1-202ENST00000279477 LETM1O95202 739 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms