RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 DACT1Q9NYF0 836 aa15.4■□□□□ 0.06
COL8A1-202ENST00000273342 CEBPZQ03701 1054 aaKnown RBP15.4■□□□□ 0.06
COL8A1-202ENST00000273342 ANO6Q4KMQ2 910 aa15.4■□□□□ 0.06
COL8A1-202ENST00000273342 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
COL8A1-202ENST00000273342 EYA1Q99502 592 aa15.4■□□□□ 0.06
COL8A1-202ENST00000273342 A0A087WWV3 80 aa15.39■□□□□ 0.05
COL8A1-202ENST00000273342 PPFIA3O75145 1194 aa15.39■□□□□ 0.05
COL8A1-202ENST00000273342 NUP62CLQ9H1M0 184 aa15.39■□□□□ 0.05
COL8A1-202ENST00000273342 GOLGA6L6A8MZA4 724 aa15.39■□□□□ 0.05
COL8A1-202ENST00000273342 NPHP1O15259 732 aa15.39■□□□□ 0.05
COL8A1-202ENST00000273342 TYRO3Q06418 890 aa15.39■□□□□ 0.05
COL8A1-202ENST00000273342 PA2G4Q9UQ80 394 aaKnown RBP15.39■□□□□ 0.05
COL8A1-202ENST00000273342 ST3GAL1Q11201 340 aa15.38■□□□□ 0.05
COL8A1-202ENST00000273342 TAF7Q15545 349 aaPredicted RBP15.38■□□□□ 0.05
COL8A1-202ENST00000273342 TNMDQ9H2S6 317 aa15.38■□□□□ 0.05
COL8A1-202ENST00000273342 MAP3K11Q16584 847 aa15.38■□□□□ 0.05
COL8A1-202ENST00000273342 CYP46A1Q9Y6A2 500 aa15.38■□□□□ 0.05
COL8A1-202ENST00000273342 MRVI1Q9Y6F6 885 aa15.38■□□□□ 0.05
COL8A1-202ENST00000273342 ZNF771Q7L3S4 317 aaPredicted RBP15.38■□□□□ 0.05
COL8A1-202ENST00000273342 DDX11Q96FC9 970 aa15.38■□□□□ 0.05
COL8A1-202ENST00000273342 TPCN1Q9ULQ1 816 aa15.38■□□□□ 0.05
COL8A1-202ENST00000273342 TMEM131LA2VDJ0 1609 aa15.37■□□□□ 0.05
COL8A1-202ENST00000273342 TNNT1P13805 278 aa15.37■□□□□ 0.05
COL8A1-202ENST00000273342 ARID5BQ14865 1188 aa15.37■□□□□ 0.05
COL8A1-202ENST00000273342 FAM200AQ8TCP9 573 aa15.37■□□□□ 0.05
COL8A1-202ENST00000273342 SSH3Q8TE77 659 aa15.37■□□□□ 0.05
COL8A1-202ENST00000273342 DNAJC25Q9H1X3 360 aa15.37■□□□□ 0.05
COL8A1-202ENST00000273342 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
COL8A1-202ENST00000273342 SSH2Q76I76 1423 aa15.36■□□□□ 0.05
COL8A1-202ENST00000273342 RAB11FIP3O75154 756 aa15.36■□□□□ 0.05
COL8A1-202ENST00000273342 NCBP1Q09161 790 aaKnown RBP15.36■□□□□ 0.05
COL8A1-202ENST00000273342 FAM227BQ96M60 508 aa15.36■□□□□ 0.05
COL8A1-202ENST00000273342 TAF6LQ9Y6J9 622 aa15.36■□□□□ 0.05
COL8A1-202ENST00000273342 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
COL8A1-202ENST00000273342 TPD52L1Q16890 204 aaPredicted RBP15.36■□□□□ 0.05
COL8A1-202ENST00000273342 UTP14CQ5TAP6 766 aaKnown RBP15.36■□□□□ 0.05
COL8A1-202ENST00000273342 NGDNQ8NEJ9 315 aaKnown RBP15.36■□□□□ 0.05
COL8A1-202ENST00000273342 BICD2Q8TD16 824 aa15.36■□□□□ 0.05
COL8A1-202ENST00000273342 KIF1BPQ96EK5 621 aa15.36■□□□□ 0.05
COL8A1-202ENST00000273342 PI4KAP2A4QPH2 592 aa15.35■□□□□ 0.05
COL8A1-202ENST00000273342 KRT85P78386 507 aa15.35■□□□□ 0.05
COL8A1-202ENST00000273342 PI4KAP1Q8N8J0 262 aa15.35■□□□□ 0.05
COL8A1-202ENST00000273342 IL17REQ8NFR9 667 aa15.35■□□□□ 0.05
COL8A1-202ENST00000273342 SPATA32Q96LK8 384 aa15.34■□□□□ 0.05
COL8A1-202ENST00000273342 TRMT1Q9NXH9 659 aaKnown RBP15.34■□□□□ 0.05
COL8A1-202ENST00000273342 GNAT3A8MTJ3 354 aa15.34■□□□□ 0.05
COL8A1-202ENST00000273342 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
COL8A1-202ENST00000273342 SYTL4Q96C24 671 aaPredicted RBP15.34■□□□□ 0.05
COL8A1-202ENST00000273342 NR1I2O75469 434 aa15.33■□□□□ 0.05
COL8A1-202ENST00000273342 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.05
COL8A1-202ENST00000273342 CCDC8Q9H0W5 538 aaPredicted RBP15.33■□□□□ 0.05
COL8A1-202ENST00000273342 RBM8AQ9Y5S9 174 aaKnown RBP15.33■□□□□ 0.05
COL8A1-202ENST00000273342 ZKSCAN1P17029 563 aaPredicted RBP15.33■□□□□ 0.04
COL8A1-202ENST00000273342 CCDC144BQ3MJ40 725 aa15.33■□□□□ 0.04
COL8A1-202ENST00000273342 CCDC144CPQ8IYA2 1237 aa15.33■□□□□ 0.04
COL8A1-202ENST00000273342 CACTINQ8WUQ7 758 aaKnown RBP15.33■□□□□ 0.04
COL8A1-202ENST00000273342 ANKRD7Q92527 254 aa15.33■□□□□ 0.04
COL8A1-202ENST00000273342 GTPBP4Q9BZE4 634 aaKnown RBP15.33■□□□□ 0.04
COL8A1-202ENST00000273342 CHPF2Q9P2E5 772 aa15.33■□□□□ 0.04
COL8A1-202ENST00000273342 CGNQ9P2M7 1197 aaKnown RBP15.33■□□□□ 0.04
COL8A1-202ENST00000273342 CLIP2Q9UDT6 1046 aa15.33■□□□□ 0.04
COL8A1-202ENST00000273342 RIMS1Q86UR5 1692 aaKnown RBP15.33■□□□□ 0.04
COL8A1-202ENST00000273342 ZNF165P49910 485 aa15.33■□□□□ 0.04
COL8A1-202ENST00000273342 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.04
COL8A1-202ENST00000273342 SIL1Q9H173 461 aa15.33■□□□□ 0.04
COL8A1-202ENST00000273342 USP27XA6NNY8 438 aa15.32■□□□□ 0.04
COL8A1-202ENST00000273342 KCNQ3O43525 872 aa15.32■□□□□ 0.04
COL8A1-202ENST00000273342 IFIT2P09913 472 aaKnown RBP15.32■□□□□ 0.04
COL8A1-202ENST00000273342 FILIP1Q7Z7B0 1213 aa15.32■□□□□ 0.04
COL8A1-202ENST00000273342 CLASRPQ8N2M8 674 aaKnown RBP15.32■□□□□ 0.04
COL8A1-202ENST00000273342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.32■□□□□ 0.04
COL8A1-202ENST00000273342 VPS53Q5VIR6 699 aa15.32■□□□□ 0.04
COL8A1-202ENST00000273342 AACSQ86V21 672 aa15.32■□□□□ 0.04
COL8A1-202ENST00000273342 CCDC112Q8NEF3 446 aa15.32■□□□□ 0.04
COL8A1-202ENST00000273342 CCDC9Q9Y3X0 531 aaKnown RBP15.32■□□□□ 0.04
COL8A1-202ENST00000273342 DIP2CQ9Y2E4 1556 aa15.32■□□□□ 0.04
COL8A1-202ENST00000273342 LMOD2Q6P5Q4 547 aa15.31■□□□□ 0.04
COL8A1-202ENST00000273342 ZBTB22O15209 634 aa15.31■□□□□ 0.04
COL8A1-202ENST00000273342 JAK2O60674 1132 aa15.31■□□□□ 0.04
COL8A1-202ENST00000273342 CREB3L3Q68CJ9 461 aa15.31■□□□□ 0.04
COL8A1-202ENST00000273342 BOLA2Q9H3K6 86 aa15.31■□□□□ 0.04
COL8A1-202ENST00000273342 ZSWIM6Q9HCJ5 1215 aa15.31■□□□□ 0.04
COL8A1-202ENST00000273342 GLRX3O76003 335 aaKnown RBP15.3■□□□□ 0.04
COL8A1-202ENST00000273342 ZNF75DP51815 510 aa15.3■□□□□ 0.04
COL8A1-202ENST00000273342 RUFY2Q8WXA3 655 aa15.3■□□□□ 0.04
COL8A1-202ENST00000273342 EDC3Q96F86 508 aaKnown RBP15.3■□□□□ 0.04
COL8A1-202ENST00000273342 TAOK2Q9UL54 1235 aa15.3■□□□□ 0.04
COL8A1-202ENST00000273342 NDUFB9Q9Y6M9 179 aa15.3■□□□□ 0.04
COL8A1-202ENST00000273342 TSPOAP1O95153 1857 aa15.3■□□□□ 0.04
COL8A1-202ENST00000273342 CTIFO43310 598 aaKnown RBP15.3■□□□□ 0.04
COL8A1-202ENST00000273342 TPM3P06753 285 aa15.3■□□□□ 0.04
COL8A1-202ENST00000273342 NLRP6P59044 892 aa15.3■□□□□ 0.04
COL8A1-202ENST00000273342 NMIQ13287 307 aaPredicted RBP15.3■□□□□ 0.04
COL8A1-202ENST00000273342 LRRC2Q9BYS8 371 aa15.3■□□□□ 0.04
COL8A1-202ENST00000273342 FTOQ9C0B1 505 aaKnown RBP eCLIP15.3■□□□□ 0.04
COL8A1-202ENST00000273342 C9orf78Q9NZ63 289 aaPredicted RBP15.3■□□□□ 0.04
COL8A1-202ENST00000273342 CHGBP05060 677 aa15.29■□□□□ 0.04
COL8A1-202ENST00000273342 POLA2Q14181 598 aa15.29■□□□□ 0.04
COL8A1-202ENST00000273342 CWF19L2Q2TBE0 894 aaKnown RBP15.29■□□□□ 0.04
COL8A1-202ENST00000273342 ZSCAN31Q96LW9 406 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms