RNA–Protein interactions for RNA: ENST00000271636.11

CGN-201, Transcript of cingulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGN, Length 5,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-201ENST00000271636 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
CGN-201ENST00000271636 ARHGEF28Q8N1W1 1705 aaKnown RBP17.73■□□□□ 0.43
CGN-201ENST00000271636 FOXD4L6Q3SYB3 417 aaPredicted RBP17.72■□□□□ 0.43
CGN-201ENST00000271636 FOXD4L3Q6VB84 417 aaPredicted RBP17.72■□□□□ 0.43
CGN-201ENST00000271636 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
CGN-201ENST00000271636 G2E3Q7L622 706 aa17.72■□□□□ 0.43
CGN-201ENST00000271636 UBE3BQ7Z3V4 1068 aa17.72■□□□□ 0.43
CGN-201ENST00000271636 NACAP1Q9BZK3 213 aa17.72■□□□□ 0.43
CGN-201ENST00000271636 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
CGN-201ENST00000271636 ARHGEF25Q86VW2 580 aa17.72■□□□□ 0.43
CGN-201ENST00000271636 CDCA7Q9BWT1 371 aaPredicted RBP17.72■□□□□ 0.43
CGN-201ENST00000271636 SLC39A6Q13433 755 aa17.72■□□□□ 0.43
CGN-201ENST00000271636 SAFBQ15424 915 aaKnown RBP eCLIP17.71■□□□□ 0.43
CGN-201ENST00000271636 METTL24Q5JXM2 366 aa17.71■□□□□ 0.43
CGN-201ENST00000271636 BICD2Q8TD16 824 aa17.71■□□□□ 0.43
CGN-201ENST00000271636 LRRC7Q96NW7 1537 aa17.71■□□□□ 0.43
CGN-201ENST00000271636 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.43
CGN-201ENST00000271636 USP19O94966 1318 aa17.71■□□□□ 0.42
CGN-201ENST00000271636 PIP4K2BP78356 416 aa17.7■□□□□ 0.42
CGN-201ENST00000271636 BOLA2Q9H3K6 86 aa17.7■□□□□ 0.42
CGN-201ENST00000271636 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
CGN-201ENST00000271636 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
CGN-201ENST00000271636 IFIT1P09914 478 aaKnown RBP17.7■□□□□ 0.42
CGN-201ENST00000271636 IL17REQ8NFR9 667 aa17.7■□□□□ 0.42
CGN-201ENST00000271636 TOM1O60784 492 aa17.7■□□□□ 0.42
CGN-201ENST00000271636 ESYT1Q9BSJ8 1104 aa17.7■□□□□ 0.42
CGN-201ENST00000271636 CCDC8Q9H0W5 538 aaPredicted RBP17.7■□□□□ 0.42
CGN-201ENST00000271636 ZBTB3Q9H5J0 574 aa17.7■□□□□ 0.42
CGN-201ENST00000271636 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
CGN-201ENST00000271636 CASTP20810 708 aaKnown RBP17.69■□□□□ 0.42
CGN-201ENST00000271636 FKBP4Q02790 459 aaKnown RBP eCLIP17.69■□□□□ 0.42
CGN-201ENST00000271636 LGR6Q9HBX8 967 aa17.69■□□□□ 0.42
CGN-201ENST00000271636 HMG20BQ9P0W2 317 aa17.69■□□□□ 0.42
CGN-201ENST00000271636 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
CGN-201ENST00000271636 SLC3A2P08195 630 aaKnown RBP17.69■□□□□ 0.42
CGN-201ENST00000271636 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
CGN-201ENST00000271636 RASSF8Q8NHQ8 419 aa17.68■□□□□ 0.42
CGN-201ENST00000271636 SLAIN2Q9P270 581 aa17.68■□□□□ 0.42
CGN-201ENST00000271636 TRMT112Q9UI30 125 aaKnown RBP17.68■□□□□ 0.42
CGN-201ENST00000271636 NCAPD2Q15021 1401 aa17.68■□□□□ 0.42
CGN-201ENST00000271636 GOLGA6L19H0YKK7 550 aa17.68■□□□□ 0.42
CGN-201ENST00000271636 HOOK1Q9UJC3 728 aaKnown RBP17.68■□□□□ 0.42
CGN-201ENST00000271636 PRPF40AO75400 957 aaKnown RBP17.67■□□□□ 0.42
CGN-201ENST00000271636 ADAMTS2O95450 1211 aa17.67■□□□□ 0.42
CGN-201ENST00000271636 XBP1P17861 261 aa17.67■□□□□ 0.42
CGN-201ENST00000271636 RBM25P49756 843 aaKnown RBP17.67■□□□□ 0.42
CGN-201ENST00000271636 ZNF396Q96N95 335 aaPredicted RBP17.67■□□□□ 0.42
CGN-201ENST00000271636 IQSEC2Q5JU85 1478 aa17.67■□□□□ 0.42
CGN-201ENST00000271636 IMMTQ16891 758 aaKnown RBP17.67■□□□□ 0.42
CGN-201ENST00000271636 PRPF40BQ6NWY9 871 aaKnown RBP17.67■□□□□ 0.42
CGN-201ENST00000271636 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
CGN-201ENST00000271636 PTPRUQ92729 1446 aa17.67■□□□□ 0.42
CGN-201ENST00000271636 ATP5J2-PTCD1G3V325 749 aa17.67■□□□□ 0.42
CGN-201ENST00000271636 IL15P40933 162 aaPredicted RBP17.66■□□□□ 0.42
CGN-201ENST00000271636 LIMCH1Q9UPQ0 1083 aa17.66■□□□□ 0.42
CGN-201ENST00000271636 METTL22Q9BUU2 404 aaPredicted RBP17.66■□□□□ 0.42
CGN-201ENST00000271636 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
CGN-201ENST00000271636 TTF1Q15361 905 aaPredicted RBP17.65■□□□□ 0.42
CGN-201ENST00000271636 ERBB4Q15303 1308 aa17.65■□□□□ 0.42
CGN-201ENST00000271636 BECN2A8MW95 431 aa17.65■□□□□ 0.42
CGN-201ENST00000271636 ERVV-2B6SEH9 535 aa17.65■□□□□ 0.42
CGN-201ENST00000271636 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
CGN-201ENST00000271636 KRT85P78386 507 aa17.65■□□□□ 0.42
CGN-201ENST00000271636 OVOS2A0A0J9YW53 1432 aa17.65■□□□□ 0.42
CGN-201ENST00000271636 OVOS2Q6IE36 1432 aa17.65■□□□□ 0.42
CGN-201ENST00000271636 RAD50Q92878 1312 aa17.65■□□□□ 0.42
CGN-201ENST00000271636 LARP1BQ659C4 914 aaKnown RBP17.65■□□□□ 0.42
CGN-201ENST00000271636 CAVIN1Q6NZI2 390 aaKnown RBP17.65■□□□□ 0.42
CGN-201ENST00000271636 SLC5A1P13866 664 aa17.64■□□□□ 0.42
CGN-201ENST00000271636 CPS1P31327 1500 aa17.64■□□□□ 0.42
CGN-201ENST00000271636 CDKL5O76039 1030 aa17.64■□□□□ 0.41
CGN-201ENST00000271636 SASS6Q6UVJ0 657 aa17.64■□□□□ 0.41
CGN-201ENST00000271636 C16orf71Q8IYS4 520 aaPredicted RBP17.64■□□□□ 0.41
CGN-201ENST00000271636 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
CGN-201ENST00000271636 PHKG2P15735 406 aa17.63■□□□□ 0.41
CGN-201ENST00000271636 NASPP49321 788 aaPredicted RBP17.63■□□□□ 0.41
CGN-201ENST00000271636 BRMS1Q9HCU9 246 aa17.63■□□□□ 0.41
CGN-201ENST00000271636 KDRP35968 1356 aa17.63■□□□□ 0.41
CGN-201ENST00000271636 GIGYF1O75420 1035 aaPredicted RBP17.63■□□□□ 0.41
CGN-201ENST00000271636 UPF3BQ9BZI7 483 aaKnown RBP17.63■□□□□ 0.41
CGN-201ENST00000271636 MARCH6O60337 910 aa17.62■□□□□ 0.41
CGN-201ENST00000271636 CWF19L2Q2TBE0 894 aaKnown RBP17.62■□□□□ 0.41
CGN-201ENST00000271636 NGLY1Q96IV0 654 aa17.62■□□□□ 0.41
CGN-201ENST00000271636 ZFYP08048 801 aaPredicted RBP17.62■□□□□ 0.41
CGN-201ENST00000271636 DDB1Q16531 1140 aa17.62■□□□□ 0.41
CGN-201ENST00000271636 NOC3LQ8WTT2 800 aaKnown RBP17.62■□□□□ 0.41
CGN-201ENST00000271636 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
CGN-201ENST00000271636 LMBR1LQ6UX01 489 aa17.61■□□□□ 0.41
CGN-201ENST00000271636 CEP170BQ9Y4F5 1589 aaPredicted RBP17.61■□□□□ 0.41
CGN-201ENST00000271636 ZPR1O75312 459 aa17.61■□□□□ 0.41
CGN-201ENST00000271636 AIDAQ96BJ3 306 aa17.61■□□□□ 0.41
CGN-201ENST00000271636 TSPY26PQ9H489 355 aa17.61■□□□□ 0.41
CGN-201ENST00000271636 UQCRFS1P1P0C7P4 283 aa17.6■□□□□ 0.41
CGN-201ENST00000271636 TSHZ3Q63HK5 1081 aa17.6■□□□□ 0.41
CGN-201ENST00000271636 LDHAL6AQ6ZMR3 332 aa17.6■□□□□ 0.41
CGN-201ENST00000271636 TNPO1Q92973 898 aaKnown RBP17.6■□□□□ 0.41
CGN-201ENST00000271636 CDC5LQ99459 802 aaKnown RBP17.6■□□□□ 0.41
CGN-201ENST00000271636 ERBB3P21860 1342 aa17.6■□□□□ 0.41
CGN-201ENST00000271636 MAP3K12Q12852 859 aa17.6■□□□□ 0.41
CGN-201ENST00000271636 LMTK3Q96Q04 1460 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms