RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 SLC52A2Q9HAB3 445 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 ZBTB1Q9Y2K1 713 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 CARMIL3Q8ND23 1372 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 FER1L6Q2WGJ9 1857 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 KDM2BQ8NHM5 1336 aa8.63□□□□□ -1.03
CD53-201ENST00000271324 SIPA1L3O60292 1781 aaPredicted RBP8.63□□□□□ -1.03
CD53-201ENST00000271324 FSTL1Q12841 308 aa8.63□□□□□ -1.03
CD53-201ENST00000271324 CCDC24Q8N4L8 307 aa8.63□□□□□ -1.03
CD53-201ENST00000271324 JMYQ8N9B5 988 aa8.63□□□□□ -1.03
CD53-201ENST00000271324 ZBTB47Q9UFB7 747 aaPredicted RBP8.63□□□□□ -1.03
CD53-201ENST00000271324 MRC1P22897 1456 aa8.62□□□□□ -1.03
CD53-201ENST00000271324 SLX4Q8IY92 1834 aa8.62□□□□□ -1.03
CD53-201ENST00000271324 COL15A1P39059 1388 aa8.62□□□□□ -1.03
CD53-201ENST00000271324 RNMTO43148 476 aaKnown RBP8.62□□□□□ -1.03
CD53-201ENST00000271324 SERPINB2P05120 415 aa8.62□□□□□ -1.03
CD53-201ENST00000271324 EIF4G2P78344 907 aaKnown RBP eCLIP8.62□□□□□ -1.03
CD53-201ENST00000271324 AKAP4Q5JQC9 854 aa8.62□□□□□ -1.03
CD53-201ENST00000271324 NARFQ9UHQ1 456 aa8.62□□□□□ -1.03
CD53-201ENST00000271324 POTECB2RU33 542 aa8.61□□□□□ -1.03
CD53-201ENST00000271324 CANXP27824 592 aaKnown RBP8.61□□□□□ -1.03
CD53-201ENST00000271324 MTHFSDQ2M296 383 aaKnown RBP8.61□□□□□ -1.03
CD53-201ENST00000271324 BICDL1Q6ZP65 573 aa8.61□□□□□ -1.03
CD53-201ENST00000271324 IPO9Q96P70 1041 aaKnown RBP8.61□□□□□ -1.03
CD53-201ENST00000271324 SCN7AQ01118 1682 aa8.6□□□□□ -1.03
CD53-201ENST00000271324 NFKBIEO00221 500 aa8.6□□□□□ -1.03
CD53-201ENST00000271324 AMER1Q5JTC6 1135 aaPredicted RBP8.6□□□□□ -1.03
CD53-201ENST00000271324 C2CD5Q86YS7 1000 aa8.6□□□□□ -1.03
CD53-201ENST00000271324 SMC1BQ8NDV3 1235 aa8.6□□□□□ -1.03
CD53-201ENST00000271324 UBE2Q2Q8WVN8 375 aa8.6□□□□□ -1.03
CD53-201ENST00000271324 GLTPD2A6NH11 291 aa8.59□□□□□ -1.03
CD53-201ENST00000271324 LMNB1P20700 586 aa8.59□□□□□ -1.03
CD53-201ENST00000271324 IRX6P78412 446 aaPredicted RBP8.59□□□□□ -1.03
CD53-201ENST00000271324 LCE2DQ5TA82 110 aaPredicted RBP8.59□□□□□ -1.03
CD53-201ENST00000271324 TBC1D9BQ66K14 1250 aa8.59□□□□□ -1.03
CD53-201ENST00000271324 TTLL6Q8N841 843 aa8.59□□□□□ -1.03
CD53-201ENST00000271324 KNSTRNQ9Y448 316 aa8.59□□□□□ -1.03
CD53-201ENST00000271324 BCORQ6W2J9 1755 aa8.59□□□□□ -1.03
CD53-201ENST00000271324 ARFGEF2Q9Y6D5 1785 aa8.59□□□□□ -1.03
CD53-201ENST00000271324 VEGFAP15692 232 aaPredicted RBP8.59□□□□□ -1.03
CD53-201ENST00000271324 CNGB1Q14028 1251 aaPredicted RBP8.59□□□□□ -1.03
CD53-201ENST00000271324 ZBED9Q6R2W3 1325 aa8.58□□□□□ -1.04
CD53-201ENST00000271324 H0YIN7 160 aa8.58□□□□□ -1.04
CD53-201ENST00000271324 C21orf2O43822 256 aa8.58□□□□□ -1.04
CD53-201ENST00000271324 POTEJP0CG39 1038 aa8.58□□□□□ -1.04
CD53-201ENST00000271324 EIF5P55010 431 aaKnown RBP8.58□□□□□ -1.04
CD53-201ENST00000271324 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
CD53-201ENST00000271324 ZNF622Q969S3 477 aaKnown RBP eCLIP8.58□□□□□ -1.04
CD53-201ENST00000271324 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
CD53-201ENST00000271324 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
CD53-201ENST00000271324 HSPA1AP0DMV8 641 aaKnown RBP8.57□□□□□ -1.04
CD53-201ENST00000271324 HSPA1BP0DMV9 641 aaKnown RBP8.57□□□□□ -1.04
CD53-201ENST00000271324 CD44P16070 742 aaKnown RBP8.57□□□□□ -1.04
CD53-201ENST00000271324 CC2D1BQ5T0F9 858 aaKnown RBP8.57□□□□□ -1.04
CD53-201ENST00000271324 VSIG10Q8N0Z9 540 aa8.57□□□□□ -1.04
CD53-201ENST00000271324 IL17REQ8NFR9 667 aa8.57□□□□□ -1.04
CD53-201ENST00000271324 ZNF496Q96IT1 587 aaPredicted RBP8.57□□□□□ -1.04
CD53-201ENST00000271324 KCNQ3O43525 872 aa8.56□□□□□ -1.04
CD53-201ENST00000271324 PIP4K2AP48426 406 aaPredicted RBP8.56□□□□□ -1.04
CD53-201ENST00000271324 PRR5LQ6MZQ0 368 aa8.56□□□□□ -1.04
CD53-201ENST00000271324 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
CD53-201ENST00000271324 FARP1Q9Y4F1 1045 aaPredicted RBP8.56□□□□□ -1.04
CD53-201ENST00000271324 KIF7Q2M1P5 1343 aa8.56□□□□□ -1.04
CD53-201ENST00000271324 ZC3H4Q9UPT8 1303 aaKnown RBP8.56□□□□□ -1.04
CD53-201ENST00000271324 COL3A1P02461 1466 aaPredicted RBP8.56□□□□□ -1.04
CD53-201ENST00000271324 PER1O15534 1290 aaPredicted RBP8.55□□□□□ -1.04
CD53-201ENST00000271324 DIAPH1O60610 1272 aaKnown RBP8.55□□□□□ -1.04
CD53-201ENST00000271324 A1BGP04217 495 aa8.55□□□□□ -1.04
CD53-201ENST00000271324 MMRN1Q13201 1228 aa8.55□□□□□ -1.04
CD53-201ENST00000271324 B4GALNT3Q6L9W6 998 aa8.55□□□□□ -1.04
CD53-201ENST00000271324 SCN4AP35499 1836 aa8.55□□□□□ -1.04
CD53-201ENST00000271324 PRAMEF22A3QJZ6 481 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 DDNO94850 711 aaPredicted RBP8.54□□□□□ -1.04
CD53-201ENST00000271324 STARD3NLO95772 234 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 ERFEQ4G0M1 354 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 ZNF790Q6PG37 636 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 TTC5Q8N0Z6 440 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 CCDC136Q96JN2 1154 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 BRIP1Q9BX63 1249 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 MKRN1Q9UHC7 482 aaKnown RBP8.54□□□□□ -1.04
CD53-201ENST00000271324 HEG1Q9ULI3 1381 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 U2SURPO15042 1029 aaKnown RBP8.54□□□□□ -1.04
CD53-201ENST00000271324 CAMTA2O94983 1202 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 PDE6BP35913 854 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 OLFM4Q6UX06 510 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 PHACTR3Q96KR7 559 aa8.54□□□□□ -1.04
CD53-201ENST00000271324 A0A087WZG4 1122 aa8.53□□□□□ -1.04
CD53-201ENST00000271324 NUP98P52948 1817 aa8.53□□□□□ -1.04
CD53-201ENST00000271324 TEFQ10587 303 aa8.53□□□□□ -1.04
CD53-201ENST00000271324 DPY19L2Q6NUT2 758 aa8.53□□□□□ -1.04
CD53-201ENST00000271324 CDAN1Q8IWY9 1227 aa8.53□□□□□ -1.04
CD53-201ENST00000271324 DLG5Q8TDM6 1919 aa8.53□□□□□ -1.04
CD53-201ENST00000271324 USP16Q9Y5T5 823 aa8.53□□□□□ -1.04
CD53-201ENST00000271324 GNAT3A8MTJ3 354 aa8.52□□□□□ -1.05
CD53-201ENST00000271324 SRGNP10124 158 aa8.52□□□□□ -1.05
CD53-201ENST00000271324 IL6STP40189 918 aaPredicted RBP8.52□□□□□ -1.05
CD53-201ENST00000271324 PRPF40BQ6NWY9 871 aaKnown RBP8.52□□□□□ -1.05
CD53-201ENST00000271324 CNBD1Q8NA66 436 aa8.52□□□□□ -1.05
CD53-201ENST00000271324 SETDB2Q96T68 719 aa8.52□□□□□ -1.05
CD53-201ENST00000271324 TAOK3Q9H2K8 898 aa8.52□□□□□ -1.05
CD53-201ENST00000271324 DZIP3Q86Y13 1208 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms