RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 CPLX3Q8WVH0 158 aa14.1□□□□□ -0.15
ERBB2-201ENST00000269571 DDX19AQ9NUU7 478 aaKnown RBP14.1□□□□□ -0.15
ERBB2-201ENST00000269571 PAXBP1Q9Y5B6 917 aa14.1□□□□□ -0.15
ERBB2-201ENST00000269571 ABCC10Q5T3U5 1492 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 GADD45BO75293 160 aaPredicted RBP14.09□□□□□ -0.15
ERBB2-201ENST00000269571 KIAA0754O94854 1291 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 ANXA1P04083 346 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 TNRQ92752 1358 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 RIOK3O14730 519 aaKnown RBP14.09□□□□□ -0.15
ERBB2-201ENST00000269571 CDR1P51861 262 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 PPP1R9BQ96SB3 815 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 ANTXR1Q9H6X2 564 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 TBC1D2BQ9UPU7 963 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 BTBD11A6QL63 1104 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 KIF2AO00139 706 aaPredicted RBP14.09□□□□□ -0.15
ERBB2-201ENST00000269571 ERLIN1O75477 346 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 FLIIQ13045 1269 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 KLHL10Q6JEL2 608 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 FAM173BQ6P4H8 233 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 DNAAF4Q8WXU2 420 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 LRRC2Q9BYS8 371 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 VAMP4O75379 141 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 ZNF445P59923 1031 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 RAB11FIP4Q86YS3 637 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 JMYQ8N9B5 988 aa14.09□□□□□ -0.15
ERBB2-201ENST00000269571 CCDC47Q96A33 483 aaKnown RBP14.09□□□□□ -0.15
ERBB2-201ENST00000269571 CCDC191Q8NCU4 936 aa14.08□□□□□ -0.16
ERBB2-201ENST00000269571 ARHGAP29Q52LW3 1261 aa14.08□□□□□ -0.16
ERBB2-201ENST00000269571 PPP1R42Q7Z4L9 355 aa14.08□□□□□ -0.16
ERBB2-201ENST00000269571 BANK1Q8NDB2 785 aa14.08□□□□□ -0.16
ERBB2-201ENST00000269571 CNNM1Q9NRU3 951 aa14.08□□□□□ -0.16
ERBB2-201ENST00000269571 RSPH14Q9UHP6 348 aa14.08□□□□□ -0.16
ERBB2-201ENST00000269571 ACEP12821 1306 aa14.08□□□□□ -0.16
ERBB2-201ENST00000269571 CENPHQ9H3R5 247 aa14.08□□□□□ -0.16
ERBB2-201ENST00000269571 DCTPP1Q9H773 170 aa14.08□□□□□ -0.16
ERBB2-201ENST00000269571 CD2BP2O95400 341 aaKnown RBP14.07□□□□□ -0.16
ERBB2-201ENST00000269571 CT47A1Q5JQC4 288 aaPredicted RBP14.07□□□□□ -0.16
ERBB2-201ENST00000269571 SMARCE1Q969G3 411 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 PHACTR3Q96KR7 559 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 NUTM2BA6NNL0 878 aaPredicted RBP14.07□□□□□ -0.16
ERBB2-201ENST00000269571 NUTM2EB1AL46 878 aaPredicted RBP14.07□□□□□ -0.16
ERBB2-201ENST00000269571 F13A1P00488 732 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 NUTM2AQ8IVF1 878 aaPredicted RBP14.07□□□□□ -0.16
ERBB2-201ENST00000269571 BCL2L12Q9HB09 334 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 ASXL1Q8IXJ9 1541 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 DNMT1P26358 1616 aaKnown RBP14.07□□□□□ -0.16
ERBB2-201ENST00000269571 ZBTB7BO15156 539 aaPredicted RBP14.07□□□□□ -0.16
ERBB2-201ENST00000269571 TOP1P11387 765 aaKnown RBP14.07□□□□□ -0.16
ERBB2-201ENST00000269571 CABP4P57796 275 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 TYRO3Q06418 890 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 KIF4BQ2VIQ3 1234 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 TTC31Q49AM3 519 aaPredicted RBP14.07□□□□□ -0.16
ERBB2-201ENST00000269571 DNAI1Q9UI46 699 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 SMTNL1A8MU46 457 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 CBFA2T2O43439 604 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 SHANK2Q9UPX8 1470 aa14.07□□□□□ -0.16
ERBB2-201ENST00000269571 ERBB4Q15303 1308 aa14.06□□□□□ -0.16
ERBB2-201ENST00000269571 POLR3DP05423 398 aaPredicted RBP14.06□□□□□ -0.16
ERBB2-201ENST00000269571 CCAR1Q8IX12 1150 aaKnown RBP14.06□□□□□ -0.16
ERBB2-201ENST00000269571 ZNF397Q8NF99 534 aaPredicted RBP14.06□□□□□ -0.16
ERBB2-201ENST00000269571 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
ERBB2-201ENST00000269571 CCDC158Q5M9N0 1113 aa14.06□□□□□ -0.16
ERBB2-201ENST00000269571 ZNF526Q8TF50 670 aaPredicted RBP14.06□□□□□ -0.16
ERBB2-201ENST00000269571 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
ERBB2-201ENST00000269571 SART3Q15020 963 aaKnown RBP14.06□□□□□ -0.16
ERBB2-201ENST00000269571 CCDC82Q8N4S0 544 aa14.06□□□□□ -0.16
ERBB2-201ENST00000269571 ARHGAP45Q92619 1136 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 GTF3C6Q969F1 213 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
ERBB2-201ENST00000269571 NCKAP5LQ9HCH0 1330 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 SPATA31E1Q6ZUB1 1445 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 SYT1P21579 422 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 AK2P54819 239 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 KRT32Q14532 448 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 MEX3CQ5U5Q3 659 aaKnown RBP14.05□□□□□ -0.16
ERBB2-201ENST00000269571 IL16Q14005 1332 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 GNG11P61952 73 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 TTC39AQ5SRH9 613 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 CCDC91Q7Z6B0 441 aa14.05□□□□□ -0.16
ERBB2-201ENST00000269571 UHRF1BP1LA0JNW5 1464 aa14.04□□□□□ -0.16
ERBB2-201ENST00000269571 TEX14Q8IWB6 1497 aa14.04□□□□□ -0.16
ERBB2-201ENST00000269571 XBP1P17861 261 aa14.04□□□□□ -0.16
ERBB2-201ENST00000269571 JAKMIP3Q5VZ66 844 aa14.04□□□□□ -0.16
ERBB2-201ENST00000269571 CEP85Q6P2H3 762 aa14.04□□□□□ -0.16
ERBB2-201ENST00000269571 NUP133Q8WUM0 1156 aa14.04□□□□□ -0.16
ERBB2-201ENST00000269571 POLR3AO14802 1390 aaPredicted RBP14.04□□□□□ -0.16
ERBB2-201ENST00000269571 EPB41L2O43491 1005 aaKnown RBP14.04□□□□□ -0.16
ERBB2-201ENST00000269571 CASQ1P31415 396 aa14.04□□□□□ -0.16
ERBB2-201ENST00000269571 PIBF1Q8WXW3 757 aa14.04□□□□□ -0.16
ERBB2-201ENST00000269571 MYCBPQ99417 103 aaPredicted RBP14.04□□□□□ -0.16
ERBB2-201ENST00000269571 PTCD1O75127 700 aaKnown RBP14.03□□□□□ -0.16
ERBB2-201ENST00000269571 STX1AQ16623 288 aa14.03□□□□□ -0.16
ERBB2-201ENST00000269571 HSP90AB2PQ58FF8 381 aa14.03□□□□□ -0.16
ERBB2-201ENST00000269571 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
ERBB2-201ENST00000269571 SLC3A2P08195 630 aaKnown RBP14.03□□□□□ -0.16
ERBB2-201ENST00000269571 CCDC57Q2TAC2 916 aa14.03□□□□□ -0.16
ERBB2-201ENST00000269571 ECHDC1Q9NTX5 307 aa14.03□□□□□ -0.16
ERBB2-201ENST00000269571 ZSCAN12O43309 604 aa14.03□□□□□ -0.16
ERBB2-201ENST00000269571 MCM6Q14566 821 aa14.03□□□□□ -0.16
ERBB2-201ENST00000269571 KIF6Q6ZMV9 814 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms