RNA–Protein interactions for RNA: ENST00000269468.9

MBD1-201, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-201ENST00000269468 MLECQ14165 292 aa17.16■□□□□ 0.34
MBD1-201ENST00000269468 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.16■□□□□ 0.34
MBD1-201ENST00000269468 V9GYY5 206 aaPredicted RBP17.16■□□□□ 0.34
MBD1-201ENST00000269468 PRR36Q9H6K5 1346 aa17.15■□□□□ 0.34
MBD1-201ENST00000269468 TTC21BQ7Z4L5 1316 aa17.15■□□□□ 0.34
MBD1-201ENST00000269468 SSH3Q8TE77 659 aa17.15■□□□□ 0.34
MBD1-201ENST00000269468 CGNQ9P2M7 1197 aaKnown RBP17.15■□□□□ 0.34
MBD1-201ENST00000269468 STK3Q13188 491 aa17.15■□□□□ 0.34
MBD1-201ENST00000269468 CCDC112Q8NEF3 446 aa17.15■□□□□ 0.34
MBD1-201ENST00000269468 NBPF7P0C2Y1 421 aaPredicted RBP17.14■□□□□ 0.33
MBD1-201ENST00000269468 ST3GAL1Q11201 340 aa17.14■□□□□ 0.33
MBD1-201ENST00000269468 COL9A3Q14050 684 aaPredicted RBP17.14■□□□□ 0.33
MBD1-201ENST00000269468 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
MBD1-201ENST00000269468 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
MBD1-201ENST00000269468 DNAJC25Q9H1X3 360 aa17.14■□□□□ 0.33
MBD1-201ENST00000269468 AOX1Q06278 1338 aa17.14■□□□□ 0.33
MBD1-201ENST00000269468 OGFRQ9NZT2 677 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 METP08581 1390 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 ACEP12821 1306 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 BICD2Q8TD16 824 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 SPATA32Q96LK8 384 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 FEZ1Q99689 392 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 CLIP2Q9UDT6 1046 aa17.13■□□□□ 0.33
MBD1-201ENST00000269468 SMTNL1A8MU46 457 aa17.12■□□□□ 0.33
MBD1-201ENST00000269468 VPS53Q5VIR6 699 aa17.12■□□□□ 0.33
MBD1-201ENST00000269468 NPHP1O15259 732 aa17.12■□□□□ 0.33
MBD1-201ENST00000269468 ZNF75DP51815 510 aa17.12■□□□□ 0.33
MBD1-201ENST00000269468 CACTINQ8WUQ7 758 aaKnown RBP17.12■□□□□ 0.33
MBD1-201ENST00000269468 ZSCAN31Q96LW9 406 aaPredicted RBP17.12■□□□□ 0.33
MBD1-201ENST00000269468 CTNNA3Q9UI47 895 aa17.12■□□□□ 0.33
MBD1-201ENST00000269468 PREX1Q8TCU6 1659 aa17.12■□□□□ 0.33
MBD1-201ENST00000269468 AMPHP49418 695 aa17.11■□□□□ 0.33
MBD1-201ENST00000269468 ZNF165P49910 485 aa17.11■□□□□ 0.33
MBD1-201ENST00000269468 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
MBD1-201ENST00000269468 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
MBD1-201ENST00000269468 EPB41L2O43491 1005 aaKnown RBP17.11■□□□□ 0.33
MBD1-201ENST00000269468 ZKSCAN1P17029 563 aaPredicted RBP17.11■□□□□ 0.33
MBD1-201ENST00000269468 ARID5BQ14865 1188 aa17.11■□□□□ 0.33
MBD1-201ENST00000269468 RUFY2Q8WXA3 655 aa17.11■□□□□ 0.33
MBD1-201ENST00000269468 SH2B1Q9NRF2 756 aaPredicted RBP17.11■□□□□ 0.33
MBD1-201ENST00000269468 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
MBD1-201ENST00000269468 ANXA1P04083 346 aa17.11■□□□□ 0.33
MBD1-201ENST00000269468 CEBPZQ03701 1054 aaKnown RBP17.1■□□□□ 0.33
MBD1-201ENST00000269468 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
MBD1-201ENST00000269468 CCDC144CPQ8IYA2 1237 aa17.1■□□□□ 0.33
MBD1-201ENST00000269468 EYA1Q99502 592 aa17.1■□□□□ 0.33
MBD1-201ENST00000269468 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
MBD1-201ENST00000269468 ZSWIM6Q9HCJ5 1215 aa17.1■□□□□ 0.33
MBD1-201ENST00000269468 NR1I2O75469 434 aa17.09■□□□□ 0.33
MBD1-201ENST00000269468 TAF7Q15545 349 aaPredicted RBP17.09■□□□□ 0.33
MBD1-201ENST00000269468 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
MBD1-201ENST00000269468 RBM8AQ9Y5S9 174 aaKnown RBP17.09■□□□□ 0.33
MBD1-201ENST00000269468 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
MBD1-201ENST00000269468 GLRX3O76003 335 aaKnown RBP17.09■□□□□ 0.33
MBD1-201ENST00000269468 CEP135Q66GS9 1140 aa17.09■□□□□ 0.33
MBD1-201ENST00000269468 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
MBD1-201ENST00000269468 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
MBD1-201ENST00000269468 USP27XA6NNY8 438 aa17.08■□□□□ 0.33
MBD1-201ENST00000269468 DDX11Q96FC9 970 aa17.08■□□□□ 0.33
MBD1-201ENST00000269468 FAM227BQ96M60 508 aa17.08■□□□□ 0.33
MBD1-201ENST00000269468 FOSBP53539 338 aa17.08■□□□□ 0.32
MBD1-201ENST00000269468 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.32
MBD1-201ENST00000269468 A0A087WWV3 80 aa17.08■□□□□ 0.32
MBD1-201ENST00000269468 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
MBD1-201ENST00000269468 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
MBD1-201ENST00000269468 CLASRPQ8N2M8 674 aaKnown RBP17.08■□□□□ 0.32
MBD1-201ENST00000269468 FILIP1Q7Z7B0 1213 aa17.07■□□□□ 0.32
MBD1-201ENST00000269468 GOLGA6L19H0YKK7 550 aa17.07■□□□□ 0.32
MBD1-201ENST00000269468 ZBTB22O15209 634 aa17.07■□□□□ 0.32
MBD1-201ENST00000269468 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
MBD1-201ENST00000269468 POLA2Q14181 598 aa17.07■□□□□ 0.32
MBD1-201ENST00000269468 NUTM2GQ5VZR2 741 aa17.07■□□□□ 0.32
MBD1-201ENST00000269468 LEO1Q8WVC0 666 aaPredicted RBP17.07■□□□□ 0.32
MBD1-201ENST00000269468 PLA2G4DQ86XP0 818 aa17.06■□□□□ 0.32
MBD1-201ENST00000269468 DDX41Q9UJV9 622 aaKnown RBP17.06■□□□□ 0.32
MBD1-201ENST00000269468 PAXBP1Q9Y5B6 917 aa17.06■□□□□ 0.32
MBD1-201ENST00000269468 PI4KAP2A4QPH2 592 aa17.06■□□□□ 0.32
MBD1-201ENST00000269468 PI4KAP1Q8N8J0 262 aa17.06■□□□□ 0.32
MBD1-201ENST00000269468 IL17REQ8NFR9 667 aa17.06■□□□□ 0.32
MBD1-201ENST00000269468 SCAND2PQ9GZW5 306 aaPredicted RBP17.06■□□□□ 0.32
MBD1-201ENST00000269468 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
MBD1-201ENST00000269468 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
MBD1-201ENST00000269468 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
MBD1-201ENST00000269468 TAF6LQ9Y6J9 622 aa17.06■□□□□ 0.32
MBD1-201ENST00000269468 CCDC171Q6TFL3 1326 aa17.05■□□□□ 0.32
MBD1-201ENST00000269468 CLSTN2Q9H4D0 955 aa17.05■□□□□ 0.32
MBD1-201ENST00000269468 ERICH4A6NGS2 130 aa17.05■□□□□ 0.32
MBD1-201ENST00000269468 PDCP20941 246 aa17.05■□□□□ 0.32
MBD1-201ENST00000269468 NECTIN1Q15223 517 aa17.05■□□□□ 0.32
MBD1-201ENST00000269468 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
MBD1-201ENST00000269468 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
MBD1-201ENST00000269468 DDX19AQ9NUU7 478 aaKnown RBP17.05■□□□□ 0.32
MBD1-201ENST00000269468 BLOC1S2Q6QNY1 142 aa17.04■□□□□ 0.32
MBD1-201ENST00000269468 KIF18AQ8NI77 898 aa17.04■□□□□ 0.32
MBD1-201ENST00000269468 PGBD1Q96JS3 809 aa17.04■□□□□ 0.32
MBD1-201ENST00000269468 NPHP3Q7Z494 1330 aa17.04■□□□□ 0.32
MBD1-201ENST00000269468 AACSQ86V21 672 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms