RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 PTCD1O75127 700 aaKnown RBP28.51■■■□□ 2.16
RAB40B-201ENST00000269347 METTL22Q9BUU2 404 aaPredicted RBP28.51■■■□□ 2.16
RAB40B-201ENST00000269347 ANKRD13DQ6ZTN6 518 aa28.51■■■□□ 2.15
RAB40B-201ENST00000269347 A1BGP04217 495 aa28.5■■■□□ 2.15
RAB40B-201ENST00000269347 GCKRQ14397 625 aa28.5■■■□□ 2.15
RAB40B-201ENST00000269347 IL25Q9H293 177 aa28.5■■■□□ 2.15
RAB40B-201ENST00000269347 MAP4K4O95819 1239 aaPredicted RBP28.49■■■□□ 2.15
RAB40B-201ENST00000269347 PI4K2BQ8TCG2 481 aa28.49■■■□□ 2.15
RAB40B-201ENST00000269347 ATP5J2-PTCD1G3V325 749 aa28.48■■■□□ 2.15
RAB40B-201ENST00000269347 RAB11FIP3O75154 756 aa28.48■■■□□ 2.15
RAB40B-201ENST00000269347 KLHDC4Q8TBB5 520 aa28.48■■■□□ 2.15
RAB40B-201ENST00000269347 AHDC1Q5TGY3 1603 aaPredicted RBP28.48■■■□□ 2.15
RAB40B-201ENST00000269347 TTLL7Q6ZT98 887 aa28.47■■■□□ 2.15
RAB40B-201ENST00000269347 TNS2Q63HR2 1409 aa28.47■■■□□ 2.15
RAB40B-201ENST00000269347 KIF1BPQ96EK5 621 aa28.47■■■□□ 2.15
RAB40B-201ENST00000269347 COL14A1Q05707 1796 aaKnown RBP28.46■■■□□ 2.15
RAB40B-201ENST00000269347 COL22A1Q8NFW1 1626 aaPredicted RBP28.46■■■□□ 2.15
RAB40B-201ENST00000269347 ITGB4P16144 1822 aa28.46■■■□□ 2.15
RAB40B-201ENST00000269347 SNX21Q969T3 373 aa28.45■■■□□ 2.15
RAB40B-201ENST00000269347 RILPL2Q969X0 211 aa28.45■■■□□ 2.15
RAB40B-201ENST00000269347 DISP2A7MBM2 1401 aa28.45■■■□□ 2.14
RAB40B-201ENST00000269347 NUP188Q5SRE5 1749 aa28.45■■■□□ 2.14
RAB40B-201ENST00000269347 AK9Q5TCS8 1911 aa28.44■■■□□ 2.14
RAB40B-201ENST00000269347 TRIM6-TRIM34B2RNG4 842 aa28.44■■■□□ 2.14
RAB40B-201ENST00000269347 SASH1O94885 1247 aa28.43■■■□□ 2.14
RAB40B-201ENST00000269347 ASAP1Q9ULH1 1129 aa28.43■■■□□ 2.14
RAB40B-201ENST00000269347 KAT6BQ8WYB5 2073 aa28.43■■■□□ 2.14
RAB40B-201ENST00000269347 CHMLP26374 656 aa28.43■■■□□ 2.14
RAB40B-201ENST00000269347 HSCBQ8IWL3 235 aa28.42■■■□□ 2.14
RAB40B-201ENST00000269347 PIGBQ92521 554 aa28.42■■■□□ 2.14
RAB40B-201ENST00000269347 NEXNQ0ZGT2 675 aa28.41■■■□□ 2.14
RAB40B-201ENST00000269347 ESYT1Q9BSJ8 1104 aa28.4■■■□□ 2.14
RAB40B-201ENST00000269347 ERC2O15083 957 aa28.4■■■□□ 2.14
RAB40B-201ENST00000269347 OS9Q13438 667 aaPredicted RBP28.4■■■□□ 2.14
RAB40B-201ENST00000269347 SIL1Q9H173 461 aa28.4■■■□□ 2.14
RAB40B-201ENST00000269347 CASP7P55210 303 aa28.39■■■□□ 2.14
RAB40B-201ENST00000269347 PLBD2Q8NHP8 589 aa28.39■■■□□ 2.14
RAB40B-201ENST00000269347 AOX1Q06278 1338 aa28.38■■■□□ 2.13
RAB40B-201ENST00000269347 TJP1Q07157 1748 aa28.38■■■□□ 2.13
RAB40B-201ENST00000269347 UBE3BQ7Z3V4 1068 aa28.38■■■□□ 2.13
RAB40B-201ENST00000269347 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.38■■■□□ 2.13
RAB40B-201ENST00000269347 DDIT3P35638 169 aa28.38■■■□□ 2.13
RAB40B-201ENST00000269347 TLR7Q9NYK1 1049 aaKnown RBP28.37■■■□□ 2.13
RAB40B-201ENST00000269347 TMOD3Q9NYL9 352 aa28.37■■■□□ 2.13
RAB40B-201ENST00000269347 PLCH1Q4KWH8 1693 aa28.36■■■□□ 2.13
RAB40B-201ENST00000269347 FOXD4L1Q9NU39 408 aa28.36■■■□□ 2.13
RAB40B-201ENST00000269347 WNK3Q9BYP7 1800 aa28.36■■■□□ 2.13
RAB40B-201ENST00000269347 ADAMTS2O95450 1211 aa28.35■■■□□ 2.13
RAB40B-201ENST00000269347 RFX5P48382 616 aaPredicted RBP28.35■■■□□ 2.13
RAB40B-201ENST00000269347 CASC1Q6TDU7 716 aa28.35■■■□□ 2.13
RAB40B-201ENST00000269347 EAF2Q96CJ1 260 aaPredicted RBP28.35■■■□□ 2.13
RAB40B-201ENST00000269347 ZBTB3Q9H5J0 574 aa28.35■■■□□ 2.13
RAB40B-201ENST00000269347 ATG3Q9NT62 314 aa28.35■■■□□ 2.13
RAB40B-201ENST00000269347 USP42Q9H9J4 1324 aaKnown RBP28.35■■■□□ 2.13
RAB40B-201ENST00000269347 SLC4A9Q96Q91 983 aa28.35■■■□□ 2.13
RAB40B-201ENST00000269347 PHLPP1O60346 1717 aa28.35■■■□□ 2.13
RAB40B-201ENST00000269347 HSP90AB4PQ58FF6 505 aa28.34■■■□□ 2.13
RAB40B-201ENST00000269347 PALD1Q9ULE6 856 aa28.34■■■□□ 2.13
RAB40B-201ENST00000269347 A0A087WZG4 1122 aa28.34■■■□□ 2.13
RAB40B-201ENST00000269347 DNAJC10Q8IXB1 793 aa28.34■■■□□ 2.13
RAB40B-201ENST00000269347 ERBB4Q15303 1308 aa28.33■■■□□ 2.13
RAB40B-201ENST00000269347 CCDC8Q9H0W5 538 aaPredicted RBP28.32■■■□□ 2.12
RAB40B-201ENST00000269347 REC8O95072 547 aa28.31■■■□□ 2.12
RAB40B-201ENST00000269347 K7ELQ4 463 aaPredicted RBP28.31■■■□□ 2.12
RAB40B-201ENST00000269347 AACSQ86V21 672 aa28.31■■■□□ 2.12
RAB40B-201ENST00000269347 CLASRPQ8N2M8 674 aaKnown RBP28.31■■■□□ 2.12
RAB40B-201ENST00000269347 NRAPQ86VF7 1730 aa28.31■■■□□ 2.12
RAB40B-201ENST00000269347 PTPN12Q05209 780 aaKnown RBP28.3■■■□□ 2.12
RAB40B-201ENST00000269347 RABL6Q3YEC7 729 aaPredicted RBP28.3■■■□□ 2.12
RAB40B-201ENST00000269347 FOXO4P98177 505 aa28.28■■■□□ 2.12
RAB40B-201ENST00000269347 RABEP1Q15276 862 aa28.28■■■□□ 2.12
RAB40B-201ENST00000269347 G3BP1Q13283 466 aaKnown RBP eCLIP28.28■■■□□ 2.12
RAB40B-201ENST00000269347 BCL9O00512 1426 aa28.28■■■□□ 2.12
RAB40B-201ENST00000269347 H7C1W4 665 aa28.27■■■□□ 2.12
RAB40B-201ENST00000269347 ANO2Q9NQ90 1003 aa28.27■■■□□ 2.12
RAB40B-201ENST00000269347 HDAC5Q9UQL6 1122 aa28.27■■■□□ 2.12
RAB40B-201ENST00000269347 ZNF330Q9Y3S2 320 aaPredicted RBP28.27■■■□□ 2.12
RAB40B-201ENST00000269347 TTC41PQ6P2S7 1318 aa28.27■■■□□ 2.12
RAB40B-201ENST00000269347 PIP4K2BP78356 416 aa28.26■■■□□ 2.11
RAB40B-201ENST00000269347 ERC1Q8IUD2 1116 aa28.26■■■□□ 2.11
RAB40B-201ENST00000269347 ECHDC1Q9NTX5 307 aa28.26■■■□□ 2.11
RAB40B-201ENST00000269347 CHMP5Q9NZZ3 219 aa28.26■■■□□ 2.11
RAB40B-201ENST00000269347 DOT1LQ8TEK3 1739 aa28.25■■■□□ 2.11
RAB40B-201ENST00000269347 IFIT2P09913 472 aaKnown RBP28.25■■■□□ 2.11
RAB40B-201ENST00000269347 LMBR1LQ6UX01 489 aa28.25■■■□□ 2.11
RAB40B-201ENST00000269347 COPRSQ9NQ92 184 aa28.25■■■□□ 2.11
RAB40B-201ENST00000269347 COL15A1P39059 1388 aa28.24■■■□□ 2.11
RAB40B-201ENST00000269347 NUTM2BA6NNL0 878 aaPredicted RBP28.24■■■□□ 2.11
RAB40B-201ENST00000269347 NUTM2EB1AL46 878 aaPredicted RBP28.24■■■□□ 2.11
RAB40B-201ENST00000269347 NUTM2AQ8IVF1 878 aaPredicted RBP28.24■■■□□ 2.11
RAB40B-201ENST00000269347 EXOC5O00471 708 aa28.23■■■□□ 2.11
RAB40B-201ENST00000269347 GLRX3O76003 335 aaKnown RBP28.23■■■□□ 2.11
RAB40B-201ENST00000269347 SYTL4Q96C24 671 aaPredicted RBP28.23■■■□□ 2.11
RAB40B-201ENST00000269347 SGSM2O43147 1006 aa28.22■■■□□ 2.11
RAB40B-201ENST00000269347 CWC25Q9NXE8 425 aaPredicted RBP28.22■■■□□ 2.11
RAB40B-201ENST00000269347 SPATA31A1Q5TZJ5 1347 aa28.22■■■□□ 2.11
RAB40B-201ENST00000269347 TFCP2Q12800 502 aa28.21■■■□□ 2.11
RAB40B-201ENST00000269347 CNTROBQ8N137 903 aa28.21■■■□□ 2.11
RAB40B-201ENST00000269347 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
RAB40B-201ENST00000269347 CWC27Q6UX04 472 aaKnown RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms