RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 CEP135Q66GS9 1140 aa18.29■□□□□ 0.52
SCAMP2-201ENST00000268099 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
SCAMP2-201ENST00000268099 KRT222Q8N1A0 295 aa18.29■□□□□ 0.52
SCAMP2-201ENST00000268099 TDRD7Q8NHU6 1098 aaKnown RBP18.29■□□□□ 0.52
SCAMP2-201ENST00000268099 CACTINQ8WUQ7 758 aaKnown RBP18.29■□□□□ 0.52
SCAMP2-201ENST00000268099 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
SCAMP2-201ENST00000268099 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
SCAMP2-201ENST00000268099 CWC27Q6UX04 472 aaKnown RBP18.29■□□□□ 0.52
SCAMP2-201ENST00000268099 DIP2CQ9Y2E4 1556 aa18.29■□□□□ 0.52
SCAMP2-201ENST00000268099 AKAP12Q02952 1782 aa18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 ZNF397Q8NF99 534 aaPredicted RBP18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 DACT1Q9NYF0 836 aa18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 RGPD1P0DJD0 1748 aa18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 ITSN1Q15811 1721 aa18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 RAB11FIP3O75154 756 aa18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 SSH3Q8TE77 659 aa18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 ZNF592Q92610 1267 aa18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 JAKMIP1Q96N16 626 aaKnown RBP18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 CLIP2Q9UDT6 1046 aa18.28■□□□□ 0.52
SCAMP2-201ENST00000268099 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.52
SCAMP2-201ENST00000268099 RAPGEF3O95398 923 aa18.27■□□□□ 0.52
SCAMP2-201ENST00000268099 CCDC171Q6TFL3 1326 aa18.27■□□□□ 0.52
SCAMP2-201ENST00000268099 TTC21AQ8NDW8 1320 aa18.27■□□□□ 0.52
SCAMP2-201ENST00000268099 CCDC66A2RUB6 948 aa18.27■□□□□ 0.51
SCAMP2-201ENST00000268099 ME3Q16798 604 aa18.27■□□□□ 0.51
SCAMP2-201ENST00000268099 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.51
SCAMP2-201ENST00000268099 KMT5BQ4FZB7 885 aa18.27■□□□□ 0.51
SCAMP2-201ENST00000268099 RBM43Q6ZSC3 357 aaKnown RBP18.27■□□□□ 0.51
SCAMP2-201ENST00000268099 FOXO3O43524 673 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 CCDC144BQ3MJ40 725 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 LARP1BQ659C4 914 aaKnown RBP18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 CDC37L1Q7L3B6 337 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 CCDC144CPQ8IYA2 1237 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 ZSWIM6Q9HCJ5 1215 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 DDX19AQ9NUU7 478 aaKnown RBP18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 CYP46A1Q9Y6A2 500 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 SURF6O75683 361 aaKnown RBP18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 FAM173BQ6P4H8 233 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 NECAB1Q8N987 351 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 RHPN1Q8TCX5 695 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 NUDT16Q96DE0 195 aaKnown RBP18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 TM6SF1Q9BZW5 370 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 USP44Q9H0E7 712 aa18.26■□□□□ 0.51
SCAMP2-201ENST00000268099 CACNA1FO60840 1977 aa18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 CHD2O14647 1828 aaKnown RBP18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 SETD1AO15047 1707 aaKnown RBP18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 CDC25BP30305 580 aa18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 CLSTN2Q9H4D0 955 aa18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 ZBTB22O15209 634 aa18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 ZNF165P49910 485 aa18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 BCL11BQ9C0K0 894 aaPredicted RBP18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 ZNF215Q9UL58 517 aaPredicted RBP18.25■□□□□ 0.51
SCAMP2-201ENST00000268099 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 PRPF40BQ6NWY9 871 aaKnown RBP18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 FAM53CQ9NYF3 392 aa18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 RIMS1Q86UR5 1692 aaKnown RBP18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 NPHP3Q7Z494 1330 aa18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 PTH1RQ03431 593 aa18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 FBXO31Q5XUX0 539 aaPredicted RBP18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 SCAND2PQ9GZW5 306 aaPredicted RBP18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 DNAJC25Q9H1X3 360 aa18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 PXDNLA1KZ92 1463 aa18.24■□□□□ 0.51
SCAMP2-201ENST00000268099 HSP90AB2PQ58FF8 381 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 LRRC8AQ8IWT6 810 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 KIF1BPQ96EK5 621 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 SPATA32Q96LK8 384 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 CCDC61Q9Y6R9 512 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 PEAK1Q9H792 1746 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 USP27XA6NNY8 438 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 POLA2Q14181 598 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
SCAMP2-201ENST00000268099 PDCP20941 246 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 KCNJ4P48050 445 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 RBM6P78332 1123 aaKnown RBP18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 PTPN14Q15678 1187 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 NYAP1Q6ZVC0 841 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 KCNB2Q92953 911 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 STAG3Q9UJ98 1225 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 TPCN1Q9ULQ1 816 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 V9GYY5 206 aaPredicted RBP18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 FBXO38Q6PIJ6 1188 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 SPATA31D1Q6ZQQ2 1576 aa18.22■□□□□ 0.51
SCAMP2-201ENST00000268099 MAP3K5Q99683 1374 aa18.21■□□□□ 0.51
SCAMP2-201ENST00000268099 NEMFO60524 1076 aa18.21■□□□□ 0.51
SCAMP2-201ENST00000268099 ERO1AQ96HE7 468 aa18.21■□□□□ 0.51
SCAMP2-201ENST00000268099 ADGRL3Q9HAR2 1447 aa18.21■□□□□ 0.51
SCAMP2-201ENST00000268099 IRX5P78411 483 aaPredicted RBP18.21■□□□□ 0.5
SCAMP2-201ENST00000268099 SLFNL1Q499Z3 407 aa18.21■□□□□ 0.5
SCAMP2-201ENST00000268099 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.5
SCAMP2-201ENST00000268099 LEO1Q8WVC0 666 aaPredicted RBP18.21■□□□□ 0.5
SCAMP2-201ENST00000268099 TFIP11Q9UBB9 837 aaKnown RBP18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms