RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SRGAP3O43295 1099 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 SLF2Q8IX21 1173 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 RNF168Q8IYW5 571 aaPredicted RBP13.87□□□□□ -0.19
SRRM4-201ENST00000267260 LUC7L2Q9Y383 392 aaKnown RBP13.87□□□□□ -0.19
SRRM4-201ENST00000267260 SLU7O95391 586 aaKnown RBP13.87□□□□□ -0.19
SRRM4-201ENST00000267260 NOP2P46087 812 aaKnown RBP13.87□□□□□ -0.19
SRRM4-201ENST00000267260 TRMT1Q9NXH9 659 aaKnown RBP13.87□□□□□ -0.19
SRRM4-201ENST00000267260 ZNF652Q9Y2D9 606 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 AKNAQ7Z591 1439 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 PRKAR2BP31323 418 aa13.86□□□□□ -0.19
SRRM4-201ENST00000267260 SSRP1Q08945 709 aaKnown RBP13.86□□□□□ -0.19
SRRM4-201ENST00000267260 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
SRRM4-201ENST00000267260 GLRX3O76003 335 aaKnown RBP13.86□□□□□ -0.19
SRRM4-201ENST00000267260 ZBTB16Q05516 673 aa13.86□□□□□ -0.19
SRRM4-201ENST00000267260 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
SRRM4-201ENST00000267260 CCDC174Q6PII3 467 aa13.86□□□□□ -0.19
SRRM4-201ENST00000267260 CTCFLQ8NI51 663 aaPredicted RBP13.86□□□□□ -0.19
SRRM4-201ENST00000267260 PRPF4BQ13523 1007 aaKnown RBP13.86□□□□□ -0.19
SRRM4-201ENST00000267260 TMEM87AQ8NBN3 555 aa13.86□□□□□ -0.19
SRRM4-201ENST00000267260 MRPS9P82933 396 aaKnown RBP13.86□□□□□ -0.19
SRRM4-201ENST00000267260 TDRD9Q8NDG6 1382 aaKnown RBP13.86□□□□□ -0.19
SRRM4-201ENST00000267260 TUBB4AP04350 444 aa13.86□□□□□ -0.19
SRRM4-201ENST00000267260 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
SRRM4-201ENST00000267260 USP37Q86T82 979 aa13.86□□□□□ -0.19
SRRM4-201ENST00000267260 RNF41Q9H4P4 317 aaPredicted RBP13.86□□□□□ -0.19
SRRM4-201ENST00000267260 TCP11L1Q9NUJ3 509 aa13.86□□□□□ -0.19
SRRM4-201ENST00000267260 GBP7Q8N8V2 638 aaPredicted RBP13.85□□□□□ -0.19
SRRM4-201ENST00000267260 JAKMIP2Q96AA8 810 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 LACTBP83111 547 aaPredicted RBP13.85□□□□□ -0.19
SRRM4-201ENST00000267260 ATP11AP98196 1134 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 UBA5Q9GZZ9 404 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 MKNK2Q9HBH9 465 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 RMND1Q9NWS8 449 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 JPH4Q96JJ6 628 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
SRRM4-201ENST00000267260 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
SRRM4-201ENST00000267260 RASSF4Q9H2L5 321 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 ATP2A1O14983 1001 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 CAPN2P17655 700 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 EXOSC9Q06265 439 aaKnown RBP13.85□□□□□ -0.19
SRRM4-201ENST00000267260 UVSSAQ2YD98 709 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.85□□□□□ -0.19
SRRM4-201ENST00000267260 SF3B2Q13435 895 aaKnown RBP13.85□□□□□ -0.19
SRRM4-201ENST00000267260 ATRIPQ8WXE1 791 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 ODF2LQ9ULJ1 636 aa13.85□□□□□ -0.19
SRRM4-201ENST00000267260 CATIPQ7Z7H3 387 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 MPHOSPH6Q99547 160 aaKnown RBP13.84□□□□□ -0.19
SRRM4-201ENST00000267260 DHX29Q7Z478 1369 aaKnown RBP13.84□□□□□ -0.19
SRRM4-201ENST00000267260 CAVIN4Q5BKX8 364 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 STMN2Q93045 179 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 CCDC77Q9BR77 488 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 NAPBQ9H115 298 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 VCX3BQ9H321 246 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 CCDC14Q49A88 953 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 USH1CQ9Y6N9 552 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 SLC12A7Q9Y666 1083 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 NKTRP30414 1462 aaKnown RBP13.84□□□□□ -0.19
SRRM4-201ENST00000267260 FAM177BA6PVY3 158 aa13.84□□□□□ -0.19
SRRM4-201ENST00000267260 CCDC114Q96M63 670 aa13.83□□□□□ -0.19
SRRM4-201ENST00000267260 GGNBP2Q9H3C7 697 aa13.83□□□□□ -0.19
SRRM4-201ENST00000267260 CTAGE9A4FU28 777 aa13.83□□□□□ -0.19
SRRM4-201ENST00000267260 BTBD11A6QL63 1104 aa13.83□□□□□ -0.19
SRRM4-201ENST00000267260 DZIP1Q86YF9 867 aaKnown RBP13.83□□□□□ -0.19
SRRM4-201ENST00000267260 CCDC50Q8IVM0 306 aa13.83□□□□□ -0.19
SRRM4-201ENST00000267260 CACNA2D3Q8IZS8 1091 aa13.83□□□□□ -0.19
SRRM4-201ENST00000267260 PPFIBP2Q8ND30 876 aa13.83□□□□□ -0.19
SRRM4-201ENST00000267260 CASQ2O14958 399 aaPredicted RBP13.83□□□□□ -0.2
SRRM4-201ENST00000267260 TMC6Q7Z403 805 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 LMNTD2Q8IXW0 634 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 SRRTQ9BXP5 876 aaKnown RBP13.83□□□□□ -0.2
SRRM4-201ENST00000267260 A0A1B0GUL7 405 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 ZNF853P0CG23 659 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 SH2D4BQ5SQS7 431 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 CABP2Q9NPB3 220 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 PTPRGP23470 1445 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 ADCY5O95622 1261 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 RPAP2Q8IXW5 612 aaPredicted RBP13.83□□□□□ -0.2
SRRM4-201ENST00000267260 CEP128Q6ZU80 1094 aa13.83□□□□□ -0.2
SRRM4-201ENST00000267260 MYL6BP14649 208 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 LIG1P18858 919 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 RABGAP1Q9Y3P9 1069 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 GMNNO75496 209 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 PHF23Q9BUL5 403 aaPredicted RBP13.82□□□□□ -0.2
SRRM4-201ENST00000267260 UBE2HP62256 183 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 SETDB1Q15047 1291 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 CCDC96Q2M329 555 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 SYCP3Q8IZU3 236 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 ARID4AP29374 1257 aaPredicted RBP13.82□□□□□ -0.2
SRRM4-201ENST00000267260 IFT74Q96LB3 600 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 GBP1P32455 592 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 KIAA1524Q8TCG1 905 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 PSMD1Q99460 953 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 HFM1A2PYH4 1435 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 CIB2O75838 187 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 SMC1BQ8NDV3 1235 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms