RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 DDX21Q9NR30 783 aaKnown RBP eCLIP10.94□□□□□ -0.66
ERCC8-201ENST00000265038 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
ERCC8-201ENST00000265038 SETDB2Q96T68 719 aa10.93□□□□□ -0.66
ERCC8-201ENST00000265038 CHPF2Q9P2E5 772 aa10.93□□□□□ -0.66
ERCC8-201ENST00000265038 MAP3K15Q6ZN16 1313 aa10.93□□□□□ -0.66
ERCC8-201ENST00000265038 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 DPEP1P16444 411 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 YBX3P16989 372 aaKnown RBP eCLIP10.92□□□□□ -0.66
ERCC8-201ENST00000265038 GPR162Q16538 588 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 ZNF652Q9Y2D9 606 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 ZNF521Q96K83 1311 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 KCNA3P22001 575 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 KIF6Q6ZMV9 814 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 COPS6Q7L5N1 327 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
ERCC8-201ENST00000265038 XAGE3Q8WTP9 111 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 ZBTB3Q9H5J0 574 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 DBF4Q9UBU7 674 aaPredicted RBP10.92□□□□□ -0.66
ERCC8-201ENST00000265038 WWC3Q9ULE0 1092 aa10.92□□□□□ -0.66
ERCC8-201ENST00000265038 PXDNLA1KZ92 1463 aa10.91□□□□□ -0.66
ERCC8-201ENST00000265038 CARMIL3Q8ND23 1372 aa10.91□□□□□ -0.66
ERCC8-201ENST00000265038 FANCIQ9NVI1 1328 aa10.91□□□□□ -0.66
ERCC8-201ENST00000265038 AIMP1Q12904 312 aaKnown RBP10.91□□□□□ -0.66
ERCC8-201ENST00000265038 PRR5LQ6MZQ0 368 aa10.91□□□□□ -0.66
ERCC8-201ENST00000265038 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
ERCC8-201ENST00000265038 NIP7Q9Y221 180 aaKnown RBP eCLIP10.91□□□□□ -0.66
ERCC8-201ENST00000265038 CHRNA5P30532 468 aa10.91□□□□□ -0.66
ERCC8-201ENST00000265038 GIGYF2Q6Y7W6 1299 aaKnown RBP10.91□□□□□ -0.66
ERCC8-201ENST00000265038 PIAS4Q8N2W9 510 aaPredicted RBP10.9□□□□□ -0.66
ERCC8-201ENST00000265038 LAMB4A4D0S4 1761 aa10.9□□□□□ -0.67
ERCC8-201ENST00000265038 TWISTNBQ3B726 338 aaPredicted RBP10.89□□□□□ -0.67
ERCC8-201ENST00000265038 ZNF34Q8IZ26 560 aa10.89□□□□□ -0.67
ERCC8-201ENST00000265038 HYPKQ9NX55 129 aa10.89□□□□□ -0.67
ERCC8-201ENST00000265038 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
ERCC8-201ENST00000265038 FAM177BA6PVY3 158 aa10.89□□□□□ -0.67
ERCC8-201ENST00000265038 EXOSC9Q06265 439 aaKnown RBP10.89□□□□□ -0.67
ERCC8-201ENST00000265038 GOLGA2Q08379 1002 aa10.89□□□□□ -0.67
ERCC8-201ENST00000265038 CCDC30Q5VVM6 783 aa10.89□□□□□ -0.67
ERCC8-201ENST00000265038 NBPF5PQ86XG9 351 aaPredicted RBP10.89□□□□□ -0.67
ERCC8-201ENST00000265038 CNBD1Q8NA66 436 aa10.89□□□□□ -0.67
ERCC8-201ENST00000265038 BRIP1Q9BX63 1249 aa10.89□□□□□ -0.67
ERCC8-201ENST00000265038 PHAXQ9H814 394 aaKnown RBP10.89□□□□□ -0.67
ERCC8-201ENST00000265038 UBN2Q6ZU65 1347 aa10.88□□□□□ -0.67
ERCC8-201ENST00000265038 VAMP4O75379 141 aa10.88□□□□□ -0.67
ERCC8-201ENST00000265038 GPTP24298 496 aa10.88□□□□□ -0.67
ERCC8-201ENST00000265038 TPTE2Q6XPS3 522 aa10.88□□□□□ -0.67
ERCC8-201ENST00000265038 MYH16Q9H6N6 1097 aa10.88□□□□□ -0.67
ERCC8-201ENST00000265038 ATP10DQ9P241 1426 aa10.88□□□□□ -0.67
ERCC8-201ENST00000265038 TCERG1O14776 1098 aaKnown RBP10.87□□□□□ -0.67
ERCC8-201ENST00000265038 GRIN3BO60391 1043 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 SUSD4Q5VX71 490 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 PPP4R3CPQ6ZMV5 832 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 ANKRD13DQ6ZTN6 518 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 PLBD2Q8NHP8 589 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 PIM2Q9P1W9 311 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 ST5P78524 1137 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 TCIRG1Q13488 830 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 C2CD5Q86YS7 1000 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 CHMP4AQ9BY43 222 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 BCS1LQ9Y276 419 aa10.87□□□□□ -0.67
ERCC8-201ENST00000265038 NRXN2Q9P2S2 1712 aa10.86□□□□□ -0.67
ERCC8-201ENST00000265038 NPHP1O15259 732 aa10.86□□□□□ -0.67
ERCC8-201ENST00000265038 PDE6BP35913 854 aa10.86□□□□□ -0.67
ERCC8-201ENST00000265038 H0YIN7 160 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 PARP10Q53GL7 1025 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 NUTM1Q86Y26 1132 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 BCORQ6W2J9 1755 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 KLRG2A4D1S0 409 aaPredicted RBP10.85□□□□□ -0.67
ERCC8-201ENST00000265038 NTSR2O95665 410 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 SLFN5Q08AF3 891 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 ERFEQ4G0M1 354 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 HSP90AB3PQ58FF7 597 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 DALRD3Q5D0E6 543 aaKnown RBP10.85□□□□□ -0.67
ERCC8-201ENST00000265038 NLRP10Q86W26 655 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 CDCA7LQ96GN5 454 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 NYXQ9GZU5 481 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 KIF13BQ9NQT8 1826 aa10.85□□□□□ -0.67
ERCC8-201ENST00000265038 KIAA1551Q9HCM1 1747 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 E9PSI1 815 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 SRGNP10124 158 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
ERCC8-201ENST00000265038 G2E3Q7L622 706 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 ISCA1Q9BUE6 129 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 STK31Q9BXU1 1019 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 PDZRN3Q9UPQ7 1066 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 ABCC12Q96J65 1359 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 IBTKQ9P2D0 1353 aaPredicted RBP10.84□□□□□ -0.67
ERCC8-201ENST00000265038 PPP1R42Q7Z4L9 355 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 RIC3Q7Z5B4 369 aa10.84□□□□□ -0.67
ERCC8-201ENST00000265038 ZNF622Q969S3 477 aaKnown RBP eCLIP10.84□□□□□ -0.67
ERCC8-201ENST00000265038 UTP14AQ9BVJ6 771 aaKnown RBP10.84□□□□□ -0.67
ERCC8-201ENST00000265038 ATP5J2-PTCD1G3V325 749 aa10.83□□□□□ -0.68
ERCC8-201ENST00000265038 YY1P25490 414 aa10.83□□□□□ -0.68
ERCC8-201ENST00000265038 TRMT2AQ8IZ69 625 aaKnown RBP10.83□□□□□ -0.68
ERCC8-201ENST00000265038 TTLL6Q8N841 843 aa10.83□□□□□ -0.68
ERCC8-201ENST00000265038 ZNF428Q96B54 188 aa10.83□□□□□ -0.68
ERCC8-201ENST00000265038 SLC10A5Q5PT55 438 aa10.82□□□□□ -0.68
ERCC8-201ENST00000265038 STYK1Q6J9G0 422 aa10.82□□□□□ -0.68
ERCC8-201ENST00000265038 SYNE4Q8N205 404 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms