RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
PDCD6-201ENST00000264933 TTLL7Q6ZT98 887 aa17.24■□□□□ 0.35
PDCD6-201ENST00000264933 PHAXQ9H814 394 aaKnown RBP17.24■□□□□ 0.35
PDCD6-201ENST00000264933 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
PDCD6-201ENST00000264933 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
PDCD6-201ENST00000264933 CT47B1P0C2W7 299 aaPredicted RBP17.23■□□□□ 0.35
PDCD6-201ENST00000264933 G2E3Q7L622 706 aa17.23■□□□□ 0.35
PDCD6-201ENST00000264933 SRP68Q9UHB9 627 aaKnown RBP17.23■□□□□ 0.35
PDCD6-201ENST00000264933 NARFQ9UHQ1 456 aa17.23■□□□□ 0.35
PDCD6-201ENST00000264933 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
PDCD6-201ENST00000264933 MMP10P09238 476 aa17.22■□□□□ 0.35
PDCD6-201ENST00000264933 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
PDCD6-201ENST00000264933 KIAA1551Q9HCM1 1747 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 ADCY9O60503 1353 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 C1QTNF8P60827 252 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 COPS6Q7L5N1 327 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
PDCD6-201ENST00000264933 XAGE3Q8WTP9 111 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 ZNF428Q96B54 188 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
PDCD6-201ENST00000264933 ARFGEF2Q9Y6D5 1785 aa17.2■□□□□ 0.34
PDCD6-201ENST00000264933 PXDNLA1KZ92 1463 aa17.2■□□□□ 0.34
PDCD6-201ENST00000264933 A0A087WZG4 1122 aa17.2■□□□□ 0.34
PDCD6-201ENST00000264933 GYS1P13807 737 aa17.2■□□□□ 0.34
PDCD6-201ENST00000264933 RFC4P35249 363 aa17.2■□□□□ 0.34
PDCD6-201ENST00000264933 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
PDCD6-201ENST00000264933 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
PDCD6-201ENST00000264933 CHMP4AQ9BY43 222 aa17.2■□□□□ 0.34
PDCD6-201ENST00000264933 WWC3Q9ULE0 1092 aa17.2■□□□□ 0.34
PDCD6-201ENST00000264933 ZNF330Q9Y3S2 320 aaPredicted RBP17.2■□□□□ 0.34
PDCD6-201ENST00000264933 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
PDCD6-201ENST00000264933 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
PDCD6-201ENST00000264933 HLFQ16534 295 aa17.19■□□□□ 0.34
PDCD6-201ENST00000264933 USPL1Q5W0Q7 1092 aa17.19■□□□□ 0.34
PDCD6-201ENST00000264933 C10orf71Q711Q0 1435 aa17.19■□□□□ 0.34
PDCD6-201ENST00000264933 KIF13BQ9NQT8 1826 aa17.19■□□□□ 0.34
PDCD6-201ENST00000264933 AIMP1Q12904 312 aaKnown RBP17.18■□□□□ 0.34
PDCD6-201ENST00000264933 AFDNP55196 1824 aaKnown RBP17.18■□□□□ 0.34
PDCD6-201ENST00000264933 ATP10DQ9P241 1426 aa17.18■□□□□ 0.34
PDCD6-201ENST00000264933 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
PDCD6-201ENST00000264933 ERVV-1B6SEH8 477 aa17.17■□□□□ 0.34
PDCD6-201ENST00000264933 BRPF1P55201 1214 aaPredicted RBP17.17■□□□□ 0.34
PDCD6-201ENST00000264933 FKBP8Q14318 412 aa17.17■□□□□ 0.34
PDCD6-201ENST00000264933 STK31Q9BXU1 1019 aa17.17■□□□□ 0.34
PDCD6-201ENST00000264933 TM4SF1P30408 202 aa17.16■□□□□ 0.34
PDCD6-201ENST00000264933 NLGN1Q8N2Q7 840 aa17.16■□□□□ 0.34
PDCD6-201ENST00000264933 RGL2O15211 777 aa17.15■□□□□ 0.34
PDCD6-201ENST00000264933 ZPR1O75312 459 aa17.15■□□□□ 0.34
PDCD6-201ENST00000264933 BCAR3O75815 825 aa17.15■□□□□ 0.34
PDCD6-201ENST00000264933 FLIIQ13045 1269 aa17.15■□□□□ 0.34
PDCD6-201ENST00000264933 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
PDCD6-201ENST00000264933 BCL2L13Q9BXK5 485 aa17.15■□□□□ 0.34
PDCD6-201ENST00000264933 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
PDCD6-201ENST00000264933 CEP350Q5VT06 3117 aa17.14■□□□□ 0.34
PDCD6-201ENST00000264933 NRXN2Q9P2S2 1712 aa17.14■□□□□ 0.33
PDCD6-201ENST00000264933 TBC1D9BQ66K14 1250 aa17.14■□□□□ 0.33
PDCD6-201ENST00000264933 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
PDCD6-201ENST00000264933 GIGYF2Q6Y7W6 1299 aaKnown RBP17.14■□□□□ 0.33
PDCD6-201ENST00000264933 PLBD2Q8NHP8 589 aa17.14■□□□□ 0.33
PDCD6-201ENST00000264933 KIF6Q6ZMV9 814 aa17.13■□□□□ 0.33
PDCD6-201ENST00000264933 NPM2Q86SE8 214 aaKnown RBP17.13■□□□□ 0.33
PDCD6-201ENST00000264933 NFIXQ14938 502 aa17.12■□□□□ 0.33
PDCD6-201ENST00000264933 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
PDCD6-201ENST00000264933 ZNF34Q8IZ26 560 aa17.12■□□□□ 0.33
PDCD6-201ENST00000264933 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
PDCD6-201ENST00000264933 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
PDCD6-201ENST00000264933 A0A0G2JLW4 131 aa17.11■□□□□ 0.33
PDCD6-201ENST00000264933 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
PDCD6-201ENST00000264933 TGFB2P61812 414 aa17.11■□□□□ 0.33
PDCD6-201ENST00000264933 DDR1Q08345 913 aa17.11■□□□□ 0.33
PDCD6-201ENST00000264933 TCIRG1Q13488 830 aa17.11■□□□□ 0.33
PDCD6-201ENST00000264933 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
PDCD6-201ENST00000264933 DPEP1P16444 411 aa17.1■□□□□ 0.33
PDCD6-201ENST00000264933 KCNA3P22001 575 aa17.1■□□□□ 0.33
PDCD6-201ENST00000264933 RIC3Q7Z5B4 369 aa17.1■□□□□ 0.33
PDCD6-201ENST00000264933 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
PDCD6-201ENST00000264933 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
PDCD6-201ENST00000264933 MAP3K2Q9Y2U5 619 aa17.1■□□□□ 0.33
PDCD6-201ENST00000264933 F6X3S4 739 aa17.09■□□□□ 0.33
PDCD6-201ENST00000264933 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
PDCD6-201ENST00000264933 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
PDCD6-201ENST00000264933 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
PDCD6-201ENST00000264933 UBN2Q6ZU65 1347 aa17.09■□□□□ 0.33
PDCD6-201ENST00000264933 BRCA1P38398 1863 aaKnown RBP17.09■□□□□ 0.33
PDCD6-201ENST00000264933 PTPRCP08575 1304 aa17.08■□□□□ 0.32
PDCD6-201ENST00000264933 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
PDCD6-201ENST00000264933 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.32
PDCD6-201ENST00000264933 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
PDCD6-201ENST00000264933 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
PDCD6-201ENST00000264933 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.32
PDCD6-201ENST00000264933 PARP3Q9Y6F1 533 aa17.08■□□□□ 0.32
PDCD6-201ENST00000264933 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
PDCD6-201ENST00000264933 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
PDCD6-201ENST00000264933 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
PDCD6-201ENST00000264933 DNAAF4Q8WXU2 420 aa17.07■□□□□ 0.32
PDCD6-201ENST00000264933 MYD88Q99836 296 aa17.07■□□□□ 0.32
PDCD6-201ENST00000264933 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms