RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TTC31Q49AM3 519 aaPredicted RBP13.52□□□□□ -0.25
DNMT3A-201ENST00000264709 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.25
DNMT3A-201ENST00000264709 PLEKHM2Q8IWE5 1019 aa13.52□□□□□ -0.25
DNMT3A-201ENST00000264709 PIK3R4Q99570 1358 aa13.52□□□□□ -0.25
DNMT3A-201ENST00000264709 ATP8B1O43520 1251 aa13.52□□□□□ -0.25
DNMT3A-201ENST00000264709 IQGAP3Q86VI3 1631 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 CCDC196A0A1B0GTZ2 297 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 NAP1L1P55209 391 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 LRRFIP2Q9Y608 721 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 HDXQ7Z353 690 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 NAA15Q9BXJ9 866 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 SPAG1Q07617 926 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 ECHDC1Q9NTX5 307 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 MPNDQ8N594 471 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 AACSQ86V21 672 aa13.51□□□□□ -0.25
DNMT3A-201ENST00000264709 CCDC175P0C221 793 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 MPHOSPH8Q99549 860 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 CAPN2P17655 700 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 RLBP1P12271 317 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 CTAGE9A4FU28 777 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 KIF4BQ2VIQ3 1234 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 ALS2CR12Q96Q35 445 aa13.5□□□□□ -0.25
DNMT3A-201ENST00000264709 GOLIM4O00461 696 aa13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 EPS15P42566 896 aa13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 BMP15O95972 392 aa13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 EIF2S2P20042 333 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 EZRP15311 586 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 BRPF1P55201 1214 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 B4GALNT4Q76KP1 1039 aa13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 KIAA1328Q86T90 577 aa13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 RGS12O14924 1447 aa13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 PRPF40BQ6NWY9 871 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 AEBP2Q6ZN18 517 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 SENP3Q9H4L4 574 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 BRD1O95696 1058 aa13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 TMC6Q7Z403 805 aa13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 BCL2L12Q9HB09 334 aa13.49□□□□□ -0.25
DNMT3A-201ENST00000264709 YEATS4O95619 227 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 CCAR1Q8IX12 1150 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 CNPY2Q9Y2B0 182 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 KIAA1210Q9ULL0 1709 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 GNG11P61952 73 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 ASXL2Q76L83 1435 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 HSP90AB3PQ58FF7 597 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 SPATS2Q86XZ4 545 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 PRAM1Q96QH2 718 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 CDC42BPBQ9Y5S2 1711 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 CFAP74Q9C0B2 1584 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 FSIP1Q8NA03 581 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 GIMAP6Q6P9H5 292 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 FERMT3Q86UX7 667 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 CEBPZQ03701 1054 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-201ENST00000264709 GON4LQ3T8J9 2241 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 C14orf93Q9H972 538 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 OPA1O60313 960 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 NF2P35240 595 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 CCDC69A6NI79 296 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 TMEM132EQ6IEE7 984 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 SPA17Q15506 151 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 MRFAP1L1Q96HT8 127 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 PDLIM2Q96JY6 352 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 KDM6BO15054 1643 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 NBPF11Q86T75 865 aa13.47□□□□□ -0.25
DNMT3A-201ENST00000264709 CTAGE15A4D2H0 777 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 CTAGE8P0CG41 777 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 CTAGE6Q86UF2 777 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 CCDC50Q8IVM0 306 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 CTAGE4Q8IX94 777 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 RPGRIP1Q96KN7 1286 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 ANKRD24Q8TF21 1146 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 PREX2Q70Z35 1606 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 SYT1P21579 422 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 FAM160A1Q05DH4 1040 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 USO1O60763 962 aaKnown RBP13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 MBIPQ9NS73 344 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 TET3O43151 1660 aa13.46□□□□□ -0.25
DNMT3A-201ENST00000264709 CDK19Q9BWU1 502 aa13.46□□□□□ -0.26
DNMT3A-201ENST00000264709 ATP10AO60312 1499 aa13.46□□□□□ -0.26
DNMT3A-201ENST00000264709 BRAPQ7Z569 592 aa13.46□□□□□ -0.26
DNMT3A-201ENST00000264709 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.26
DNMT3A-201ENST00000264709 MED4Q9NPJ6 270 aa13.46□□□□□ -0.26
DNMT3A-201ENST00000264709 TRPM2O94759 1503 aa13.46□□□□□ -0.26
DNMT3A-201ENST00000264709 ODF2Q5BJF6 829 aa13.46□□□□□ -0.26
DNMT3A-201ENST00000264709 DNAJC21Q5F1R6 531 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms