RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 ECHDC1Q9NTX5 307 aa17.54■□□□□ 0.4
CASC3-201ENST00000264645 ZNF75DP51815 510 aa17.54■□□□□ 0.4
CASC3-201ENST00000264645 KLHL10Q6JEL2 608 aa17.54■□□□□ 0.4
CASC3-201ENST00000264645 LIG1P18858 919 aa17.54■□□□□ 0.4
CASC3-201ENST00000264645 GIMAP7Q8NHV1 300 aa17.54■□□□□ 0.4
CASC3-201ENST00000264645 NPC1L1Q9UHC9 1359 aa17.54■□□□□ 0.4
CASC3-201ENST00000264645 POLR3DP05423 398 aaPredicted RBP17.53■□□□□ 0.4
CASC3-201ENST00000264645 PDLIM2Q96JY6 352 aa17.53■□□□□ 0.4
CASC3-201ENST00000264645 LRRC2Q9BYS8 371 aa17.53■□□□□ 0.4
CASC3-201ENST00000264645 DACH1Q9UI36 760 aa17.53■□□□□ 0.4
CASC3-201ENST00000264645 NSD2O96028 1365 aa17.53■□□□□ 0.4
CASC3-201ENST00000264645 DNAAF4Q8WXU2 420 aa17.53■□□□□ 0.4
CASC3-201ENST00000264645 SHTN1A0MZ66 631 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 UBASH3AP57075 661 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 BRF1Q92994 677 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 RAI14Q9P0K7 980 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 VPS18Q9P253 973 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 RBM8AQ9Y5S9 174 aaKnown RBP17.52■□□□□ 0.4
CASC3-201ENST00000264645 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 WAPLQ7Z5K2 1190 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 KIAA1524Q8TCG1 905 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 IFNKQ9P0W0 207 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 PALD1Q9ULE6 856 aa17.52■□□□□ 0.4
CASC3-201ENST00000264645 ZSCAN25Q6NSZ9 544 aa17.52■□□□□ 0.39
CASC3-201ENST00000264645 C8orf76Q96K31 380 aa17.52■□□□□ 0.39
CASC3-201ENST00000264645 CALRP27797 417 aaKnown RBP17.51■□□□□ 0.39
CASC3-201ENST00000264645 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
CASC3-201ENST00000264645 A2MP01023 1474 aa17.51■□□□□ 0.39
CASC3-201ENST00000264645 ERCC6LQ2NKX8 1250 aa17.51■□□□□ 0.39
CASC3-201ENST00000264645 FAM135AQ9P2D6 1515 aa17.51■□□□□ 0.39
CASC3-201ENST00000264645 ERICH2A1L162 156 aa17.5■□□□□ 0.39
CASC3-201ENST00000264645 IVLP07476 585 aa17.5■□□□□ 0.39
CASC3-201ENST00000264645 EVCP57679 992 aa17.5■□□□□ 0.39
CASC3-201ENST00000264645 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
CASC3-201ENST00000264645 C14orf93Q9H972 538 aaKnown RBP17.5■□□□□ 0.39
CASC3-201ENST00000264645 NOS1P29475 1434 aa17.5■□□□□ 0.39
CASC3-201ENST00000264645 ZNF692Q9BU19 519 aaPredicted RBP17.5■□□□□ 0.39
CASC3-201ENST00000264645 CCDC47Q96A33 483 aaKnown RBP17.49■□□□□ 0.39
CASC3-201ENST00000264645 ZSCAN16Q9H4T2 348 aaPredicted RBP17.49■□□□□ 0.39
CASC3-201ENST00000264645 KDM5CP41229 1560 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 CLSTN1O94985 981 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 CCDC181Q5TID7 509 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 EVI5LQ96CN4 794 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 SRRTQ9BXP5 876 aaKnown RBP17.49■□□□□ 0.39
CASC3-201ENST00000264645 ZNHIT6Q9NWK9 470 aaKnown RBP17.49■□□□□ 0.39
CASC3-201ENST00000264645 RTEL1-TNFRSF6BF6WH68 1400 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 TTC31Q49AM3 519 aaPredicted RBP17.49■□□□□ 0.39
CASC3-201ENST00000264645 CERS3Q8IU89 383 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 NEK11Q8NG66 645 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 NRBP1Q9UHY1 535 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 RPGRIP1LQ68CZ1 1315 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 CARD6Q9BX69 1037 aa17.49■□□□□ 0.39
CASC3-201ENST00000264645 RRP12Q5JTH9 1297 aaKnown RBP17.48■□□□□ 0.39
CASC3-201ENST00000264645 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.48■□□□□ 0.39
CASC3-201ENST00000264645 MICALL1Q8N3F8 863 aa17.48■□□□□ 0.39
CASC3-201ENST00000264645 ATP8B2P98198 1209 aa17.48■□□□□ 0.39
CASC3-201ENST00000264645 NEK1Q96PY6 1258 aa17.48■□□□□ 0.39
CASC3-201ENST00000264645 GOLGA6L9A6NEM1 432 aa17.48■□□□□ 0.39
CASC3-201ENST00000264645 MARCH6O60337 910 aa17.48■□□□□ 0.39
CASC3-201ENST00000264645 UTP14AQ9BVJ6 771 aaKnown RBP17.48■□□□□ 0.39
CASC3-201ENST00000264645 MAP9Q49MG5 647 aa17.47■□□□□ 0.39
CASC3-201ENST00000264645 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
CASC3-201ENST00000264645 ANKRD36BQ8N2N9 1353 aa17.47■□□□□ 0.39
CASC3-201ENST00000264645 CNNM3Q8NE01 707 aa17.47■□□□□ 0.39
CASC3-201ENST00000264645 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
CASC3-201ENST00000264645 CTR9Q6PD62 1173 aa17.47■□□□□ 0.39
CASC3-201ENST00000264645 NUP153P49790 1475 aaKnown RBP17.46■□□□□ 0.39
CASC3-201ENST00000264645 RAB11FIP4Q86YS3 637 aa17.46■□□□□ 0.39
CASC3-201ENST00000264645 PUF60Q9UHX1 559 aaKnown RBP17.46■□□□□ 0.39
CASC3-201ENST00000264645 RNF187Q5TA31 235 aaPredicted RBP17.46■□□□□ 0.39
CASC3-201ENST00000264645 KIAA1328Q86T90 577 aa17.46■□□□□ 0.39
CASC3-201ENST00000264645 MRPS27Q92552 414 aaKnown RBP17.46■□□□□ 0.39
CASC3-201ENST00000264645 PLCD4Q9BRC7 762 aa17.46■□□□□ 0.39
CASC3-201ENST00000264645 FAM107BQ9H098 131 aa17.46■□□□□ 0.39
CASC3-201ENST00000264645 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
CASC3-201ENST00000264645 GOLGA6L10A6NI86 522 aa17.45■□□□□ 0.38
CASC3-201ENST00000264645 KARSQ15046 597 aaKnown RBP17.45■□□□□ 0.38
CASC3-201ENST00000264645 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
CASC3-201ENST00000264645 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
CASC3-201ENST00000264645 SNX14Q9Y5W7 946 aa17.45■□□□□ 0.38
CASC3-201ENST00000264645 VPS53Q5VIR6 699 aa17.45■□□□□ 0.38
CASC3-201ENST00000264645 ANXA1P04083 346 aa17.45■□□□□ 0.38
CASC3-201ENST00000264645 GOLGA1Q92805 767 aa17.45■□□□□ 0.38
CASC3-201ENST00000264645 MAGEC2Q9UBF1 373 aaPredicted RBP17.45■□□□□ 0.38
CASC3-201ENST00000264645 GNAT3A8MTJ3 354 aa17.44■□□□□ 0.38
CASC3-201ENST00000264645 POTEB2H3BUK9 544 aa17.44■□□□□ 0.38
CASC3-201ENST00000264645 MYL6BP14649 208 aa17.44■□□□□ 0.38
CASC3-201ENST00000264645 ZSCAN20P17040 1043 aaPredicted RBP17.44■□□□□ 0.38
CASC3-201ENST00000264645 ZSCAN26Q16670 478 aa17.44■□□□□ 0.38
CASC3-201ENST00000264645 ODF2Q5BJF6 829 aa17.44■□□□□ 0.38
CASC3-201ENST00000264645 PAXIP1Q6ZW49 1069 aaPredicted RBP17.44■□□□□ 0.38
CASC3-201ENST00000264645 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
CASC3-201ENST00000264645 ZBTB22O15209 634 aa17.44■□□□□ 0.38
CASC3-201ENST00000264645 NAA30Q147X3 362 aaPredicted RBP17.44■□□□□ 0.38
CASC3-201ENST00000264645 NUDT16Q96DE0 195 aaKnown RBP17.44■□□□□ 0.38
CASC3-201ENST00000264645 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
CASC3-201ENST00000264645 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
CASC3-201ENST00000264645 MSH6P52701 1360 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 XBP1P17861 261 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 OAS2P29728 719 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms