RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 MAP3K5Q99683 1374 aa14.83□□□□□ -0.04
CHMP3-201ENST00000263856 RAB11FIP3O75154 756 aa14.83□□□□□ -0.04
CHMP3-201ENST00000263856 CWF19L2Q2TBE0 894 aaKnown RBP14.83□□□□□ -0.04
CHMP3-201ENST00000263856 CYP46A1Q9Y6A2 500 aa14.83□□□□□ -0.04
CHMP3-201ENST00000263856 NRXN3Q9Y4C0 1643 aa14.82□□□□□ -0.04
CHMP3-201ENST00000263856 EID1Q9Y6B2 187 aa14.82□□□□□ -0.04
CHMP3-201ENST00000263856 SETD1AO15047 1707 aaKnown RBP14.82□□□□□ -0.04
CHMP3-201ENST00000263856 LARP1BQ659C4 914 aaKnown RBP14.82□□□□□ -0.04
CHMP3-201ENST00000263856 FAM184AQ8NB25 1140 aa14.82□□□□□ -0.04
CHMP3-201ENST00000263856 SSH2Q76I76 1423 aa14.81□□□□□ -0.04
CHMP3-201ENST00000263856 FAM227BQ96M60 508 aa14.81□□□□□ -0.04
CHMP3-201ENST00000263856 AKAP12Q02952 1782 aa14.81□□□□□ -0.04
CHMP3-201ENST00000263856 ZKSCAN1P17029 563 aaPredicted RBP14.81□□□□□ -0.04
CHMP3-201ENST00000263856 RUFY2Q8WXA3 655 aa14.81□□□□□ -0.04
CHMP3-201ENST00000263856 BOLA2Q9H3K6 86 aa14.81□□□□□ -0.04
CHMP3-201ENST00000263856 GLRX3O76003 335 aaKnown RBP14.81□□□□□ -0.04
CHMP3-201ENST00000263856 TERF1P54274 439 aa14.81□□□□□ -0.04
CHMP3-201ENST00000263856 COL9A3Q14050 684 aaPredicted RBP14.81□□□□□ -0.04
CHMP3-201ENST00000263856 LRRC59Q96AG4 307 aaKnown RBP14.81□□□□□ -0.04
CHMP3-201ENST00000263856 TTC14Q96N46 770 aa14.81□□□□□ -0.04
CHMP3-201ENST00000263856 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
CHMP3-201ENST00000263856 TMEM2Q9UHN6 1383 aa14.81□□□□□ -0.04
CHMP3-201ENST00000263856 PPFIA3O75145 1194 aa14.8□□□□□ -0.04
CHMP3-201ENST00000263856 KDM4AO75164 1064 aa14.8□□□□□ -0.04
CHMP3-201ENST00000263856 MAP7D2Q96T17 732 aa14.8□□□□□ -0.04
CHMP3-201ENST00000263856 BTBD11A6QL63 1104 aa14.8□□□□□ -0.04
CHMP3-201ENST00000263856 CEBPZQ03701 1054 aaKnown RBP14.8□□□□□ -0.04
CHMP3-201ENST00000263856 ME3Q16798 604 aa14.8□□□□□ -0.04
CHMP3-201ENST00000263856 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
CHMP3-201ENST00000263856 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
CHMP3-201ENST00000263856 MAP3K2Q9Y2U5 619 aa14.8□□□□□ -0.04
CHMP3-201ENST00000263856 NRKQ7Z2Y5 1582 aa14.8□□□□□ -0.04
CHMP3-201ENST00000263856 CBX1P83916 185 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 PIBF1Q8WXW3 757 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 GPATCH3Q96I76 525 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 NAP1L2Q9ULW6 460 aaPredicted RBP14.79□□□□□ -0.04
CHMP3-201ENST00000263856 TTC21AQ8NDW8 1320 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 PRAMEF22A3QJZ6 481 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 ZNF530Q6P9A1 599 aaPredicted RBP14.79□□□□□ -0.04
CHMP3-201ENST00000263856 FSD1Q9BTV5 496 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 MTMR6Q9Y217 621 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 RBM8AQ9Y5S9 174 aaKnown RBP14.79□□□□□ -0.04
CHMP3-201ENST00000263856 SPATA31D1Q6ZQQ2 1576 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 CDC37L1Q7L3B6 337 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 PYCARDQ9ULZ3 195 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 PPP6R1Q9UPN7 881 aa14.79□□□□□ -0.04
CHMP3-201ENST00000263856 AP5Z1O43299 807 aa14.78□□□□□ -0.04
CHMP3-201ENST00000263856 LUZP1Q86V48 1076 aa14.78□□□□□ -0.04
CHMP3-201ENST00000263856 FBXW7Q969H0 707 aa14.78□□□□□ -0.04
CHMP3-201ENST00000263856 ECHDC1Q9NTX5 307 aa14.78□□□□□ -0.04
CHMP3-201ENST00000263856 NDUFB9Q9Y6M9 179 aa14.78□□□□□ -0.04
CHMP3-201ENST00000263856 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
CHMP3-201ENST00000263856 PROSER3Q2NL68 480 aa14.78□□□□□ -0.04
CHMP3-201ENST00000263856 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.78□□□□□ -0.04
CHMP3-201ENST00000263856 UVSSAQ2YD98 709 aa14.77□□□□□ -0.04
CHMP3-201ENST00000263856 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.04
CHMP3-201ENST00000263856 BEND3Q5T5X7 828 aa14.77□□□□□ -0.04
CHMP3-201ENST00000263856 EDC3Q96F86 508 aaKnown RBP14.77□□□□□ -0.04
CHMP3-201ENST00000263856 LETM1O95202 739 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-201ENST00000263856 CCDC192P0DO97 292 aa14.77□□□□□ -0.05
CHMP3-201ENST00000263856 HSP90B1P14625 803 aaKnown RBP14.77□□□□□ -0.05
CHMP3-201ENST00000263856 LIG1P18858 919 aa14.77□□□□□ -0.05
CHMP3-201ENST00000263856 CHAF1AQ13111 956 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-201ENST00000263856 NMIQ13287 307 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-201ENST00000263856 POLA2Q14181 598 aa14.77□□□□□ -0.05
CHMP3-201ENST00000263856 MYRIPQ8NFW9 859 aa14.77□□□□□ -0.05
CHMP3-201ENST00000263856 BICD2Q8TD16 824 aa14.77□□□□□ -0.05
CHMP3-201ENST00000263856 SIRT1Q96EB6 747 aa14.77□□□□□ -0.05
CHMP3-201ENST00000263856 ZHX1Q9UKY1 873 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-201ENST00000263856 AOX1Q06278 1338 aa14.77□□□□□ -0.05
CHMP3-201ENST00000263856 FGD1P98174 961 aa14.77□□□□□ -0.05
CHMP3-201ENST00000263856 TPCN1Q9ULQ1 816 aa14.77□□□□□ -0.05
CHMP3-201ENST00000263856 KDRP35968 1356 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 PTGS1P23219 599 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 EIF4A1P60842 406 aaKnown RBP14.76□□□□□ -0.05
CHMP3-201ENST00000263856 KRT85P78386 507 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 G3BP1Q13283 466 aaKnown RBP eCLIP14.76□□□□□ -0.05
CHMP3-201ENST00000263856 TTC6Q86TZ1 520 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 DDX11Q96FC9 970 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 NUP62CLQ9H1M0 184 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 TLR7Q9NYK1 1049 aaKnown RBP14.76□□□□□ -0.05
CHMP3-201ENST00000263856 NBPF6Q5VWK0 638 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 NBPF4Q96M43 638 aa14.76□□□□□ -0.05
CHMP3-201ENST00000263856 HTATSF1O43719 755 aaKnown RBP14.75□□□□□ -0.05
CHMP3-201ENST00000263856 KIF3AQ9Y496 699 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 TAF6LQ9Y6J9 622 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.75□□□□□ -0.05
CHMP3-201ENST00000263856 ADAMTS13Q76LX8 1427 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 MYL6BP14649 208 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 PIP4K2AP48426 406 aaPredicted RBP14.75□□□□□ -0.05
CHMP3-201ENST00000263856 LRRC2Q9BYS8 371 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 TNMDQ9H2S6 317 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 DACT1Q9NYF0 836 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 MAP3K11Q16584 847 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 BLOC1S2Q6QNY1 142 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 SPATA32Q96LK8 384 aa14.75□□□□□ -0.05
CHMP3-201ENST00000263856 TRIM5Q9C035 493 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms