RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PCDHB15Q9Y5E8 787 aa13.96□□□□□ -0.18
SMG6-201ENST00000263073 EZRP15311 586 aaKnown RBP13.96□□□□□ -0.18
SMG6-201ENST00000263073 MNAT1P51948 309 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 TERF1P54274 439 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 C8orf34Q49A92 452 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 SEC24BO95487 1268 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 DNAJC25Q9H1X3 360 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 DDX19AQ9NUU7 478 aaKnown RBP13.95□□□□□ -0.18
SMG6-201ENST00000263073 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 UBE2HP62256 183 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 BMS1Q14692 1282 aaKnown RBP13.95□□□□□ -0.18
SMG6-201ENST00000263073 GOLGA8AA7E2F4 631 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 MYO1BO43795 1136 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 YEATS4O95619 227 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
SMG6-201ENST00000263073 SKILP12757 684 aa13.94□□□□□ -0.18
SMG6-201ENST00000263073 MPRIPQ6WCQ1 1025 aa13.94□□□□□ -0.18
SMG6-201ENST00000263073 NAPBQ9H115 298 aa13.94□□□□□ -0.18
SMG6-201ENST00000263073 GOLIM4O00461 696 aa13.94□□□□□ -0.18
SMG6-201ENST00000263073 ZNF213O14771 459 aa13.94□□□□□ -0.18
SMG6-201ENST00000263073 SSRP1Q08945 709 aaKnown RBP13.94□□□□□ -0.18
SMG6-201ENST00000263073 KRT222Q8N1A0 295 aa13.94□□□□□ -0.18
SMG6-201ENST00000263073 DAPK1P53355 1430 aa13.94□□□□□ -0.18
SMG6-201ENST00000263073 PAFAH1B1P43034 410 aa13.94□□□□□ -0.18
SMG6-201ENST00000263073 MTIF2P46199 727 aaKnown RBP13.94□□□□□ -0.18
SMG6-201ENST00000263073 MMRN2Q9H8L6 949 aa13.94□□□□□ -0.18
SMG6-201ENST00000263073 ANXA1P04083 346 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 ALDH1L2Q3SY69 923 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 SDSP20132 328 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 MICU3Q86XE3 530 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 PLCD3Q8N3E9 789 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 NUTM2BA6NNL0 878 aaPredicted RBP13.93□□□□□ -0.18
SMG6-201ENST00000263073 NUTM2EB1AL46 878 aaPredicted RBP13.93□□□□□ -0.18
SMG6-201ENST00000263073 IFIT3O14879 490 aaKnown RBP13.93□□□□□ -0.18
SMG6-201ENST00000263073 GTF2A1P52655 376 aaPredicted RBP13.93□□□□□ -0.18
SMG6-201ENST00000263073 DNM1Q05193 864 aaKnown RBP13.93□□□□□ -0.18
SMG6-201ENST00000263073 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
SMG6-201ENST00000263073 DTNBO60941 627 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 GSDMDP57764 484 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 PRIMPOLQ96LW4 560 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 ZSCAN22P10073 491 aaPredicted RBP13.93□□□□□ -0.18
SMG6-201ENST00000263073 AFMP43652 599 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
SMG6-201ENST00000263073 PHACTR2O75167 634 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 PTGS1P23219 599 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 CHMP4BP1P59074 171 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 BMP2KLQ5H9B9 411 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
SMG6-201ENST00000263073 RRAGDQ9NQL2 400 aaPredicted RBP13.92□□□□□ -0.18
SMG6-201ENST00000263073 CTAGE5O15320 804 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 NOP2P46087 812 aaKnown RBP13.92□□□□□ -0.18
SMG6-201ENST00000263073 NLRP5P59047 1200 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 PLEKHH1Q9ULM0 1364 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 ZGPATQ8N5A5 531 aaKnown RBP13.92□□□□□ -0.18
SMG6-201ENST00000263073 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
SMG6-201ENST00000263073 USO1O60763 962 aaKnown RBP13.92□□□□□ -0.18
SMG6-201ENST00000263073 NF2P35240 595 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 UBASH3AP57075 661 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 PPARDQ03181 441 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 DNAJC21Q5F1R6 531 aaKnown RBP13.92□□□□□ -0.18
SMG6-201ENST00000263073 PAXBP1Q9Y5B6 917 aa13.92□□□□□ -0.18
SMG6-201ENST00000263073 MCM5P33992 734 aa13.91□□□□□ -0.18
SMG6-201ENST00000263073 TSG101Q99816 390 aa13.91□□□□□ -0.18
SMG6-201ENST00000263073 EFCAB5A4FU69 1503 aa13.91□□□□□ -0.18
SMG6-201ENST00000263073 NUDT16Q96DE0 195 aaKnown RBP13.91□□□□□ -0.18
SMG6-201ENST00000263073 VAT1LQ9HCJ6 419 aa13.91□□□□□ -0.18
SMG6-201ENST00000263073 SEC63Q9UGP8 760 aaKnown RBP13.91□□□□□ -0.18
SMG6-201ENST00000263073 DNAAF4Q8WXU2 420 aa13.91□□□□□ -0.18
SMG6-201ENST00000263073 MKNK2Q9HBH9 465 aa13.91□□□□□ -0.18
SMG6-201ENST00000263073 CCDC175P0C221 793 aa13.91□□□□□ -0.18
SMG6-201ENST00000263073 C17orf53Q8N3J3 647 aaPredicted RBP13.91□□□□□ -0.18
SMG6-201ENST00000263073 TIAM1Q13009 1591 aa13.91□□□□□ -0.18
SMG6-201ENST00000263073 MARCKSP29966 332 aaPredicted RBP13.9□□□□□ -0.18
SMG6-201ENST00000263073 SLC26A6Q9BXS9 759 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 MBIPQ9NS73 344 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 DACT1Q9NYF0 836 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 TCERG1LQ5VWI1 586 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 ATP5J2-PTCD1G3V325 749 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 NUCB1Q02818 461 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 CAPZA3Q96KX2 299 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 NEMFO60524 1076 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 IDEP14735 1019 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
SMG6-201ENST00000263073 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.18
SMG6-201ENST00000263073 MICALCLQ6ZW33 695 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 CCDC91Q7Z6B0 441 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 GTF3C6Q969F1 213 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 ORC3Q9UBD5 711 aaPredicted RBP13.9□□□□□ -0.18
SMG6-201ENST00000263073 MCM3P25205 808 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 PUF60Q9UHX1 559 aaKnown RBP13.9□□□□□ -0.18
SMG6-201ENST00000263073 MAP3K2Q9Y2U5 619 aa13.9□□□□□ -0.18
SMG6-201ENST00000263073 ZKSCAN5Q9Y2L8 839 aa13.89□□□□□ -0.19
SMG6-201ENST00000263073 NAIPQ13075 1403 aa13.89□□□□□ -0.19
SMG6-201ENST00000263073 NEBLO76041 1014 aa13.89□□□□□ -0.19
SMG6-201ENST00000263073 PPP1R42Q7Z4L9 355 aa13.89□□□□□ -0.19
SMG6-201ENST00000263073 MICALL1Q8N3F8 863 aa13.89□□□□□ -0.19
SMG6-201ENST00000263073 NEK1Q96PY6 1258 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms