RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 BRCA1P38398 1863 aaKnown RBP16.16■□□□□ 0.18
TRAF4-202ENST00000262396 GLTPD2A6NH11 291 aa16.15■□□□□ 0.18
TRAF4-202ENST00000262396 STYK1Q6J9G0 422 aa16.15■□□□□ 0.18
TRAF4-202ENST00000262396 KIF6Q6ZMV9 814 aa16.15■□□□□ 0.18
TRAF4-202ENST00000262396 TAOK3Q9H2K8 898 aa16.15■□□□□ 0.18
TRAF4-202ENST00000262396 AFDNP55196 1824 aaKnown RBP16.15■□□□□ 0.18
TRAF4-202ENST00000262396 RRP7AQ9Y3A4 280 aaKnown RBP16.14■□□□□ 0.17
TRAF4-202ENST00000262396 NFKBIEO00221 500 aa16.13■□□□□ 0.17
TRAF4-202ENST00000262396 NFE2L2Q16236 605 aa16.13■□□□□ 0.17
TRAF4-202ENST00000262396 PRPF40BQ6NWY9 871 aaKnown RBP16.13■□□□□ 0.17
TRAF4-202ENST00000262396 SRGNP10124 158 aa16.12■□□□□ 0.17
TRAF4-202ENST00000262396 MYL6BP14649 208 aa16.12■□□□□ 0.17
TRAF4-202ENST00000262396 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
TRAF4-202ENST00000262396 SIPA1L3O60292 1781 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-202ENST00000262396 NPR1P16066 1061 aa16.11■□□□□ 0.17
TRAF4-202ENST00000262396 NYXQ9GZU5 481 aa16.11■□□□□ 0.17
TRAF4-202ENST00000262396 SCN7AQ01118 1682 aa16.11■□□□□ 0.17
TRAF4-202ENST00000262396 NBPF26B4DH59 902 aa16.1■□□□□ 0.17
TRAF4-202ENST00000262396 RALBP1Q15311 655 aa16.1■□□□□ 0.17
TRAF4-202ENST00000262396 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
TRAF4-202ENST00000262396 NBPF10Q6P3W6 841 aaKnown RBP16.1■□□□□ 0.17
TRAF4-202ENST00000262396 NBPF15Q8N660 670 aa16.1■□□□□ 0.17
TRAF4-202ENST00000262396 THUMPD2Q9BTF0 503 aaKnown RBP16.1■□□□□ 0.17
TRAF4-202ENST00000262396 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
TRAF4-202ENST00000262396 ALDH1B1P30837 517 aa16.09■□□□□ 0.17
TRAF4-202ENST00000262396 LMOD3Q0VAK6 560 aa16.09■□□□□ 0.17
TRAF4-202ENST00000262396 TMX4Q9H1E5 349 aaPredicted RBP16.09■□□□□ 0.17
TRAF4-202ENST00000262396 CEP350Q5VT06 3117 aa16.09■□□□□ 0.17
TRAF4-202ENST00000262396 RIPK4P57078 832 aa16.08■□□□□ 0.16
TRAF4-202ENST00000262396 HTRA3P83110 453 aa16.08■□□□□ 0.16
TRAF4-202ENST00000262396 HLFQ16534 295 aa16.08■□□□□ 0.16
TRAF4-202ENST00000262396 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
TRAF4-202ENST00000262396 RGL2O15211 777 aa16.07■□□□□ 0.16
TRAF4-202ENST00000262396 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
TRAF4-202ENST00000262396 PRELPP51888 382 aa16.07■□□□□ 0.16
TRAF4-202ENST00000262396 EIF4A1P60842 406 aaKnown RBP16.07■□□□□ 0.16
TRAF4-202ENST00000262396 WDR43Q15061 677 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRAF4-202ENST00000262396 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
TRAF4-202ENST00000262396 PLEKHF1Q96S99 279 aa16.07■□□□□ 0.16
TRAF4-202ENST00000262396 ZBTB3Q9H5J0 574 aa16.07■□□□□ 0.16
TRAF4-202ENST00000262396 DLEC1Q9Y238 1755 aa16.06■□□□□ 0.16
TRAF4-202ENST00000262396 TNRC6CQ9HCJ0 1690 aaKnown RBP16.06■□□□□ 0.16
TRAF4-202ENST00000262396 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
TRAF4-202ENST00000262396 LTBP3Q9NS15 1303 aa16.06■□□□□ 0.16
TRAF4-202ENST00000262396 ERVV-1B6SEH8 477 aa16.06■□□□□ 0.16
TRAF4-202ENST00000262396 GPTP24298 496 aa16.06■□□□□ 0.16
TRAF4-202ENST00000262396 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
TRAF4-202ENST00000262396 NEUROD2Q15784 382 aa16.06■□□□□ 0.16
TRAF4-202ENST00000262396 RTKN2Q8IZC4 609 aa16.06■□□□□ 0.16
TRAF4-202ENST00000262396 KLRG1Q96E93 195 aa16.06■□□□□ 0.16
TRAF4-202ENST00000262396 IQCA1LA6NCM1 817 aa16.05■□□□□ 0.16
TRAF4-202ENST00000262396 NUTM1Q86Y26 1132 aa16.05■□□□□ 0.16
TRAF4-202ENST00000262396 LAS1LQ9Y4W2 734 aaKnown RBP16.05■□□□□ 0.16
TRAF4-202ENST00000262396 SBF1O95248 1867 aa16.04■□□□□ 0.16
TRAF4-202ENST00000262396 DDNO94850 711 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-202ENST00000262396 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRAF4-202ENST00000262396 PPP1R42Q7Z4L9 355 aa16.04■□□□□ 0.16
TRAF4-202ENST00000262396 ZNF277Q9NRM2 450 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-202ENST00000262396 TTLL7Q6ZT98 887 aa16.03■□□□□ 0.16
TRAF4-202ENST00000262396 DNAJC5GQ8N7S2 189 aa16.03■□□□□ 0.16
TRAF4-202ENST00000262396 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
TRAF4-202ENST00000262396 CLEC11AQ9Y240 323 aa16.03■□□□□ 0.16
TRAF4-202ENST00000262396 ANKRD31Q8N7Z5 1873 aa16.03■□□□□ 0.16
TRAF4-202ENST00000262396 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.16
TRAF4-202ENST00000262396 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.16
TRAF4-202ENST00000262396 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
TRAF4-202ENST00000262396 RBM17Q96I25 401 aaKnown RBP16.02■□□□□ 0.16
TRAF4-202ENST00000262396 BCORQ6W2J9 1755 aa16.02■□□□□ 0.15
TRAF4-202ENST00000262396 ERBB4Q15303 1308 aa16.01■□□□□ 0.15
TRAF4-202ENST00000262396 MYBBP1AQ9BQG0 1328 aaKnown RBP16.01■□□□□ 0.15
TRAF4-202ENST00000262396 AIMP1Q12904 312 aaKnown RBP16.01■□□□□ 0.15
TRAF4-202ENST00000262396 CHADLQ6NUI6 762 aa16.01■□□□□ 0.15
TRAF4-202ENST00000262396 CCDC146Q8IYE0 955 aa16.01■□□□□ 0.15
TRAF4-202ENST00000262396 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
TRAF4-202ENST00000262396 TIAM2Q8IVF5 1701 aa16.01■□□□□ 0.15
TRAF4-202ENST00000262396 COL11A2P13942 1736 aaPredicted RBP16■□□□□ 0.15
TRAF4-202ENST00000262396 TMPOP42166 694 aaKnown RBP16■□□□□ 0.15
TRAF4-202ENST00000262396 PARP10Q53GL7 1025 aa16■□□□□ 0.15
TRAF4-202ENST00000262396 CC2D2BQ6DHV5 1058 aa16■□□□□ 0.15
TRAF4-202ENST00000262396 NLRP3Q96P20 1036 aa16■□□□□ 0.15
TRAF4-202ENST00000262396 SLX4Q8IY92 1834 aa15.99■□□□□ 0.15
TRAF4-202ENST00000262396 KLRG2A4D1S0 409 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-202ENST00000262396 IARSP41252 1262 aaKnown RBP15.99■□□□□ 0.15
TRAF4-202ENST00000262396 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
TRAF4-202ENST00000262396 HSP90AB3PQ58FF7 597 aa15.99■□□□□ 0.15
TRAF4-202ENST00000262396 SUSD4Q5VX71 490 aa15.99■□□□□ 0.15
TRAF4-202ENST00000262396 OLFM4Q6UX06 510 aa15.99■□□□□ 0.15
TRAF4-202ENST00000262396 GIGYF2Q6Y7W6 1299 aaKnown RBP15.99■□□□□ 0.15
TRAF4-202ENST00000262396 C7orf43Q8WVR3 580 aa15.99■□□□□ 0.15
TRAF4-202ENST00000262396 UTP14AQ9BVJ6 771 aaKnown RBP15.99■□□□□ 0.15
TRAF4-202ENST00000262396 BABAM1Q9NWV8 329 aa15.99■□□□□ 0.15
TRAF4-202ENST00000262396 WDR90Q96KV7 1748 aa15.99■□□□□ 0.15
TRAF4-202ENST00000262396 CCDC88AQ3V6T2 1871 aa15.98■□□□□ 0.15
TRAF4-202ENST00000262396 HACL1Q9UJ83 578 aa15.98■□□□□ 0.15
TRAF4-202ENST00000262396 GJA3Q9Y6H8 435 aa15.98■□□□□ 0.15
TRAF4-202ENST00000262396 CACNA1SQ13698 1873 aa15.97■□□□□ 0.15
TRAF4-202ENST00000262396 POTECB2RU33 542 aa15.97■□□□□ 0.15
TRAF4-202ENST00000262396 PPEF1O14829 653 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-202ENST00000262396 LMOD1P29536 600 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-202ENST00000262396 GRIPAP1Q4V328 841 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms