RNA–Protein interactions for RNA: ENST00000261884.7

TRIP4-201, Transcript of thyroid hormone receptor interactor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP4, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-201ENST00000261884 ATP10DQ9P241 1426 aa23.71■■□□□ 1.39
TRIP4-201ENST00000261884 ANKRD13DQ6ZTN6 518 aa23.7■■□□□ 1.38
TRIP4-201ENST00000261884 MAP3K2Q9Y2U5 619 aa23.7■■□□□ 1.38
TRIP4-201ENST00000261884 RGS3P49796 1198 aa23.69■■□□□ 1.38
TRIP4-201ENST00000261884 ITPK1Q13572 414 aa23.69■■□□□ 1.38
TRIP4-201ENST00000261884 RIC3Q7Z5B4 369 aa23.69■■□□□ 1.38
TRIP4-201ENST00000261884 N4BP2Q86UW6 1770 aaPredicted RBP23.69■■□□□ 1.38
TRIP4-201ENST00000261884 GSE1Q14687 1217 aa23.68■■□□□ 1.38
TRIP4-201ENST00000261884 SRCIN1Q9C0H9 1055 aa23.68■■□□□ 1.38
TRIP4-201ENST00000261884 IGHDP01880 384 aa23.67■■□□□ 1.38
TRIP4-201ENST00000261884 ZBTB1Q9Y2K1 713 aa23.67■■□□□ 1.38
TRIP4-201ENST00000261884 TRIM37O94972 964 aa23.67■■□□□ 1.38
TRIP4-201ENST00000261884 IL6STP40189 918 aaPredicted RBP23.67■■□□□ 1.38
TRIP4-201ENST00000261884 BEND3Q5T5X7 828 aa23.67■■□□□ 1.38
TRIP4-201ENST00000261884 PLBD2Q8NHP8 589 aa23.67■■□□□ 1.38
TRIP4-201ENST00000261884 CCDC87Q9NVE4 849 aa23.66■■□□□ 1.38
TRIP4-201ENST00000261884 LY75O60449 1722 aa23.66■■□□□ 1.38
TRIP4-201ENST00000261884 CRKLP46109 303 aaKnown RBP23.66■■□□□ 1.38
TRIP4-201ENST00000261884 NEXNQ0ZGT2 675 aa23.66■■□□□ 1.38
TRIP4-201ENST00000261884 ILDR1Q86SU0 546 aaPredicted RBP23.66■■□□□ 1.38
TRIP4-201ENST00000261884 CCNL1Q9UK58 526 aaPredicted RBP23.65■■□□□ 1.38
TRIP4-201ENST00000261884 INTS5Q6P9B9 1019 aaKnown RBP23.64■■□□□ 1.38
TRIP4-201ENST00000261884 LINS1Q8NG48 757 aa23.64■■□□□ 1.38
TRIP4-201ENST00000261884 DAXXQ9UER7 740 aaPredicted RBP23.64■■□□□ 1.38
TRIP4-201ENST00000261884 COL5A3P25940 1745 aaPredicted RBP23.64■■□□□ 1.38
TRIP4-201ENST00000261884 METTL22Q9BUU2 404 aaPredicted RBP23.64■■□□□ 1.37
TRIP4-201ENST00000261884 ZNF330Q9Y3S2 320 aaPredicted RBP23.64■■□□□ 1.37
TRIP4-201ENST00000261884 IBTKQ9P2D0 1353 aaPredicted RBP23.63■■□□□ 1.37
TRIP4-201ENST00000261884 ALDH1L1O75891 902 aa23.63■■□□□ 1.37
TRIP4-201ENST00000261884 TTLL7Q6ZT98 887 aa23.63■■□□□ 1.37
TRIP4-201ENST00000261884 RREB1Q92766 1687 aa23.63■■□□□ 1.37
TRIP4-201ENST00000261884 KIF6Q6ZMV9 814 aa23.62■■□□□ 1.37
TRIP4-201ENST00000261884 MEIS3Q99687 375 aa23.62■■□□□ 1.37
TRIP4-201ENST00000261884 PCDHB15Q9Y5E8 787 aa23.62■■□□□ 1.37
TRIP4-201ENST00000261884 CNTNAP4Q9C0A0 1308 aa23.62■■□□□ 1.37
TRIP4-201ENST00000261884 GNAI3P08754 354 aa23.62■■□□□ 1.37
TRIP4-201ENST00000261884 EIF5P55010 431 aaKnown RBP23.61■■□□□ 1.37
TRIP4-201ENST00000261884 LINC00116Q8NCU8 138 aa23.61■■□□□ 1.37
TRIP4-201ENST00000261884 HMGB2P26583 209 aaKnown RBP23.6■■□□□ 1.37
TRIP4-201ENST00000261884 SLC27A3Q5K4L6 730 aa23.6■■□□□ 1.37
TRIP4-201ENST00000261884 RC3H1Q5TC82 1133 aaKnown RBP23.6■■□□□ 1.37
TRIP4-201ENST00000261884 ARFGEF2Q9Y6D5 1785 aa23.59■■□□□ 1.37
TRIP4-201ENST00000261884 USP44Q9H0E7 712 aa23.59■■□□□ 1.37
TRIP4-201ENST00000261884 ZBTB3Q9H5J0 574 aa23.59■■□□□ 1.37
TRIP4-201ENST00000261884 MAP3K15Q6ZN16 1313 aa23.58■■□□□ 1.37
TRIP4-201ENST00000261884 KCNQ4P56696 695 aa23.58■■□□□ 1.37
TRIP4-201ENST00000261884 MYD88Q99836 296 aa23.58■■□□□ 1.37
TRIP4-201ENST00000261884 MYH14Q7Z406 1995 aaKnown RBP23.58■■□□□ 1.36
TRIP4-201ENST00000261884 IGKV5-2P06315 115 aa23.57■■□□□ 1.36
TRIP4-201ENST00000261884 CWF19L2Q2TBE0 894 aaKnown RBP23.57■■□□□ 1.36
TRIP4-201ENST00000261884 NUP188Q5SRE5 1749 aa23.57■■□□□ 1.36
TRIP4-201ENST00000261884 NEURL1BA8MQ27 555 aa23.57■■□□□ 1.36
TRIP4-201ENST00000261884 PLSCR1O15162 318 aa23.57■■□□□ 1.36
TRIP4-201ENST00000261884 GNAI2P04899 355 aa23.57■■□□□ 1.36
TRIP4-201ENST00000261884 UBTFL1P0CB47 393 aaPredicted RBP23.57■■□□□ 1.36
TRIP4-201ENST00000261884 RWDD1Q9H446 243 aaPredicted RBP23.57■■□□□ 1.36
TRIP4-201ENST00000261884 C1orf115Q9H7X2 142 aa23.57■■□□□ 1.36
TRIP4-201ENST00000261884 HDAC1Q13547 482 aaPredicted RBP23.56■■□□□ 1.36
TRIP4-201ENST00000261884 DZIP3Q86Y13 1208 aaKnown RBP23.56■■□□□ 1.36
TRIP4-201ENST00000261884 ERVV-1B6SEH8 477 aa23.55■■□□□ 1.36
TRIP4-201ENST00000261884 ARXQ96QS3 562 aa23.55■■□□□ 1.36
TRIP4-201ENST00000261884 C9orf78Q9NZ63 289 aaPredicted RBP23.55■■□□□ 1.36
TRIP4-201ENST00000261884 HDAC5Q9UQL6 1122 aa23.55■■□□□ 1.36
TRIP4-201ENST00000261884 COL15A1P39059 1388 aa23.55■■□□□ 1.36
TRIP4-201ENST00000261884 HSP90AB3PQ58FF7 597 aa23.54■■□□□ 1.36
TRIP4-201ENST00000261884 RPAP2Q8IXW5 612 aaPredicted RBP23.54■■□□□ 1.36
TRIP4-201ENST00000261884 A0A087WZG4 1122 aa23.54■■□□□ 1.36
TRIP4-201ENST00000261884 GRM8O00222 908 aa23.54■■□□□ 1.36
TRIP4-201ENST00000261884 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
TRIP4-201ENST00000261884 APBA3O96018 575 aa23.54■■□□□ 1.36
TRIP4-201ENST00000261884 GCKRQ14397 625 aa23.54■■□□□ 1.36
TRIP4-201ENST00000261884 GIGYF2Q6Y7W6 1299 aaKnown RBP23.54■■□□□ 1.36
TRIP4-201ENST00000261884 LRRC4BQ9NT99 713 aa23.54■■□□□ 1.36
TRIP4-201ENST00000261884 TAF1LQ8IZX4 1826 aa23.53■■□□□ 1.36
TRIP4-201ENST00000261884 NBPF7P0C2Y1 421 aaPredicted RBP23.53■■□□□ 1.36
TRIP4-201ENST00000261884 UTYO14607 1347 aa23.53■■□□□ 1.36
TRIP4-201ENST00000261884 TCIRG1Q13488 830 aa23.52■■□□□ 1.36
TRIP4-201ENST00000261884 TBC1D2BQ9UPU7 963 aa23.52■■□□□ 1.36
TRIP4-201ENST00000261884 RPS6KA4O75676 772 aa23.52■■□□□ 1.36
TRIP4-201ENST00000261884 CCDC191Q8NCU4 936 aa23.52■■□□□ 1.36
TRIP4-201ENST00000261884 BRPF3Q9ULD4 1205 aa23.52■■□□□ 1.36
TRIP4-201ENST00000261884 C4BP0C0L5 1744 aa23.52■■□□□ 1.36
TRIP4-201ENST00000261884 ATP5J2-PTCD1G3V325 749 aa23.51■■□□□ 1.35
TRIP4-201ENST00000261884 SEC24BO95487 1268 aa23.51■■□□□ 1.35
TRIP4-201ENST00000261884 TRIM28Q13263 835 aaKnown RBP23.51■■□□□ 1.35
TRIP4-201ENST00000261884 TXNRD1Q16881 649 aa23.51■■□□□ 1.35
TRIP4-201ENST00000261884 GNPATO15228 680 aa23.5■■□□□ 1.35
TRIP4-201ENST00000261884 CEP85Q6P2H3 762 aa23.5■■□□□ 1.35
TRIP4-201ENST00000261884 ANKRD44Q8N8A2 993 aa23.5■■□□□ 1.35
TRIP4-201ENST00000261884 RTCBQ9Y3I0 505 aaKnown RBP23.5■■□□□ 1.35
TRIP4-201ENST00000261884 ISCA1Q9BUE6 129 aa23.5■■□□□ 1.35
TRIP4-201ENST00000261884 CWC25Q9NXE8 425 aaPredicted RBP23.5■■□□□ 1.35
TRIP4-201ENST00000261884 LRRFIP2Q9Y608 721 aaKnown RBP23.5■■□□□ 1.35
TRIP4-201ENST00000261884 TNS1Q9HBL0 1735 aaKnown RBP23.49■■□□□ 1.35
TRIP4-201ENST00000261884 AK7Q96M32 723 aa23.49■■□□□ 1.35
TRIP4-201ENST00000261884 RGL2O15211 777 aa23.49■■□□□ 1.35
TRIP4-201ENST00000261884 HLFQ16534 295 aa23.49■■□□□ 1.35
TRIP4-201ENST00000261884 RTN4Q9NQC3 1192 aaKnown RBP23.49■■□□□ 1.35
TRIP4-201ENST00000261884 SIRT2Q8IXJ6 389 aa23.48■■□□□ 1.35
TRIP4-201ENST00000261884 PROM2Q8N271 834 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms