RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 CEP112Q8N8E3 955 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 PIK3C2BO00750 1634 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 IGHDP01880 384 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 RASSF8Q8NHQ8 419 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 ATRIPQ8WXE1 791 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 MROH2AA6NES4 1674 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 KDM4AO75164 1064 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 MCM3P25205 808 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 KIF5BP33176 963 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 EIF5P55010 431 aaKnown RBP12.39□□□□□ -0.43
KPNA3-201ENST00000261667 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 DZIP1Q86YF9 867 aaKnown RBP12.39□□□□□ -0.43
KPNA3-201ENST00000261667 HYPKQ9NX55 129 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
KPNA3-201ENST00000261667 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
KPNA3-201ENST00000261667 CAMSAP1Q5T5Y3 1602 aa12.38□□□□□ -0.43
KPNA3-201ENST00000261667 CBFA2T2O43439 604 aa12.38□□□□□ -0.43
KPNA3-201ENST00000261667 MAP2K1Q02750 393 aaPredicted RBP12.38□□□□□ -0.43
KPNA3-201ENST00000261667 CFAP100Q494V2 611 aa12.38□□□□□ -0.43
KPNA3-201ENST00000261667 CCDC181Q5TID7 509 aa12.38□□□□□ -0.43
KPNA3-201ENST00000261667 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
KPNA3-201ENST00000261667 KIF5CO60282 957 aa12.37□□□□□ -0.43
KPNA3-201ENST00000261667 SMC1AQ14683 1233 aaKnown RBP12.37□□□□□ -0.43
KPNA3-201ENST00000261667 CCDC121Q6ZUS5 278 aa12.37□□□□□ -0.43
KPNA3-201ENST00000261667 GOLGA6L9A6NEM1 432 aa12.37□□□□□ -0.43
KPNA3-201ENST00000261667 MRFAP1Q9Y605 127 aa12.37□□□□□ -0.43
KPNA3-201ENST00000261667 NEDD9Q14511 834 aa12.37□□□□□ -0.43
KPNA3-201ENST00000261667 CHD1LQ86WJ1 897 aa12.37□□□□□ -0.43
KPNA3-201ENST00000261667 KIAA1210Q9ULL0 1709 aa12.37□□□□□ -0.43
KPNA3-201ENST00000261667 GPATCH3Q96I76 525 aa12.37□□□□□ -0.43
KPNA3-201ENST00000261667 JPH2Q9BR39 696 aaPredicted RBP12.36□□□□□ -0.43
KPNA3-201ENST00000261667 PRAG1Q86YV5 1406 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 ERC2O15083 957 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 IQCEQ6IPM2 695 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 CEP120Q8N960 986 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 FEZ2Q9UHY8 353 aaPredicted RBP12.36□□□□□ -0.43
KPNA3-201ENST00000261667 EVCP57679 992 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 SAFB2Q14151 953 aaKnown RBP eCLIP12.36□□□□□ -0.43
KPNA3-201ENST00000261667 MMS22LQ6ZRQ5 1243 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 FAM200AQ8TCP9 573 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 SNX21Q969T3 373 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 ZNF215Q9UL58 517 aaPredicted RBP12.36□□□□□ -0.43
KPNA3-201ENST00000261667 ABCC3O15438 1527 aa12.36□□□□□ -0.43
KPNA3-201ENST00000261667 CCDC175P0C221 793 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 LARP1BQ659C4 914 aaKnown RBP12.35□□□□□ -0.43
KPNA3-201ENST00000261667 TMC6Q7Z403 805 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
KPNA3-201ENST00000261667 N4BP2L2Q92802 583 aaPredicted RBP12.35□□□□□ -0.43
KPNA3-201ENST00000261667 LMOD2Q6P5Q4 547 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 RUFY2Q8WXA3 655 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 ZNHIT6Q9NWK9 470 aaKnown RBP12.35□□□□□ -0.43
KPNA3-201ENST00000261667 ODF2LQ9ULJ1 636 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 IQGAP1P46940 1657 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 ISM2Q6H9L7 571 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 SYNE3Q6ZMZ3 975 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 ZNF513Q8N8E2 541 aaPredicted RBP12.35□□□□□ -0.43
KPNA3-201ENST00000261667 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 JARID2Q92833 1246 aaPredicted RBP12.35□□□□□ -0.43
KPNA3-201ENST00000261667 TRIM6Q9C030 488 aaPredicted RBP12.35□□□□□ -0.43
KPNA3-201ENST00000261667 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
KPNA3-201ENST00000261667 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.35□□□□□ -0.43
KPNA3-201ENST00000261667 EP400NLQ6ZTU2 488 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 RABEP2Q9H5N1 569 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 CAPN7Q9Y6W3 813 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 TSPOAP1O95153 1857 aa12.35□□□□□ -0.43
KPNA3-201ENST00000261667 MX1P20591 662 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 ZKSCAN8Q15776 578 aaPredicted RBP12.34□□□□□ -0.43
KPNA3-201ENST00000261667 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 HDXQ7Z353 690 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 GOLGA1Q92805 767 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 GCC1Q96CN9 775 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 ZEB2O60315 1214 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 FILIP1LQ4L180 1135 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 GPRASP1Q5JY77 1395 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 KIF1BO60333 1816 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 MAGEA9P43362 315 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 UBE2HP62256 183 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 MIPOL1Q8TD10 442 aa12.34□□□□□ -0.43
KPNA3-201ENST00000261667 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
KPNA3-201ENST00000261667 BUB1BO60566 1050 aaPredicted RBP12.33□□□□□ -0.44
KPNA3-201ENST00000261667 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
KPNA3-201ENST00000261667 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 NDUFAB1O14561 156 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 ME1P48163 572 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 B4GALNT4Q76KP1 1039 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 AFAP1L1Q8TED9 768 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 DDX41Q9UJV9 622 aaKnown RBP12.33□□□□□ -0.44
KPNA3-201ENST00000261667 GUCY2CP25092 1073 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 ERCC6LQ2NKX8 1250 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 EFCAB13Q8IY85 973 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 ANO10Q9NW15 660 aa12.33□□□□□ -0.44
KPNA3-201ENST00000261667 ADGRB3O60242 1522 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 PLEKHH1Q9ULM0 1364 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
KPNA3-201ENST00000261667 PPLO60437 1756 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms