RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 FAM184AQ8NB25 1140 aa19.34■□□□□ 0.69
SNCAIP-202ENST00000261368 JARID2Q92833 1246 aaPredicted RBP19.34■□□□□ 0.69
SNCAIP-202ENST00000261368 IGSF1Q8N6C5 1336 aa19.34■□□□□ 0.69
SNCAIP-202ENST00000261368 CKAP2LQ8IYA6 745 aa19.34■□□□□ 0.69
SNCAIP-202ENST00000261368 MCM5P33992 734 aa19.33■□□□□ 0.69
SNCAIP-202ENST00000261368 CEBPZQ03701 1054 aaKnown RBP19.33■□□□□ 0.69
SNCAIP-202ENST00000261368 ECHDC1Q9NTX5 307 aa19.33■□□□□ 0.69
SNCAIP-202ENST00000261368 DLC1Q96QB1 1528 aa19.33■□□□□ 0.69
SNCAIP-202ENST00000261368 ADCK5Q3MIX3 580 aa19.33■□□□□ 0.68
SNCAIP-202ENST00000261368 PRDM10Q9NQV6 1147 aa19.33■□□□□ 0.68
SNCAIP-202ENST00000261368 BICD2Q8TD16 824 aa19.33■□□□□ 0.68
SNCAIP-202ENST00000261368 SIRT1Q96EB6 747 aa19.33■□□□□ 0.68
SNCAIP-202ENST00000261368 MYL6BP14649 208 aa19.32■□□□□ 0.68
SNCAIP-202ENST00000261368 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
SNCAIP-202ENST00000261368 REREQ9P2R6 1566 aa19.31■□□□□ 0.68
SNCAIP-202ENST00000261368 HTATSF1O43719 755 aaKnown RBP19.31■□□□□ 0.68
SNCAIP-202ENST00000261368 RIC3Q7Z5B4 369 aa19.31■□□□□ 0.68
SNCAIP-202ENST00000261368 PI4K2BQ8TCG2 481 aa19.31■□□□□ 0.68
SNCAIP-202ENST00000261368 FBXW7Q969H0 707 aa19.31■□□□□ 0.68
SNCAIP-202ENST00000261368 PPFIA3O75145 1194 aa19.3■□□□□ 0.68
SNCAIP-202ENST00000261368 LETM1O95202 739 aaPredicted RBP19.3■□□□□ 0.68
SNCAIP-202ENST00000261368 NOLC1Q14978 699 aaKnown RBP eCLIP19.3■□□□□ 0.68
SNCAIP-202ENST00000261368 LSG1Q9H089 658 aaKnown RBP19.3■□□□□ 0.68
SNCAIP-202ENST00000261368 SETD1BQ9UPS6 1966 aaKnown RBP19.3■□□□□ 0.68
SNCAIP-202ENST00000261368 FAM227BQ96M60 508 aa19.3■□□□□ 0.68
SNCAIP-202ENST00000261368 RBM8AQ9Y5S9 174 aaKnown RBP19.3■□□□□ 0.68
SNCAIP-202ENST00000261368 SALL3Q9BXA9 1300 aa19.3■□□□□ 0.68
SNCAIP-202ENST00000261368 KLHDC4Q8TBB5 520 aa19.29■□□□□ 0.68
SNCAIP-202ENST00000261368 H3BQV1 296 aa19.29■□□□□ 0.68
SNCAIP-202ENST00000261368 CCDC192P0DO97 292 aa19.29■□□□□ 0.68
SNCAIP-202ENST00000261368 KRT85P78386 507 aa19.29■□□□□ 0.68
SNCAIP-202ENST00000261368 IFFO2Q5TF58 517 aa19.29■□□□□ 0.68
SNCAIP-202ENST00000261368 BLOC1S2Q6QNY1 142 aa19.29■□□□□ 0.68
SNCAIP-202ENST00000261368 OVOS2A0A0J9YW53 1432 aa19.29■□□□□ 0.68
SNCAIP-202ENST00000261368 OVOS2Q6IE36 1432 aa19.29■□□□□ 0.68
SNCAIP-202ENST00000261368 GOLGA6L6A8MZA4 724 aa19.28■□□□□ 0.68
SNCAIP-202ENST00000261368 NBPF6Q5VWK0 638 aa19.28■□□□□ 0.68
SNCAIP-202ENST00000261368 DDX11Q96FC9 970 aa19.28■□□□□ 0.68
SNCAIP-202ENST00000261368 NBPF4Q96M43 638 aa19.28■□□□□ 0.68
SNCAIP-202ENST00000261368 RICTORQ6R327 1708 aa19.28■□□□□ 0.68
SNCAIP-202ENST00000261368 KCNA6P17658 529 aa19.28■□□□□ 0.68
SNCAIP-202ENST00000261368 DNAJC2Q99543 621 aaKnown RBP19.28■□□□□ 0.68
SNCAIP-202ENST00000261368 MAP7D2Q96T17 732 aa19.28■□□□□ 0.68
SNCAIP-202ENST00000261368 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
SNCAIP-202ENST00000261368 PLEKHO1Q53GL0 409 aaPredicted RBP19.27■□□□□ 0.68
SNCAIP-202ENST00000261368 RNF20Q5VTR2 975 aa19.27■□□□□ 0.68
SNCAIP-202ENST00000261368 EIF4A1P60842 406 aaKnown RBP19.27■□□□□ 0.68
SNCAIP-202ENST00000261368 NUP62CLQ9H1M0 184 aa19.27■□□□□ 0.68
SNCAIP-202ENST00000261368 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.68
SNCAIP-202ENST00000261368 DYNC1I1O14576 645 aa19.27■□□□□ 0.67
SNCAIP-202ENST00000261368 NMIQ13287 307 aaPredicted RBP19.27■□□□□ 0.67
SNCAIP-202ENST00000261368 PIP4K2AP48426 406 aaPredicted RBP19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 BEND3Q5T5X7 828 aa19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 ZSCAN31Q96LW9 406 aaPredicted RBP19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 TRIM5Q9C035 493 aa19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 TNMDQ9H2S6 317 aa19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 PROSER3Q2NL68 480 aa19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 SSH2Q76I76 1423 aa19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 PRAMEF22A3QJZ6 481 aa19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 ME3Q16798 604 aa19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 NDUFB9Q9Y6M9 179 aa19.26■□□□□ 0.67
SNCAIP-202ENST00000261368 KDM4AO75164 1064 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 PSMA5P28066 241 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 SPATA32Q96LK8 384 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 AOX1Q06278 1338 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 UVSSAQ2YD98 709 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 ERC1Q8IUD2 1116 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 EDC3Q96F86 508 aaKnown RBP19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 HYPKQ9NX55 129 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 PHF8Q9UPP1 1060 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 HDAC5Q9UQL6 1122 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 DDX58O95786 925 aaKnown RBP19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 NEXNQ0ZGT2 675 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 CREB3L3Q68CJ9 461 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 ZNF592Q92610 1267 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 EVI5LQ96CN4 794 aa19.25■□□□□ 0.67
SNCAIP-202ENST00000261368 MAP3K11Q16584 847 aa19.24■□□□□ 0.67
SNCAIP-202ENST00000261368 SH2B1Q9NRF2 756 aaPredicted RBP19.24■□□□□ 0.67
SNCAIP-202ENST00000261368 MTMR6Q9Y217 621 aa19.24■□□□□ 0.67
SNCAIP-202ENST00000261368 LRRC2Q9BYS8 371 aa19.24■□□□□ 0.67
SNCAIP-202ENST00000261368 CEP170BQ9Y4F5 1589 aaPredicted RBP19.24■□□□□ 0.67
SNCAIP-202ENST00000261368 SLC39A6Q13433 755 aa19.23■□□□□ 0.67
SNCAIP-202ENST00000261368 RPAP1Q9BWH6 1393 aaPredicted RBP19.23■□□□□ 0.67
SNCAIP-202ENST00000261368 CDC37L1Q7L3B6 337 aa19.23■□□□□ 0.67
SNCAIP-202ENST00000261368 LUZP1Q86V48 1076 aa19.23■□□□□ 0.67
SNCAIP-202ENST00000261368 POLA2Q14181 598 aa19.23■□□□□ 0.67
SNCAIP-202ENST00000261368 DACT1Q9NYF0 836 aa19.23■□□□□ 0.67
SNCAIP-202ENST00000261368 CCDC171Q6TFL3 1326 aa19.23■□□□□ 0.67
SNCAIP-202ENST00000261368 RIMS1Q86UR5 1692 aaKnown RBP19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 VPS53Q5VIR6 699 aa19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 TTC14Q96N46 770 aa19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 USP31Q70CQ4 1352 aa19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 PDCP20941 246 aa19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 HMGN5P82970 282 aaKnown RBP19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 THEMISQ8N1K5 641 aaPredicted RBP19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 TPCN1Q9ULQ1 816 aa19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 BICC1Q9H694 974 aaKnown RBP19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 TTC41PQ6P2S7 1318 aa19.22■□□□□ 0.67
SNCAIP-202ENST00000261368 KIF3AQ9Y496 699 aa19.21■□□□□ 0.67
SNCAIP-202ENST00000261368 CSB-PGBD3P0DP91 1061 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms