RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 IER5Q5VY09 327 aa7.97□□□□□ -1.13
CCDC54-201ENST00000261058 GLYCTKQ8IVS8 523 aa7.97□□□□□ -1.13
CCDC54-201ENST00000261058 SLC35F4A4IF30 521 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 FAM13AO94988 1023 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 MPSTP25325 297 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 BRD2P25440 801 aaKnown RBP7.96□□□□□ -1.13
CCDC54-201ENST00000261058 DGKZQ13574 1117 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 ETFBKMTQ8IXQ9 262 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 AIDAQ96BJ3 306 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 ZIC5Q96T25 663 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 KLK14Q9P0G3 267 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 GMPR2Q9P2T1 348 aaKnown RBP7.96□□□□□ -1.13
CCDC54-201ENST00000261058 DMGDHQ9UI17 866 aaKnown RBP7.96□□□□□ -1.13
CCDC54-201ENST00000261058 SOBPA7XYQ1 873 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 F11P03951 625 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 PTSQ03393 145 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 HIF1AQ16665 826 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 ABTB2Q8N961 1025 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 RHPN1Q8TCX5 695 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 CCDC9Q9Y3X0 531 aaKnown RBP7.95□□□□□ -1.14
CCDC54-201ENST00000261058 TGFBR3LH3BV60 316 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 ZBTB39O15060 712 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 MFAP1P55081 439 aaKnown RBP7.95□□□□□ -1.14
CCDC54-201ENST00000261058 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 IFT43Q96FT9 208 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 SUSD3Q96L08 255 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 C11orf95C9JLR9 678 aaPredicted RBP7.94□□□□□ -1.14
CCDC54-201ENST00000261058 THBS1P07996 1170 aa7.94□□□□□ -1.14
CCDC54-201ENST00000261058 EIF1AXP47813 144 aaKnown RBP7.94□□□□□ -1.14
CCDC54-201ENST00000261058 LBRQ14739 615 aaKnown RBP7.94□□□□□ -1.14
CCDC54-201ENST00000261058 DNAJC14Q6Y2X3 702 aaPredicted RBP7.94□□□□□ -1.14
CCDC54-201ENST00000261058 A0A1W2PNR3 127 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
CCDC54-201ENST00000261058 NOM1Q5C9Z4 860 aaKnown RBP7.93□□□□□ -1.14
CCDC54-201ENST00000261058 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
CCDC54-201ENST00000261058 SAMD5Q5TGI4 173 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 ALKBH2Q6NS38 261 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 NLRP8Q86W28 1048 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 ZNF280CQ8ND82 737 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 FZD6O60353 706 aa7.92□□□□□ -1.14
CCDC54-201ENST00000261058 UBAP2LQ14157 1087 aaKnown RBP7.92□□□□□ -1.14
CCDC54-201ENST00000261058 RGS22Q8NE09 1264 aa7.92□□□□□ -1.14
CCDC54-201ENST00000261058 ANKIB1Q9P2G1 1089 aa7.92□□□□□ -1.14
CCDC54-201ENST00000261058 TREML1Q86YW5 311 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 HSH2DQ96JZ2 352 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 RUBCNLQ9H714 662 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 GPAMQ9HCL2 828 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 BIN2Q9UBW5 565 aaPredicted RBP7.91□□□□□ -1.14
CCDC54-201ENST00000261058 DCTN4Q9UJW0 460 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 OPLAHO14841 1288 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 WFS1O76024 890 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 MICAL2O94851 1124 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 MARSP56192 900 aaKnown RBP7.9□□□□□ -1.14
CCDC54-201ENST00000261058 ARSJQ5FYB0 599 aaPredicted RBP7.9□□□□□ -1.14
CCDC54-201ENST00000261058 BICDL1Q6ZP65 573 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 RBCK1Q9BYM8 510 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 IGHA2P01877 340 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 INPP5BP32019 993 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 ZAP70P43403 619 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 TYRO3Q06418 890 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 BTLAQ7Z6A9 289 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 GMCL1Q96IK5 515 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 CITED4Q96RK1 184 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 GAS2L1Q99501 681 aaPredicted RBP7.89□□□□□ -1.15
CCDC54-201ENST00000261058 CUEDC1Q9NWM3 386 aaPredicted RBP7.89□□□□□ -1.15
CCDC54-201ENST00000261058 LRRC69Q6ZNQ3 347 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 ATCAYQ86WG3 371 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 TRIM22Q8IYM9 498 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 PGBD3Q8N328 593 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 ASB16Q96NS5 453 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 EFSO43281 561 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 ERCC3P19447 782 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 ITGA6P23229 1130 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 MZF1P28698 734 aaPredicted RBP7.87□□□□□ -1.15
CCDC54-201ENST00000261058 GRNP28799 593 aaKnown RBP7.87□□□□□ -1.15
CCDC54-201ENST00000261058 IDH3AP50213 366 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 DBN1Q16643 649 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 EFHC2Q5JST6 749 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 GJD3Q8N144 294 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 NDFIP2Q9NV92 336 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 CCDC87Q9NVE4 849 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 H7C1W4 665 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 FAM157BP0CG42 384 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 KCNQ4P56696 695 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 RGL4Q8IZJ4 473 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 FAM129BQ96TA1 746 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 C11orf16Q9NQ32 467 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 NDUFB5O43674 189 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 PDGFAP04085 211 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 ARSDP51689 593 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 FIGNL1Q6PIW4 674 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 ZNF837Q96EG3 531 aaPredicted RBP7.86□□□□□ -1.15
CCDC54-201ENST00000261058 ZCCHC2Q9C0B9 1178 aaKnown RBP7.86□□□□□ -1.15
CCDC54-201ENST00000261058 NUCKS1Q9H1E3 243 aaKnown RBP7.86□□□□□ -1.15
CCDC54-201ENST00000261058 FAM13BQ9NYF5 915 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 HCN2Q9UL51 889 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 BRPF3Q9ULD4 1205 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 PPFIA3O75145 1194 aa7.85□□□□□ -1.15
CCDC54-201ENST00000261058 MAPK1P28482 360 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms