RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 PDE6BP35913 854 aa17.05■□□□□ 0.32
CSHL1-201ENST00000259003 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
CSHL1-201ENST00000259003 RSPH6AQ9H0K4 717 aa17.05■□□□□ 0.32
CSHL1-201ENST00000259003 BTBD11A6QL63 1104 aa17.04■□□□□ 0.32
CSHL1-201ENST00000259003 SRGNP10124 158 aa17.04■□□□□ 0.32
CSHL1-201ENST00000259003 DCTN1Q14203 1278 aa17.04■□□□□ 0.32
CSHL1-201ENST00000259003 MCM10Q7L590 875 aa17.04■□□□□ 0.32
CSHL1-201ENST00000259003 DZIP3Q86Y13 1208 aaKnown RBP17.04■□□□□ 0.32
CSHL1-201ENST00000259003 CNBD1Q8NA66 436 aa17.04■□□□□ 0.32
CSHL1-201ENST00000259003 SETDB2Q96T68 719 aa17.04■□□□□ 0.32
CSHL1-201ENST00000259003 SCN4AP35499 1836 aa17.04■□□□□ 0.32
CSHL1-201ENST00000259003 TNS4Q8IZW8 715 aa17.03■□□□□ 0.32
CSHL1-201ENST00000259003 TEX13AQ9BXU3 409 aaPredicted RBP17.03■□□□□ 0.32
CSHL1-201ENST00000259003 TAOK3Q9H2K8 898 aa17.03■□□□□ 0.32
CSHL1-201ENST00000259003 NBPF26B4DH59 902 aa17.02■□□□□ 0.32
CSHL1-201ENST00000259003 DPY19L2Q6NUT2 758 aa17.02■□□□□ 0.32
CSHL1-201ENST00000259003 NBPF10Q6P3W6 841 aaKnown RBP17.02■□□□□ 0.32
CSHL1-201ENST00000259003 NBPF15Q8N660 670 aa17.02■□□□□ 0.32
CSHL1-201ENST00000259003 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
CSHL1-201ENST00000259003 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.32
CSHL1-201ENST00000259003 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.31
CSHL1-201ENST00000259003 LTBP3Q9NS15 1303 aa17.01■□□□□ 0.31
CSHL1-201ENST00000259003 FAM177BA6PVY3 158 aa17.01■□□□□ 0.31
CSHL1-201ENST00000259003 STYK1Q6J9G0 422 aa17.01■□□□□ 0.31
CSHL1-201ENST00000259003 SLC51AQ86UW1 340 aa17.01■□□□□ 0.31
CSHL1-201ENST00000259003 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
CSHL1-201ENST00000259003 NPHP1O15259 732 aa17■□□□□ 0.31
CSHL1-201ENST00000259003 CNKSR1Q969H4 720 aa17■□□□□ 0.31
CSHL1-201ENST00000259003 MASTLQ96GX5 879 aa17■□□□□ 0.31
CSHL1-201ENST00000259003 ZNF541Q9H0D2 1346 aa16.99■□□□□ 0.31
CSHL1-201ENST00000259003 ST5P78524 1137 aa16.99■□□□□ 0.31
CSHL1-201ENST00000259003 HLFQ16534 295 aa16.99■□□□□ 0.31
CSHL1-201ENST00000259003 CHADLQ6NUI6 762 aa16.99■□□□□ 0.31
CSHL1-201ENST00000259003 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
CSHL1-201ENST00000259003 KDM3BQ7LBC6 1761 aa16.98■□□□□ 0.31
CSHL1-201ENST00000259003 ADAMTSL1Q8N6G6 1762 aa16.98■□□□□ 0.31
CSHL1-201ENST00000259003 NBPF5PQ86XG9 351 aaPredicted RBP16.98■□□□□ 0.31
CSHL1-201ENST00000259003 ZNF277Q9NRM2 450 aaPredicted RBP16.98■□□□□ 0.31
CSHL1-201ENST00000259003 PDZRN3Q9UPQ7 1066 aa16.98■□□□□ 0.31
CSHL1-201ENST00000259003 COL4A5P29400 1685 aa16.97■□□□□ 0.31
CSHL1-201ENST00000259003 U2AF1L5P0DN76 240 aaPredicted RBP16.96■□□□□ 0.31
CSHL1-201ENST00000259003 U2AF1Q01081 240 aaKnown RBP eCLIP16.96■□□□□ 0.31
CSHL1-201ENST00000259003 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
CSHL1-201ENST00000259003 NIP7Q9Y221 180 aaKnown RBP eCLIP16.96■□□□□ 0.31
CSHL1-201ENST00000259003 LTBP1Q14766 1721 aa16.96■□□□□ 0.3
CSHL1-201ENST00000259003 SNRPA1P09661 255 aaKnown RBP16.95■□□□□ 0.3
CSHL1-201ENST00000259003 PPP2R1AP30153 589 aa16.95■□□□□ 0.3
CSHL1-201ENST00000259003 NPM2Q86SE8 214 aaKnown RBP16.95■□□□□ 0.3
CSHL1-201ENST00000259003 CREBZFQ9NS37 354 aa16.95■□□□□ 0.3
CSHL1-201ENST00000259003 TAF1P21675 1872 aa16.95■□□□□ 0.3
CSHL1-201ENST00000259003 PASKQ96RG2 1323 aa16.95■□□□□ 0.3
CSHL1-201ENST00000259003 ABCC12Q96J65 1359 aa16.94■□□□□ 0.3
CSHL1-201ENST00000259003 KLRG2A4D1S0 409 aaPredicted RBP16.94■□□□□ 0.3
CSHL1-201ENST00000259003 FOXN1O15353 648 aa16.94■□□□□ 0.3
CSHL1-201ENST00000259003 NPR1P16066 1061 aa16.94■□□□□ 0.3
CSHL1-201ENST00000259003 CCDC93Q567U6 631 aa16.94■□□□□ 0.3
CSHL1-201ENST00000259003 NGEFQ8N5V2 710 aa16.94■□□□□ 0.3
CSHL1-201ENST00000259003 FKBP4Q02790 459 aaKnown RBP eCLIP16.93■□□□□ 0.3
CSHL1-201ENST00000259003 EAPPQ56P03 285 aaPredicted RBP16.93■□□□□ 0.3
CSHL1-201ENST00000259003 CLEC4GQ6UXB4 293 aa16.93■□□□□ 0.3
CSHL1-201ENST00000259003 L3MBTL3Q96JM7 780 aaPredicted RBP16.93■□□□□ 0.3
CSHL1-201ENST00000259003 SNED1Q8TER0 1413 aa16.93■□□□□ 0.3
CSHL1-201ENST00000259003 ITGBL1O95965 494 aaPredicted RBP16.92■□□□□ 0.3
CSHL1-201ENST00000259003 NUTM1Q86Y26 1132 aa16.92■□□□□ 0.3
CSHL1-201ENST00000259003 CFAP53Q96M91 514 aa16.92■□□□□ 0.3
CSHL1-201ENST00000259003 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
CSHL1-201ENST00000259003 TRPM7Q96QT4 1865 aa16.91■□□□□ 0.3
CSHL1-201ENST00000259003 TTLL7Q6ZT98 887 aa16.91■□□□□ 0.3
CSHL1-201ENST00000259003 LDHDQ86WU2 507 aa16.91■□□□□ 0.3
CSHL1-201ENST00000259003 SYNE4Q8N205 404 aa16.91■□□□□ 0.3
CSHL1-201ENST00000259003 RTF1Q92541 710 aaKnown RBP16.91■□□□□ 0.3
CSHL1-201ENST00000259003 THUMPD2Q9BTF0 503 aaKnown RBP16.91■□□□□ 0.3
CSHL1-201ENST00000259003 RNF123Q5XPI4 1314 aa16.91■□□□□ 0.3
CSHL1-201ENST00000259003 LAMB2P55268 1798 aa16.9■□□□□ 0.3
CSHL1-201ENST00000259003 VEGFBP49765 207 aa16.9■□□□□ 0.3
CSHL1-201ENST00000259003 FMR1Q06787 632 aaKnown RBP eCLIP16.9■□□□□ 0.3
CSHL1-201ENST00000259003 SOGA3Q5TF21 947 aa16.9■□□□□ 0.3
CSHL1-201ENST00000259003 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
CSHL1-201ENST00000259003 TPTE2Q6XPS3 522 aa16.9■□□□□ 0.3
CSHL1-201ENST00000259003 ZNF652Q9Y2D9 606 aa16.9■□□□□ 0.3
CSHL1-201ENST00000259003 IQCA1LA6NCM1 817 aa16.88■□□□□ 0.29
CSHL1-201ENST00000259003 FZD9O00144 591 aa16.88■□□□□ 0.29
CSHL1-201ENST00000259003 GPTP24298 496 aa16.88■□□□□ 0.29
CSHL1-201ENST00000259003 EPHX2P34913 555 aa16.88■□□□□ 0.29
CSHL1-201ENST00000259003 IARSP41252 1262 aaKnown RBP16.88■□□□□ 0.29
CSHL1-201ENST00000259003 TAF7Q15545 349 aaPredicted RBP16.88■□□□□ 0.29
CSHL1-201ENST00000259003 C3orf67Q6ZVT6 689 aa16.88■□□□□ 0.29
CSHL1-201ENST00000259003 CLEC11AQ9Y240 323 aa16.88■□□□□ 0.29
CSHL1-201ENST00000259003 NUDCQ9Y266 331 aa16.88■□□□□ 0.29
CSHL1-201ENST00000259003 RRP7AQ9Y3A4 280 aaKnown RBP16.88■□□□□ 0.29
CSHL1-201ENST00000259003 UBN2Q6ZU65 1347 aa16.88■□□□□ 0.29
CSHL1-201ENST00000259003 TCERG1O14776 1098 aaKnown RBP16.87■□□□□ 0.29
CSHL1-201ENST00000259003 HACL1Q9UJ83 578 aa16.87■□□□□ 0.29
CSHL1-201ENST00000259003 POLR2AP24928 1970 aaKnown RBP16.87■□□□□ 0.29
CSHL1-201ENST00000259003 TMEM88BA6NKF7 163 aa16.86■□□□□ 0.29
CSHL1-201ENST00000259003 MYL6BP14649 208 aa16.85■□□□□ 0.29
CSHL1-201ENST00000259003 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
CSHL1-201ENST00000259003 CRY2Q49AN0 593 aa16.85■□□□□ 0.29
CSHL1-201ENST00000259003 SUSD4Q5VX71 490 aa16.85■□□□□ 0.29
CSHL1-201ENST00000259003 RTKN2Q8IZC4 609 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms